CD-HIT: accelerated for clustering the next-generation sequencing data
Fu, Limin, Niu, Beifang, Zhu, Zhengwei, Wu, Sitao, Li, Weizhong
Published in Bioinformatics (01.12.2012)
Published in Bioinformatics (01.12.2012)
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CD-HIT Suite: a web server for clustering and comparing biological sequences
Huang, Ying, Niu, Beifang, Gao, Ying, Fu, Limin, Li, Weizhong
Published in Bioinformatics (01.03.2010)
Published in Bioinformatics (01.03.2010)
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Journal Article
WebMGA: a customizable web server for fast metagenomic sequence analysis
Wu, Sitao, Zhu, Zhengwei, Fu, Liming, Niu, Beifang, Li, Weizhong
Published in BMC genomics (07.09.2011)
Published in BMC genomics (07.09.2011)
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Journal Article
The EMBL-EBI bioinformatics web and programmatic tools framework
Li, Weizhong, Cowley, Andrew, Uludag, Mahmut, Gur, Tamer, McWilliam, Hamish, Squizzato, Silvano, Park, Young Mi, Buso, Nicola, Lopez, Rodrigo
Published in Nucleic acids research (01.07.2015)
Published in Nucleic acids research (01.07.2015)
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Journal Article
Analysis Tool Web Services from the EMBL-EBI
McWilliam, Hamish, Li, Weizhong, Uludag, Mahmut, Squizzato, Silvano, Park, Young Mi, Buso, Nicola, Cowley, Andrew Peter, Lopez, Rodrigo
Published in Nucleic acids research (01.07.2013)
Published in Nucleic acids research (01.07.2013)
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Journal Article
Deep Learning and Its Applications in Biomedicine
Cao, Chensi, Liu, Feng, Tan, Hai, Song, Deshou, Shu, Wenjie, Li, Weizhong, Zhou, Yiming, Bo, Xiaochen, Xie, Zhi
Published in Genomics, proteomics & bioinformatics (01.02.2018)
Published in Genomics, proteomics & bioinformatics (01.02.2018)
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Journal Article
Interplay between the human gut microbiome and host metabolism
Visconti, Alessia, Le Roy, Caroline I., Rosa, Fabio, Rossi, Niccolò, Martin, Tiphaine C., Mohney, Robert P., Li, Weizhong, de Rinaldis, Emanuele, Bell, Jordana T., Venter, J. Craig, Nelson, Karen E., Spector, Tim D., Falchi, Mario
Published in Nature communications (03.10.2019)
Published in Nature communications (03.10.2019)
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Journal Article
InterProScan 5: genome-scale protein function classification
Jones, Philip, Binns, David, Chang, Hsin-Yu, Fraser, Matthew, Li, Weizhong, McAnulla, Craig, McWilliam, Hamish, Maslen, John, Mitchell, Alex, Nuka, Gift, Pesseat, Sebastien, Quinn, Antony F., Sangrador-Vegas, Amaia, Scheremetjew, Maxim, Yong, Siew-Yit, Lopez, Rodrigo, Hunter, Sarah
Published in Bioinformatics (01.05.2014)
Published in Bioinformatics (01.05.2014)
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Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
Loomba, Rohit, Seguritan, Victor, Li, Weizhong, Long, Tao, Klitgord, Niels, Bhatt, Archana, Dulai, Parambir Singh, Caussy, Cyrielle, Bettencourt, Richele, Highlander, Sarah K., Jones, Marcus B., Sirlin, Claude B., Schnabl, Bernd, Brinkac, Lauren, Schork, Nicholas, Chen, Chi-Hua, Brenner, David A., Biggs, William, Yooseph, Shibu, Venter, J. Craig, Nelson, Karen E.
Published in Cell metabolism (02.05.2017)
Published in Cell metabolism (02.05.2017)
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A drought-induced pervasive increase in tree mortality across Canada's boreal forests
Peng, Changhui, Ma, Zhihai, Lei, Xiangdong, Zhu, Qiuan, Chen, Huai, Wang, Weifeng, Liu, Shirong, Li, Weizhong, Fang, Xiuqin, Zhou, Xiaolu
Published in Nature climate change (01.12.2011)
Published in Nature climate change (01.12.2011)
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Deep learning-based six-type classifier for lung cancer and mimics from histopathological whole slide images: a retrospective study
Yang, Huan, Chen, Lili, Cheng, Zhiqiang, Yang, Minglei, Wang, Jianbo, Lin, Chenghao, Wang, Yuefeng, Huang, Leilei, Chen, Yangshan, Peng, Sui, Ke, Zunfu, Li, Weizhong
Published in BMC medicine (29.03.2021)
Published in BMC medicine (29.03.2021)
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Journal Article
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
Sievers, Fabian, Wilm, Andreas, Dineen, David, Gibson, Toby J, Karplus, Kevin, Li, Weizhong, Lopez, Rodrigo, McWilliam, Hamish, Remmert, Michael, Söding, Johannes, Thompson, Julie D, Higgins, Desmond G
Published in Molecular systems biology (11.10.2011)
Published in Molecular systems biology (11.10.2011)
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Journal Article
Spray characteristics of pressure-swirl nozzles at different nozzle diameters
Zhang, Tao, Dong, Bo, Chen, Xiaohong, Qiu, Zhonghua, Jiang, Rui, Li, Weizhong
Published in Applied thermal engineering (05.07.2017)
Published in Applied thermal engineering (05.07.2017)
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Impact of intrapartum and postnatal antibiotics on the gut microbiome and emergence of antimicrobial resistance in infants
Tapiainen, Terhi, Koivusaari, Pirjo, Brinkac, Lauren, Lorenzi, Hernan A., Salo, Jarmo, Renko, Marjo, Pruikkonen, Hannele, Pokka, Tytti, Li, Weizhong, Nelson, Karen, Pirttilä, Anna Maria, Tejesvi, Mysore V.
Published in Scientific reports (23.07.2019)
Published in Scientific reports (23.07.2019)
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