Patch-Based Convolutional Neural Network for Whole Slide Tissue Image Classification
Le Hou, Samaras, Dimitris, Kurc, Tahsin M., Yi Gao, Davis, James E., Saltz, Joel H.
Published in 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR) (01.06.2016)
Published in 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR) (01.06.2016)
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Conference Proceeding
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Robust Histopathology Image Analysis: To Label or to Synthesize?
Hou, Le, Agarwal, Ayush, Samaras, Dimitris, Kurc, Tahsin M., Gupta, Rajarsi R., Saltz, Joel H.
Published in 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) (01.06.2019)
Published in 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) (01.06.2019)
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A Methodology for Texture Feature-based Quality Assessment in Nucleus Segmentation of Histopathology Image
Wen, Si, Kurc, Tahsin M., Gao, Yi, Zhao, Tianhao, Saltz, Joel H., Zhu, Wei
Published in Journal of pathology informatics (01.01.2017)
Published in Journal of pathology informatics (01.01.2017)
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Journal Article
Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images
Hou, Le, Nguyen, Vu, Kanevsky, Ariel B., Samaras, Dimitris, Kurc, Tahsin M., Zhao, Tianhao, Gupta, Rajarsi R., Gao, Yi, Chen, Wenjin, Foran, David, Saltz, Joel H.
Published in Pattern recognition (01.02.2019)
Published in Pattern recognition (01.02.2019)
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Journal Article
ChampKit: A framework for rapid evaluation of deep neural networks for patch-based histopathology classification
Kaczmarzyk, Jakub R., Gupta, Rajarsi, Kurc, Tahsin M., Abousamra, Shahira, Saltz, Joel H., Koo, Peter K.
Published in Computer methods and programs in biomedicine (01.09.2023)
Published in Computer methods and programs in biomedicine (01.09.2023)
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Journal Article
Dataset of segmented nuclei in hematoxylin and eosin stained histopathology images of ten cancer types
Hou, Le, Gupta, Rajarsi, Van Arnam, John S., Zhang, Yuwei, Sivalenka, Kaustubh, Samaras, Dimitris, Kurc, Tahsin M., Saltz, Joel H.
Published in Scientific data (19.06.2020)
Published in Scientific data (19.06.2020)
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Journal Article
Digital Pathology: Data-Intensive Frontier in Medical Imaging
Cooper, Lee A. D., Sharma, Ashish, Kurc, Tahsin M., Brat, Daniel J., Saltz, Joel H., Carter, Alexis B., Farris, Alton B., Wang, Fusheng, Kong, Jun, Gutman, David A., Widener, Patrick, Pan, Tony C., Cholleti, Sharath R.
Published in Proceedings of the IEEE (01.04.2012)
Published in Proceedings of the IEEE (01.04.2012)
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Journal Article
Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes
Kong, Jun, Kurc, Tahsin M., Moreno, Carlos S., Saltz, Joel H., Brat, Daniel J., Cooper, Lee A. D., Wang, Fusheng, Gutman, David A., Gao, Jingjing, Chisolm, Candace, Sharma, Ashish, Pan, Tony, Van Meir, Erwin G.
Published in IEEE transactions on biomedical engineering (01.12.2011)
Published in IEEE transactions on biomedical engineering (01.12.2011)
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GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows
Pati, Sarthak, Thakur, Siddhesh P., Hamamcı, İbrahim Ethem, Baid, Ujjwal, Baheti, Bhakti, Bhalerao, Megh, Güley, Orhun, Mouchtaris, Sofia, Lang, David, Thermos, Spyridon, Gotkowski, Karol, González, Camila, Grenko, Caleb, Getka, Alexander, Edwards, Brandon, Sheller, Micah, Wu, Junwen, Karkada, Deepthi, Panchumarthy, Ravi, Ahluwalia, Vinayak, Zou, Chunrui, Bashyam, Vishnu, Li, Yuemeng, Haghighi, Babak, Chitalia, Rhea, Abousamra, Shahira, Kurc, Tahsin M., Gastounioti, Aimilia, Er, Sezgin, Bergman, Mark, Saltz, Joel H., Fan, Yong, Shah, Prashant, Mukhopadhyay, Anirban, Tsaftaris, Sotirios A., Menze, Bjoern, Davatzikos, Christos, Kontos, Despina, Karargyris, Alexandros, Umeton, Renato, Mattson, Peter, Bakas, Spyridon
Published in Communications engineering (16.05.2023)
Published in Communications engineering (16.05.2023)
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Journal Article
An Integrative Approach for In Silico Glioma Research
Cooper, Lee A. D., Flanders, Adam E., Rubin, Daniel L., Meir, Erwin G. Van, Kurc, Tahsin M., Moreno, Carlos S., Brat, Daniel J., Saltz, Joel H., Kong, Jun, Gutman, David A., Wang, Fusheng, Cholleti, Sharath R., Pan, Tony C., Widener, Patrick M., Sharma, Ashish, Mikkelsen, Tom
Published in IEEE transactions on biomedical engineering (01.10.2010)
Published in IEEE transactions on biomedical engineering (01.10.2010)
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Journal Article
Comparison of Different Classifiers with Active Learning to Support Quality Control in Nucleus Segmentation in Pathology Images
Wen, Si, Kurc, Tahsin M, Hou, Le, Saltz, Joel H, Gupta, Rajarsi R, Batiste, Rebecca, Zhao, Tianhao, Nguyen, Vu, Samaras, Dimitris, Zhu, Wei
Published in AMIA Summits on Translational Science proceedings (2018)
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Published in AMIA Summits on Translational Science proceedings (2018)
Journal Article
Feature-based Analysis of Large-scale Spatio-Temporal Sensor Data on Hybrid Architectures
Saltz, Joel, Teodoro, George, Pan, Tony, Cooper, Lee, Kong, Jun, Klasky, Scott, Kurc, Tahsin
Published in The international journal of high performance computing applications (01.08.2013)
Published in The international journal of high performance computing applications (01.08.2013)
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Journal Article
Center-Focusing Multi-task CNN with Injected Features for Classification of Glioma Nuclear Images
Murthy, Veda, Le Hou, Samaras, Dimitris, Kurc, Tahsin M., Saltz, Joel H.
Published in 2017 IEEE Winter Conference on Applications of Computer Vision (WACV) (01.03.2017)
Published in 2017 IEEE Winter Conference on Applications of Computer Vision (WACV) (01.03.2017)
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Conference Proceeding
Journal Article
Informatics in radiology: GridCAD: grid-based computer-aided detection system
Pan, Tony C, Gurcan, Metin N, Langella, Stephen A, Oster, Scott W, Hastings, Shannon L, Sharma, Ashish, Rutt, Benjamin G, Ervin, David W, Kurc, Tahsin M, Siddiqui, Khan M, Saltz, Joel H, Siegel, Eliot L
Published in Radiographics (01.05.2007)
Published in Radiographics (01.05.2007)
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Journal Article
ConvNets with Smooth Adaptive Activation Functions for Regression
Hou, Le, Samaras, Dimitris, Kurc, Tahsin M, Gao, Yi, Saltz, Joel H
Published in Proceedings of machine learning research (01.04.2017)
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Published in Proceedings of machine learning research (01.04.2017)
Journal Article
Increasing Accuracy of Medical CNN Applying Optimization Algorithms: An Image Classification Case
Marconi Ramos, Rafael, Ghedini Ralha, Celia, Kurc, Tahsin M., Saltz, Joel H., Teodoro, George
Published in 2019 8th Brazilian Conference on Intelligent Systems (BRACIS) (01.10.2019)
Published in 2019 8th Brazilian Conference on Intelligent Systems (BRACIS) (01.10.2019)
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Conference Proceeding
A caGrid-enabled, learning based image segmentation method for histopathology specimens
Foran, D.J., Lin Yang, Tuzel, O., Wenjin Chen, Jun Hu, Kurc, T.M., Ferreira, R., Saltz, J.H.
Published in 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro (01.07.2009)
Published in 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro (01.07.2009)
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