OpenCustomDB: Integration of Unannotated Open Reading Frames and Genetic Variants to Generate More Comprehensive Customized Protein Databases
Guilloy, Noé, Brunet, Marie A., Leblanc, Sébastien, Jacques, Jean-François, Hardy, Marie-Pierre, Ehx, Grégory, Lanoix, Joël, Thibault, Pierre, Perreault, Claude, Roucou, Xavier
Published in Journal of proteome research (05.05.2023)
Published in Journal of proteome research (05.05.2023)
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Comparison of the MHC I Immunopeptidome Repertoire of B‐Cell Lymphoblasts Using Two Isolation Methods
Lanoix, Joël, Durette, Chantal, Courcelles, Mathieu, Cossette, Émilie, Comtois‐Marotte, Simon, Hardy, Marie‐Pierre, Côté, Caroline, Perreault, Claude, Thibault, Pierre
Published in Proteomics (Weinheim) (01.06.2018)
Published in Proteomics (Weinheim) (01.06.2018)
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Breast cancer immunopeptidomes contain numerous shared tumor antigens
Kina, Eralda, Laverdure, Jean-Philippe, Durette, Chantal, Lanoix, Joël, Courcelles, Mathieu, Zhao, Qingchuan, Apavaloaei, Anca, Larouche, Jean-David, Hardy, Marie-Pierre, Vincent, Krystel, Gendron, Patrick, Hesnard, Leslie, Thériault, Catherine, Ruiz Cuevas, Maria Virginia, Ehx, Grégory, Thibault, Pierre, Perreault, Claude
Published in The Journal of clinical investigation (01.01.2024)
Published in The Journal of clinical investigation (01.01.2024)
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Autophagy degrades immunogenic endogenous retroelements induced by 5-azacytidine in acute myeloid leukemia
Noronha, Nandita, Durette, Chantal, Cahuzac, Maxime, E Silva, Bianca, Courtois, Justine, Humeau, Juliette, Sauvat, Allan, Hardy, Marie-Pierre, Vincent, Krystel, Laverdure, Jean-Philippe, Lanoix, Joël, Baron, Frédéric, Thibault, Pierre, Perreault, Claude, Ehx, Gregory
Published in Leukemia (01.05.2024)
Published in Leukemia (01.05.2024)
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Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer
Zhao, Qingchuan, Laverdure, Jean-Philippe, Lanoix, Joël, Durette, Chantal, Côté, Caroline, Bonneil, Éric, Laumont, Céline M, Gendron, Patrick, Vincent, Krystel, Courcelles, Mathieu, Lemieux, Sébastien, Millar, Douglas G, Ohashi, Pamela S, Thibault, Pierre, Perreault, Claude
Published in Cancer immunology research (01.04.2020)
Published in Cancer immunology research (01.04.2020)
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H3.3 G34W Promotes Growth and Impedes Differentiation of Osteoblast-Like Mesenchymal Progenitors in Giant Cell Tumor of Bone
Khazaei, Sima, De Jay, Nicolas, Deshmukh, Shriya, Hendrikse, Liam D, Jawhar, Wajih, Chen, Carol C L, Mikael, Leonie G, Faury, Damien, Marchione, Dylan M, Lanoix, Joel, Bonneil, Éric, Ishii, Takeaki, Jain, Siddhant U, Rossokhata, Kateryna, Sihota, Tianna S, Eveleigh, Robert, Lisi, Véronique, Harutyunyan, Ashot S, Jung, Sungmi, Karamchandani, Jason, Dickson, Brendan C, Turcotte, Robert, Wunder, Jay S, Thibault, Pierre, Lewis, Peter W, Garcia, Benjamin A, Mack, Stephen C, Taylor, Michael D, Garzia, Livia, Kleinman, Claudia L, Jabado, Nada
Published in Cancer discovery (01.12.2020)
Published in Cancer discovery (01.12.2020)
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Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers
Apavaloaei, Anca, Hesnard, Leslie, Hardy, Marie-Pierre, Benabdallah, Basma, Ehx, Gregory, Thériault, Catherine, Laverdure, Jean-Philippe, Durette, Chantal, Lanoix, Joël, Courcelles, Mathieu, Noronha, Nandita, Chauhan, Kapil Dev, Lemieux, Sébastien, Beauséjour, Christian, Bhatia, Mick, Thibault, Pierre, Perreault, Claude
Published in Cell reports (Cambridge) (16.08.2022)
Published in Cell reports (Cambridge) (16.08.2022)
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Transposable elements regulate thymus development and function
Larouche, Jean-David, Laumont, Céline M, Trofimov, Assya, Vincent, Krystel, Hesnard, Leslie, Brochu, Sylvie, Côté, Caroline, Humeau, Juliette F, Bonneil, Éric, Lanoix, Joel, Durette, Chantal, Gendron, Patrick, Laverdure, Jean-Philippe, Richie, Ellen R, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude
Published in eLife (18.04.2024)
Published in eLife (18.04.2024)
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Cdc42 and Rac1 activity is reduced in human pheochromocytoma and correlates with FARP1 and ARHGEF1 expression
Croisé, Pauline, Houy, Sébastien, Gand, Mathieu, Lanoix, Joël, Calco, Valérie, Tóth, Petra, Brunaud, Laurent, Lomazzi, Sandra, Paramithiotis, Eustache, Chelsky, Daniel, Ory, Stéphane, Gasman, Stéphane
Published in Endocrine-related cancer (01.04.2016)
Published in Endocrine-related cancer (01.04.2016)
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Proteomic analysis of the transitional endoplasmic reticulum in hepatocellular carcinoma: An organelle perspective on cancer
Roy, Line, LaBoissière, Sylvie, Abdou, Eman, Thibault, Geneviève, Hamel, Nathalie, Taheri, Maryam, Boismenu, Daniel, Lanoix, Joël, Kearney, Robert E., Paiement, Jacques
Published in Biochimica et biophysica acta (01.09.2010)
Published in Biochimica et biophysica acta (01.09.2010)
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Noncoding regions are the main source of targetable tumor-specific antigens
Laumont, Céline M, Vincent, Krystel, Hesnard, Leslie, Audemard, Éric, Bonneil, Éric, Laverdure, Jean-Philippe, Gendron, Patrick, Courcelles, Mathieu, Hardy, Marie-Pierre, Côté, Caroline, Durette, Chantal, St-Pierre, Charles, Benhammadi, Mohamed, Lanoix, Joël, Vobecky, Suzanne, Haddad, Elie, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude
Published in Science translational medicine (05.12.2018)
Published in Science translational medicine (05.12.2018)
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Most non-canonical proteins uniquely populate the proteome or immunopeptidome
Ruiz Cuevas, Maria Virginia, Hardy, Marie-Pierre, Hollý, Jaroslav, Bonneil, Éric, Durette, Chantal, Courcelles, Mathieu, Lanoix, Joël, Côté, Caroline, Staudt, Louis M., Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude, Yewdell, Jonathan W.
Published in Cell reports (Cambridge) (09.03.2021)
Published in Cell reports (Cambridge) (09.03.2021)
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Atypical acute myeloid leukemia-specific transcripts generate shared and immunogenic MHC class-I-associated epitopes
Ehx, Grégory, Larouche, Jean-David, Durette, Chantal, Laverdure, Jean-Philippe, Hesnard, Leslie, Vincent, Krystel, Hardy, Marie-Pierre, Thériault, Catherine, Rulleau, Caroline, Lanoix, Joël, Bonneil, Eric, Feghaly, Albert, Apavaloaei, Anca, Noronha, Nandita, Laumont, Céline M., Delisle, Jean-Sébastien, Vago, Luca, Hébert, Josée, Sauvageau, Guy, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude
Published in Immunity (Cambridge, Mass.) (13.04.2021)
Published in Immunity (Cambridge, Mass.) (13.04.2021)
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Taking organelles apart, putting them back together and creating new ones: Lessons from the endoplasmic reticulum
Lavoie, Christine, Roy, Line, Lanoix, Joël, Taheri, Mariam, Young, Robin, Thibault, Geneviève, Farah, Carol Abi, Leclerc, Nicole, Paiement, Jacques
Published in Progress in histochemistry and cytochemistry (01.06.2011)
Published in Progress in histochemistry and cytochemistry (01.06.2011)
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Immunogenicity of Non-Mutated Ovarian Cancer-Specific Antigens
Hesnard, Leslie, Thériault, Catherine, Cahuzac, Maxime, Durette, Chantal, Vincent, Krystel, Hardy, Marie-Pierre, Lanoix, Joël, Lavallée, Gabriel Ouellet, Humeau, Juliette, Thibault, Pierre, Perreault, Claude
Published in Current oncology (Toronto) (01.06.2024)
Published in Current oncology (Toronto) (01.06.2024)
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MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets
Kovalchik, Kevin A., Ma, Qing, Wessling, Laura, Saab, Frederic, Duquette, Jérôme D., Kubiniok, Peter, Hamelin, David J., Faridi, Pouya, Li, Chen, Purcell, Anthony W., Jang, Anne, Paramithiotis, Eustache, Tognetti, Marco, Reiter, Lukas, Bruderer, Roland, Lanoix, Joël, Bonneil, Éric, Courcelles, Mathieu, Thibault, Pierre, Caron, Etienne, Sirois, Isabelle
Published in Molecular & cellular proteomics (01.01.2022)
Published in Molecular & cellular proteomics (01.01.2022)
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Dysfunction of calcium-regulated exocytosis at a single-cell level causes catecholamine hypersecretion in patients with pheochromocytoma
Houy, Sébastien, Streit, Laura, Drissa, Inès, Rame, Marion, Decraene, Charles, Moog, Sophie, Brunaud, Laurent, Lanoix, Joël, Chelbi, Rabie, Bihain, Florence, Lacomme, Stéphanie, Lomazzi, Sandra, Campoli, Philippe, Vix, Michel, Mutter, Didier, Paramithiotis, Eustache, Dubessy, Christophe, Vitale, Nicolas, Ory, Stéphane, Gasman, Stéphane
Published in Cancer letters (01.09.2022)
Published in Cancer letters (01.09.2022)
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Isolation of Human Prostatic Epithelial Plasma Membranes for Proteomics Using Mirror Image Tissue Banking of Radical Prostatectomy Specimens
SIRCAR, Kanishka, GABOURY, Louis, MILETTI, Tina, LANOIX, Joel, OUADI, Lydia, MECTEAU, Melanie, SCARLATA, Eleonora, SAAD, Fred, APRIKIAN, Armen, TANGUAY, Simon, LAPOINTE, Steven, LUSSIER, Christian
Published in Clinical cancer research (15.07.2006)
Published in Clinical cancer research (15.07.2006)
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Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling
Pfammatter, Sibylle, Bonneil, Eric, Lanoix, Joel, Vincent, Krystel, Hardy, Marie-Pierre, Courcelles, Mathieu, Perreault, Claude, Thibault, Pierre
Published in Analytical chemistry (Washington) (07.07.2020)
Published in Analytical chemistry (Washington) (07.07.2020)
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Immunopeptidomic Analyses of Colorectal Cancers With and Without Microsatellite Instability
Cleyle, Jenna, Hardy, Marie-Pierre, Minati, Robin, Courcelles, Mathieu, Durette, Chantal, Lanoix, Joel, Laverdure, Jean-Philippe, Vincent, Krystel, Perreault, Claude, Thibault, Pierre
Published in Molecular & cellular proteomics (01.05.2022)
Published in Molecular & cellular proteomics (01.05.2022)
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