Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens
Herry, Florian, Hérault, Frédéric, Lecerf, Frédéric, Lagoutte, Laëtitia, Doublet, Mathilde, Picard-Druet, David, Bardou, Philippe, Varenne, Amandine, Burlot, Thierry, Le Roy, Pascale, Allais, Sophie
Published in BMC genomics (19.05.2023)
Published in BMC genomics (19.05.2023)
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PNPLA1 mutations cause autosomal recessive congenital ichthyosis in golden retriever dogs and humans
Grall, Anaïs, Guaguère, Eric, Planchais, Sandrine, Grond, Susanne, Bourrat, Emmanuelle, Hausser, Ingrid, Hitte, Christophe, Le Gallo, Matthieu, Derbois, Céline, Kim, Gwang-Jin, Lagoutte, Laëtitia, Degorce-Rubiales, Frédérique, Radner, Franz P W, Thomas, Anne, Küry, Sébastien, Bensignor, Emmanuel, Fontaine, Jacques, Pin, Didier, Zimmermann, Robert, Zechner, Rudolf, Lathrop, Mark, Galibert, Francis, André, Catherine, Fischer, Judith
Published in Nature genetics (01.02.2012)
Published in Nature genetics (01.02.2012)
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Journal Article
Canine neuropathies: powerful spontaneous models for human hereditary sensory neuropathies
Correard, Solenne, Plassais, Jocelyn, Lagoutte, Laëtitia, Botherel, Nadine, Thibaud, Jean-Laurent, Hédan, Benoît, Richard, Laurence, Lia, Anne-Sophie, Delague, Valérie, Mège, Catherine, Mathis, Stéphane, Guaguère, Eric, Paradis, Manon, Vallat, Jean-Michel, Quignon, Pascale, André, Catherine
Published in Human genetics (01.05.2019)
Published in Human genetics (01.05.2019)
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Journal Article
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome
Wucher, Valentin, Legeai, Fabrice, Hédan, Benoît, Rizk, Guillaume, Lagoutte, Lætitia, Leeb, Tosso, Jagannathan, Vidhya, Cadieu, Edouard, David, Audrey, Lohi, Hannes, Cirera, Susanna, Fredholm, Merete, Botherel, Nadine, Leegwater, Peter A J, Le Béguec, Céline, Fieten, Hille, Johnson, Jeremy, Alföldi, Jessica, André, Catherine, Lindblad-Toh, Kerstin, Hitte, Christophe, Derrien, Thomas
Published in Nucleic acids research (05.05.2017)
Published in Nucleic acids research (05.05.2017)
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Journal Article
Variant calling and genotyping accuracy of ddRAD-seq: Comparison with 20X WGS in layers
Doublet, Mathilde, Degalez, Fabien, Lagarrigue, Sandrine, Lagoutte, Laetitia, Gueret, Elise, Allais, Sophie, Lecerf, Frédéric
Published in PloS one (26.07.2024)
Published in PloS one (26.07.2024)
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Journal Article
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Jehl, Frédéric, Muret, Kévin, Bernard, Maria, Boutin, Morgane, Lagoutte, Laetitia, Désert, Colette, Dehais, Patrice, Esquerré, Diane, Acloque, Hervé, Giuffra, Elisabetta, Djebali, Sarah, Foissac, Sylvain, Derrien, Thomas, Pitel, Frédérique, Zerjal, Tatiana, Klopp, Christophe, Lagarrigue, Sandrine
Published in Scientific reports (24.11.2020)
Published in Scientific reports (24.11.2020)
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Journal Article
Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues
Degalez, Fabien, Charles, Mathieu, Foissac, Sylvain, Zhou, Haijuan, Guan, Dailu, Fang, Lingzhao, Klopp, Christophe, Allain, Coralie, Lagoutte, Laetitia, Lecerf, Frédéric, Acloque, Hervé, Giuffra, Elisabetta, Pitel, Frédérique, Lagarrigue, Sandrine
Published in Scientific reports (19.03.2024)
Published in Scientific reports (19.03.2024)
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Journal Article
Characterisation and functional predictions of canine long non-coding RNAs
Le Béguec, Céline, Wucher, Valentin, Lagoutte, Lætitia, Cadieu, Edouard, Botherel, Nadine, Hédan, Benoît, De Brito, Clotilde, Guillory, Anne-Sophie, André, Catherine, Derrien, Thomas, Hitte, Christophe
Published in Scientific reports (07.09.2018)
Published in Scientific reports (07.09.2018)
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Journal Article
Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Jehl, Frédéric, Muret, Kévin, Bernard, Maria, Boutin, Morgane, Lagoutte, Laetitia, Désert, Colette, Dehais, Patrice, Esquerré, Diane, Acloque, Hervé, Giuffra, Elisabetta, Djebali, Sarah, Foissac, Sylvain, Derrien, Thomas, Pitel, Frédérique, Zerjal, Tatiana, Klopp, Christophe, Lagarrigue, Sandrine
Published in Scientific reports (28.04.2021)
Published in Scientific reports (28.04.2021)
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Journal Article
RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and Cis-Regulation Analysis by Allele-Specific Expression in Livestock Species
Jehl, Frédéric, Degalez, Fabien, Bernard, Maria, Lecerf, Frédéric, Lagoutte, Laetitia, Désert, Colette, Coulée, Manon, Bouchez, Olivier, Leroux, Sophie, Abasht, Behnam, Tixier-Boichard, Michèle, Bed’hom, Bertrand, Burlot, Thierry, Gourichon, David, Bardou, Philippe, Acloque, Hervé, Foissac, Sylvain, Djebali, Sarah, Giuffra, Elisabetta, Zerjal, Tatiana, Pitel, Frédérique, Klopp, Christophe, Lagarrigue, Sandrine
Published in Frontiers in genetics (28.06.2021)
Published in Frontiers in genetics (28.06.2021)
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Journal Article
Discovery of Human-Similar Gene Fusions in Canine Cancers
Ulvé, Ronan, Rault, Mélanie, Bahin, Mathieu, Lagoutte, Laetitia, Abadie, Jérôme, De Brito, Clotilde, Coindre, Jean-Michel, Botherel, Nadine, Rousseau, Audrey, Wucher, Valentin, Cadieu, Edouard, Thieblemont, Catherine, Hitte, Christophe, Cornevin, Laurence, Cabillic, Florian, Bachelot, Laura, Gilot, David, Hennuy, Benoit, Guillaudeux, Thierry, Le Goff, Arnaud, Derrien, Thomas, Hédan, Benoît, André, Catherine
Published in Cancer research (Chicago, Ill.) (01.11.2017)
Published in Cancer research (Chicago, Ill.) (01.11.2017)
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Journal Article
A Point Mutation in a lincRNA Upstream of GDNF Is Associated to a Canine Insensitivity to Pain: A Spontaneous Model for Human Sensory Neuropathies
Plassais, Jocelyn, Lagoutte, Laetitia, Correard, Solenne, Paradis, Manon, Guaguère, Eric, Hédan, Benoit, Pommier, Alix, Botherel, Nadine, Cadiergues, Marie-Christine, Pilorge, Philippe, Silversides, David, Bizot, Maud, Samuels, Mark, Arnan, Carme, Johnson, Rory, Hitte, Christophe, Salbert, Gilles, Méreau, Agnès, Quignon, Pascale, Derrien, Thomas, André, Catherine
Published in PLoS genetics (01.12.2016)
Published in PLoS genetics (01.12.2016)
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Journal Article
Watch Out for a Second SNP: Focus on Multi-Nucleotide Variants in Coding Regions and Rescued Stop-Gained
Degalez, Fabien, Jehl, Frédéric, Muret, Kévin, Bernard, Maria, Lecerf, Frédéric, Lagoutte, Laetitia, Désert, Colette, Pitel, Frédérique, Klopp, Christophe, Lagarrigue, Sandrine
Published in Frontiers in genetics (07.07.2021)
Published in Frontiers in genetics (07.07.2021)
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Journal Article
Amy2B copy number variation reveals starch diet adaptations in ancient European dogs
Ollivier, Morgane, Tresset, Anne, Bastian, Fabiola, Lagoutte, Laetitia, Axelsson, Erik, Arendt, Maja-Louise, Bălăşescu, Adrian, Marshour, Marjan, Sablin, Mikhail V., Salanova, Laure, Vigne, Jean-Denis, Hitte, Christophe, Hänni, Catherine
Published in Royal Society open science (01.11.2016)
Published in Royal Society open science (01.11.2016)
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Journal Article
Evidence of coat color variation sheds new light on ancient canids
Ollivier, Morgane, Tresset, Anne, Hitte, Christophe, Petit, Coraline, Hughes, Sandrine, Gillet, Benjamin, Duffraisse, Marilyne, Pionnier-Capitan, Maud, Lagoutte, Laetitia, Arbogast, Rose-Marie, Balasescu, Adrian, Boroneant, Adina, Mashkour, Marjan, Vigne, Jean-Denis, Hänni, Catherine
Published in PloS one (02.10.2013)
Published in PloS one (02.10.2013)
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Journal Article
Adenine nucleotide translocator promotes oxidative phosphorylation and mild uncoupling in mitochondria after dexamethasone treatment
Arvier, Matthieu, Lagoutte, Laetitia, Johnson, Gyasi, Dumas, Jean-Francois, Sion, Benoit, Grizard, Genevieve, Malthiery, Yves, Simard, Gilles, Ritz, Patrick
Published in American journal of physiology: endocrinology and metabolism (01.11.2007)
Published in American journal of physiology: endocrinology and metabolism (01.11.2007)
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Journal Article
Comparison of buccal and blood-derived canine DNA, either native or whole genome amplified, for array-based genome-wide association studies
Rincon, Gonzalo, Tengvall, Katarina, Belanger, Janelle M, Lagoutte, Laetitia, Medrano, Juan F, André, Catherine, Thomas, Anne, Lawley, Cynthia Taylor, Hansen, Mark St, Lindblad-Toh, Kerstin, Oberbauer, Anita M
Published in BMC research notes (30.06.2011)
Published in BMC research notes (30.06.2011)
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Journal Article
Amy2B copy number variation reveals starch diet adaptation in ancient European dogs
Ollivier, Morgane, Tresset, Anne, Bastian, Fabiola, Lagoutte, Laëtitia, Axelsson, Erik, Arendt, Maja-Louise, Balasescu, Adrian, Sablin, Mikhail V., Salanova, Laure, Haenni, Catherine, Vigne, Jean-Denis, Hitte, Christophe, Mashkour, Marjan
Published in Royal Society open science (09.11.2016)
Published in Royal Society open science (09.11.2016)
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Journal Article
Natural models for retinitis pigmentosa: progressive retinal atrophy in dog breeds
Bunel, Morgane, Chaudieu, Gilles, Hamel, Christian, Lagoutte, Laetitia, Manes, Gaël, Botherel, Nadine, Brabet, Philippe, Pilorge, Philippe, André, Catherine, Quignon, Pascale
Published in Human genetics (01.05.2019)
Published in Human genetics (01.05.2019)
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