Statistical Analysis of MPSS Measurements: Application to the Study of LPS-Activated Macrophage Gene Expression
Stolovitzky, G. A., Kundaje, A., Held, G. A., Duggar, K. H., Haudenschild, C. D., Zhou, D., Vasicek, T. J., Smith, K. D., Aderem, A., Roach, J. C., Cantor, Charles R.
Published in Proceedings of the National Academy of Sciences - PNAS (01.02.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (01.02.2005)
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Journal Article
Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers
Onengut-Gumuscu, Suna, Chen, Wei-Min, Burren, Oliver, Cooper, Nick J, Quinlan, Aaron R, Mychaleckyj, Josyf C, Farber, Emily, Bonnie, Jessica K, Szpak, Michal, Schofield, Ellen, Achuthan, Premanand, Guo, Hui, Fortune, Mary D, Stevens, Helen, Walker, Neil M, Ward, Lucas D, Kundaje, Anshul, Kellis, Manolis, Daly, Mark J, Barrett, Jeffrey C, Cooper, Jason D, Deloukas, Panos, Todd, John A, Wallace, Chris, Concannon, Patrick, Rich, Stephen S
Published in Nature genetics (01.04.2015)
Published in Nature genetics (01.04.2015)
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Journal Article
Single-nucleus chromatin accessibility profiling highlights regulatory mechanisms of coronary artery disease risk
Turner, Adam W., Hu, Shengen Shawn, Mosquera, Jose Verdezoto, Ma, Wei Feng, Hodonsky, Chani J., Wong, Doris, Auguste, Gaëlle, Song, Yipei, Sol-Church, Katia, Farber, Emily, Kundu, Soumya, Kundaje, Anshul, Lopez, Nicolas G., Ma, Lijiang, Ghosh, Saikat Kumar B., Onengut-Gumuscu, Suna, Ashley, Euan A., Quertermous, Thomas, Finn, Aloke V., Leeper, Nicholas J., Kovacic, Jason C., Björkegren, Johan L. M., Zang, Chongzhi, Miller, Clint L.
Published in Nature genetics (01.06.2022)
Published in Nature genetics (01.06.2022)
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Journal Article
Opportunities and challenges for transcriptome-wide association studies
Wainberg, Michael, Sinnott-Armstrong, Nasa, Mancuso, Nicholas, Barbeira, Alvaro N., Knowles, David A., Golan, David, Ermel, Raili, Ruusalepp, Arno, Quertermous, Thomas, Hao, Ke, Björkegren, Johan L. M., Im, Hae Kyung, Pasaniuc, Bogdan, Rivas, Manuel A., Kundaje, Anshul
Published in Nature genetics (29.03.2019)
Published in Nature genetics (29.03.2019)
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Journal Article
Genetic risk impacts the association of menopausal hormone therapy with colorectal cancer risk
Tian, Yu, Lin, Yi, Qu, Conghui, Arndt, Volker, Baurley, James W., Berndt, Sonja I., Bien, Stephanie A., Bishop, D. Timothy, Brenner, Hermann, Buchanan, Daniel D., Budiarto, Arif, Campbell, Peter T., Carreras-Torres, Robert, Casey, Graham, Chan, Andrew T., Chen, Rui, Chen, Xuechen, Conti, David V., Díez-Obrero, Virginia, Dimou, Niki, Drew, David A., Figueiredo, Jane C., Gallinger, Steven, Giles, Graham G., Gruber, Stephen B., Gunter, Marc J., Harlid, Sophia, Harrison, Tabitha A., Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R., Jenkins, Mark A., Jordahl, Kristina M., Joshi, Amit D., Keku, Temitope O., Kawaguchi, Eric, Kim, Andre E., Kundaje, Anshul, Larsson, Susanna C., Marchand, Loic Le, Lewinger, Juan Pablo, Li, Li, Moreno, Victor, Morrison, John, Murphy, Neil, Nan, Hongmei, Nassir, Rami, Newcomb, Polly A., Obón-Santacana, Mireia, Ogino, Shuji, Ose, Jennifer, Pardamean, Bens, Pellatt, Andrew J., Peoples, Anita R., Platz, Elizabeth A., Potter, John D., Prentice, Ross L., Rennert, Gad, Ruiz-Narvaez, Edward A., Sakoda, Lori C., Schoen, Robert E., Shcherbina, Anna, Stern, Mariana C., Su, Yu-Ru, Thibodeau, Stephen N., Thomas, Duncan C., Tsilidis, Konstantinos K., van Duijnhoven, Franzel J. B., Van Guelpen, Bethany, Visvanathan, Kala, White, Emily, Wolk, Alicja, Woods, Michael O., Wu, Anna H., Peters, Ulrike, Gauderman, W. James, Hsu, Li, Chang-Claude, Jenny
Published in British journal of cancer (01.06.2024)
Published in British journal of cancer (01.06.2024)
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Journal Article
A Genetic Locus within the FMN1/GREM1 Gene Region Interacts with Body Mass Index in Colorectal Cancer Risk
Aglago, Elom K, Kim, Andre, Lin, Yi, Qu, Conghui, Evangelou, Marina, Ren, Yu, Morrison, John, Albanes, Demetrius, Arndt, Volker, Barry, Elizabeth L, Baurley, James W, Berndt, Sonja I, Bien, Stephanie A, Bishop, D Timothy, Bouras, Emmanouil, Brenner, Hermann, Buchanan, Daniel D, Budiarto, Arif, Carreras-Torres, Robert, Casey, Graham, Cenggoro, Tjeng Wawan, Chan, Andrew T, Chang-Claude, Jenny, Chen, Xuechen, Conti, David V, Devall, Matthew, Diez-Obrero, Virginia, Dimou, Niki, Drew, David, Figueiredo, Jane C, Gallinger, Steven, Giles, Graham G, Gruber, Stephen B, Gsur, Andrea, Gunter, Marc J, Hampel, Heather, Harlid, Sophia, Hidaka, Akihisa, Harrison, Tabitha A, Hoffmeister, Michael, Huyghe, Jeroen R, Jenkins, Mark A, Jordahl, Kristina, Joshi, Amit D, Kawaguchi, Eric S, Keku, Temitope O, Kundaje, Anshul, Larsson, Susanna C, Marchand, Loic Le, Lewinger, Juan Pablo, Li, Li, Lynch, Brigid M, Mahesworo, Bharuno, Mandic, Marko, Obón-Santacana, Mireia, Moreno, Victor, Murphy, Neil, Nan, Hongmei, Nassir, Rami, Newcomb, Polly A, Ogino, Shuji, Ose, Jennifer, Pai, Rish K, Palmer, Julie R, Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R, Platz, Elizabeth A, Potter, John D, Prentice, Ross L, Rennert, Gad, Ruiz-Narvaez, Edward, Sakoda, Lori C, Scacheri, Peter C, Schmit, Stephanie L, Schoen, Robert E, Shcherbina, Anna, Slattery, Martha L, Stern, Mariana C, Su, Yu-Ru, Tangen, Catherine M, Thibodeau, Stephen N, Thomas, Duncan C, Tian, Yu, Ulrich, Cornelia M, van Duijnhoven, Franzel Jb, Van Guelpen, Bethany, Visvanathan, Kala, Vodicka, Pavel, Wang, Jun, White, Emily, Wolk, Alicja, Woods, Michael O, Wu, Anna H, Zemlianskaia, Natalia, Hsu, Li, Gauderman, W James, Peters, Ulrike, Tsilidis, Konstantinos K, Campbell, Peter T
Published in Cancer research (Chicago, Ill.) (01.08.2023)
Published in Cancer research (Chicago, Ill.) (01.08.2023)
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Journal Article
Probing the diabetes and colorectal cancer relationship using gene – environment interaction analyses
Dimou, Niki, Kim, Andre E., Flanagan, Orlagh, Murphy, Neil, Diez-Obrero, Virginia, Shcherbina, Anna, Aglago, Elom K., Bouras, Emmanouil, Campbell, Peter T., Casey, Graham, Gallinger, Steven, Gruber, Stephen B., Jenkins, Mark A., Lin, Yi, Moreno, Victor, Ruiz-Narvaez, Edward, Stern, Mariana C., Tian, Yu, Tsilidis, Kostas K., Arndt, Volker, Barry, Elizabeth L., Baurley, James W., Berndt, Sonja I., Bézieau, Stéphane, Bien, Stephanie A., Bishop, D. Timothy, Brenner, Hermann, Budiarto, Arif, Carreras-Torres, Robert, Cenggoro, Tjeng Wawan, Chan, Andrew T., Chang-Claude, Jenny, Chanock, Stephen J., Chen, Xuechen, Conti, David V., Dampier, Christopher H., Devall, Matthew, Drew, David A., Figueiredo, Jane C., Giles, Graham G., Gsur, Andrea, Harrison, Tabitha A., Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R., Jordahl, Kristina, Kawaguchi, Eric, Keku, Temitope O., Larsson, Susanna C., Le Marchand, Loic, Lewinger, Juan Pablo, Li, Li, Mahesworo, Bharuno, Morrison, John, Newcomb, Polly A., Newton, Christina C., Obon-Santacana, Mireia, Ose, Jennifer, Pai, Rish K., Palmer, Julie R., Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R., Pharoah, Paul D. P., Platz, Elizabeth A., Potter, John D., Rennert, Gad, Scacheri, Peter C., Schoen, Robert E., Su, Yu-Ru, Tangen, Catherine M., Thibodeau, Stephen N., Thomas, Duncan C., Ulrich, Cornelia M., Um, Caroline Y., van Duijnhoven, Franzel J. B., Visvanathan, Kala, Vodicka, Pavel, Vodickova, Ludmila, White, Emily, Wolk, Alicja, Woods, Michael O., Qu, Conghui, Kundaje, Anshul, Hsu, Li, Gauderman, W. James, Gunter, Marc J., Peters, Ulrike
Published in British journal of cancer (24.08.2023)
Published in British journal of cancer (24.08.2023)
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Journal Article
Characterization of additive gene-environment interactions for colorectal cancer risk
Thomas, Claire E, Lin, Yi, Kim, Michelle, Kawaguchi, Eric S, Qu, Conghui, Um, Caroline Y, Lynch, Brigid M, Van Guelpen, Bethany, Tsilidis, Kostas, Carreras-Torres, Robert, van Duijnhoven, Franzel Jb, Sakoda, Lori C, Campbell, Peter T, Tian, Yu, Chang-Claude, Jenny, Bézieau, Stéphane, Budiarto, Arif, Palmer, Julie R, Newcomb, Polly A, Casey, Graham, Le Marchand, Loic, Giannakis, Marios, Li, Christopher I, Gsur, Andrea, Newton, Christina, Obón-Santacana, Mireia, Moreno, Victor, Vodicka, Pavel, Brenner, Hermann, Hoffmeister, Michael, Pellatt, Andrew J, Schoen, Robert E, Dimou, Niki, Murphy, Neil, Gunter, Marc J, Castellví-Bel, Sergi, Figueiredo, Jane C, Chan, Andrew T, Song, Mingyang, Li, Li, Bishop, D Timothy, Gruber, Stephen B, Baurley, James W, Bien, Stephanie A, Conti, David V, Huyghe, Jeroen R, Kundaje, Anshul, Su, Yu-Ru, Wang, Jun, Keku, Temitope O, Woods, Michael O, Berndt, Sonja I, Chanock, Stephen J, Tangen, Catherine M, Wolk, Alicja, Burnett-Hartman, Andrea, Wu, Anna H, White, Emily, Devall, Matthew A, Díez-Obrero, Virginia, Drew, David A, Giovannucci, Edward, Hidaka, Akihisa, Kim, Andre E, Lewinger, Juan Pablo, Morrison, John, Ose, Jennifer, Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R, Ruiz-Narvaez, Edward A, Shcherbina, Anna, Stern, Mariana C, Chen, Xuechen, Thomas, Duncan C, Platz, Elizabeth A, Gauderman, W James, Peters, Ulrike, Hsu, Li
Published in Epidemiology (Cambridge, Mass.) (24.09.2024)
Published in Epidemiology (Cambridge, Mass.) (24.09.2024)
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Journal Article
Genome-wide interaction analysis of folate for colorectal cancer risk
Bouras, Emmanouil, Kim, Andre E., Lin, Yi, Morrison, John, Du, Mengmeng, Albanes, Demetrius, Barry, Elizabeth L., Baurley, James W., Berndt, Sonja I., Bien, Stephanie A., Bishop, Timothy D., Brenner, Hermann, Budiarto, Arif, Burnett-Hartman, Andrea, Campbell, Peter T., Carreras-Torres, Robert, Casey, Graham, Cenggoro, Tjeng Wawan, Chan, Andrew T., Chang-Claude, Jenny, Conti, David V., Cotterchio, Michelle, Devall, Matthew, Diez-Obrero, Virginia, Dimou, Niki, Drew, David A., Figueiredo, Jane C., Giles, Graham G., Gruber, Stephen B., Gunter, Marc J., Harrison, Tabitha A., Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R., Joshi, Amit D., Kawaguchi, Eric S., Keku, Temitope O., Kundaje, Anshul, Le Marchand, Loic, Lewinger, Juan Pablo, Li, Li, Lynch, Brigid M., Mahesworo, Bharuno, Männistö, Satu, Moreno, Victor, Murphy, Neil, Newcomb, Polly A., Obón-Santacana, Mireia, Ose, Jennifer, Palmer, Julie R., Papadimitriou, Nikos, Pardamean, Bens, Pellatt, Andrew J., Peoples, Anita R., Platz, Elizabeth A., Potter, John D., Qi, Lihong, Qu, Conghui, Rennert, Gad, Ruiz-Narvaez, Edward, Sakoda, Lori C., Schmit, Stephanie L., Shcherbina, Anna, Stern, Mariana C., Su, Yu-Ru, Tangen, Catherine M., Thomas, Duncan C., Tian, Yu, Um, Caroline Y., van Duijnhoven, Franzel JB, Van Guelpen, Bethany, Visvanathan, Kala, Wang, Jun, White, Emily, Wolk, Alicja, Woods, Michael O., Ulrich, Cornelia M., Hsu, Li, Gauderman, W James, Peters, Ulrike, Tsilidis, Konstantinos K.
Published in The American journal of clinical nutrition (01.11.2023)
Published in The American journal of clinical nutrition (01.11.2023)
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Journal Article
Genome-Wide Gene-Environment Interaction Analyses to Understand the Relationship between Red Meat and Processed Meat Intake and Colorectal Cancer Risk
Stern, Mariana C, Sanchez Mendez, Joel, Kim, Andre E, Obón-Santacana, Mireia, Moratalla-Navarro, Ferran, Martín, Vicente, Moreno, Victor, Lin, Yi, Bien, Stephanie A, Qu, Conghui, Su, Yu-Ru, White, Emily, Harrison, Tabitha A, Huyghe, Jeroen R, Tangen, Catherine M, Newcomb, Polly A, Phipps, Amanda I, Thomas, Claire E, Kawaguchi, Eric S, Lewinger, Juan Pablo, Morrison, John L, Conti, David V, Wang, Jun, Thomas, Duncan C, Platz, Elizabeth A, Visvanathan, Kala, Keku, Temitope O, Newton, Christina C, Um, Caroline Y, Kundaje, Anshul, Shcherbina, Anna, Murphy, Neil, Gunter, Marc J, Dimou, Niki, Papadimitriou, Nikos, Bézieau, Stéphane, van Duijnhoven, Franzel J B, Männistö, Satu, Rennert, Gad, Wolk, Alicja, Hoffmeister, Michael, Brenner, Hermann, Chang-Claude, Jenny, Tian, Yu, Le Marchand, Loïc, Cotterchio, Michelle, Tsilidis, Konstantinos K, Bishop, D Timothy, Melaku, Yohannes Adama, Lynch, Brigid M, Buchanan, Daniel D, Ulrich, Cornelia M, Ose, Jennifer, Peoples, Anita R, Pellatt, Andrew J, Li, Li, Devall, Matthew A M, Campbell, Peter T, Albanes, Demetrius, Weinstein, Stephanie J, Berndt, Sonja I, Gruber, Stephen B, Ruiz-Narvaez, Edward, Song, Mingyang, Joshi, Amit D, Drew, David A, Petrick, Jessica L, Chan, Andrew T, Giannakis, Marios, Peters, Ulrike, Hsu, Li, Gauderman, W James
Published in Cancer epidemiology, biomarkers & prevention (01.03.2024)
Published in Cancer epidemiology, biomarkers & prevention (01.03.2024)
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Journal Article
795 Decoding regulatory sequence across skin differentiation with deep learning
Kim, D., Risca, V., Chappell, J., Shi, M., Zhao, Z., Jung, N., Chang, H., Snyder, M., Greenleaf, W., Kundaje, A., Khavari, P.
Published in Journal of investigative dermatology (01.05.2018)
Published in Journal of investigative dermatology (01.05.2018)
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Journal Article
Genome-wide Interaction Study with Smoking for Colorectal Cancer Risk Identifies Novel Genetic Loci Related to Tumor Suppression, Inflammation, and Immune Response
Carreras-Torres, Robert, Kim, Andre E, Lin, Yi, Díez-Obrero, Virginia, Bien, Stephanie A, Qu, Conghui, Wang, Jun, Dimou, Niki, Aglago, Elom K, Albanes, Demetrius, Arndt, Volker, Baurley, James W, Berndt, Sonja I, Bézieau, Stéphane, Bishop, D Timothy, Bouras, Emmanouil, Brenner, Hermann, Budiarto, Arif, Campbell, Peter T, Casey, Graham, Chan, Andrew T, Chang-Claude, Jenny, Chen, Xuechen, Conti, David V, Dampier, Christopher H, Devall, Matthew A M, Drew, David A, Figueiredo, Jane C, Gallinger, Steven, Giles, Graham G, Gruber, Stephen B, Gsur, Andrea, Gunter, Marc J, Harrison, Tabitha A, Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R, Jenkins, Mark A, Jordahl, Kristina M, Kawaguchi, Eric, Keku, Temitope O, Kundaje, Anshul, Le Marchand, Loic, Lewinger, Juan Pablo, Li, Li, Mahesworo, Bharuno, Morrison, John L, Murphy, Neil, Nan, Hongmei, Nassir, Rami, Newcomb, Polly A, Obón-Santacana, Mireia, Ogino, Shuji, Ose, Jennifer, Pai, Rish K, Palmer, Julie R, Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R, Pharoah, Paul D P, Platz, Elizabeth A, Rennert, Gad, Ruiz-Narvaez, Edward, Sakoda, Lori C, Scacheri, Peter C, Schmit, Stephanie L, Schoen, Robert E, Shcherbina, Anna, Slattery, Martha L, Stern, Mariana C, Su, Yu-Ru, Tangen, Catherine M, Thomas, Duncan C, Tian, Yu, Tsilidis, Konstantinos K, Ulrich, Cornelia M, van Duijnhoven, Fränzel J B, Van Guelpen, Bethany, Visvanathan, Kala, Vodicka, Pavel, Cenggoro, Tjeng Wawan, Weinstein, Stephanie J, White, Emily, Wolk, Alicja, Woods, Michael O, Hsu, Li, Peters, Ulrike, Moreno, Victor, Gauderman, W James
Published in Cancer epidemiology, biomarkers & prevention (06.03.2023)
Published in Cancer epidemiology, biomarkers & prevention (06.03.2023)
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Journal Article
Beyond GWAS of Colorectal Cancer: Evidence of Interaction with Alcohol Consumption and Putative Causal Variant for the 10q24.2 Region
Jordahl, Kristina M, Shcherbina, Anna, Kim, Andre E, Su, Yu-Ru, Lin, Yi, Wang, Jun, Qu, Conghui, Albanes, Demetrius, Arndt, Volker, Baurley, James W, Berndt, Sonja I, Bien, Stephanie A, Bishop, D Timothy, Bouras, Emmanouil, Brenner, Hermann, Buchanan, Daniel D, Budiarto, Arif, Campbell, Peter T, Carreras-Torres, Robert, Casey, Graham, Cenggoro, Tjeng Wawan, Chan, Andrew T, Conti, David V, Dampier, Christopher H, Devall, Matthew A, Díez-Obrero, Virginia, Dimou, Niki, Drew, David A, Figueiredo, Jane C, Gallinger, Steven, Giles, Graham G, Gruber, Stephen B, Gsur, Andrea, Gunter, Marc J, Hampel, Heather, Harlid, Sophia, Harrison, Tabitha A, Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R, Jenkins, Mark A, Joshi, Amit D, Keku, Temitope O, Larsson, Susanna C, Le Marchand, Loic, Lewinger, Juan Pablo, Li, Li, Mahesworo, Bharuno, Moreno, Victor, Morrison, John L, Murphy, Neil, Nan, Hongmei, Nassir, Rami, Newcomb, Polly A, Obón-Santacana, Mireia, Ogino, Shuji, Ose, Jennifer, Pai, Rish K, Palmer, Julie R, Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R, Pharoah, Paul D P, Platz, Elizabeth A, Potter, John D, Prentice, Ross L, Rennert, Gad, Ruiz-Narvaez, Edward, Sakoda, Lori C, Scacheri, Peter C, Schmit, Stephanie L, Schoen, Robert E, Slattery, Martha L, Stern, Mariana C, Tangen, Catherine M, Thibodeau, Stephen N, Thomas, Duncan C, Tian, Yu, Tsilidis, Konstantinos K, Ulrich, Cornelia M, van Duijnhoven, Franzel J B, Van Guelpen, Bethany, Visvanathan, Kala, Vodicka, Pavel, White, Emily, Wolk, Alicja, Woods, Michael O, Wu, Anna H, Zemlianskaia, Natalia, Chang-Claude, Jenny, Gauderman, W James, Hsu, Li, Kundaje, Anshul, Peters, Ulrike
Published in Cancer epidemiology, biomarkers & prevention (04.05.2022)
Published in Cancer epidemiology, biomarkers & prevention (04.05.2022)
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Journal Article
Genome-Wide Interaction Analysis of Genetic Variants With Menopausal Hormone Therapy for Colorectal Cancer Risk
Tian, Yu, Kim, Andre E, Bien, Stephanie A, Lin, Yi, Qu, Conghui, Harrison, Tabitha A, Carreras-Torres, Robert, Díez-Obrero, Virginia, Dimou, Niki, Drew, David A, Hidaka, Akihisa, Huyghe, Jeroen R, Jordahl, Kristina M, Morrison, John, Murphy, Neil, Obón-Santacana, Mireia, Ulrich, Cornelia M, Ose, Jennifer, Peoples, Anita R, Ruiz-Narvaez, Edward A, Shcherbina, Anna, Stern, Mariana C, Su, Yu-Ru, van Duijnhoven, Franzel J B, Arndt, Volker, Baurley, James W, Berndt, Sonja I, Bishop, D Timothy, Brenner, Hermann, Buchanan, Daniel D, Chan, Andrew T, Figueiredo, Jane C, Gallinger, Steven, Gruber, Stephen B, Harlid, Sophia, Hoffmeister, Michael, Jenkins, Mark A, Joshi, Amit D, Keku, Temitope O, Larsson, Susanna C, Le Marchand, Loic, Li, Li, Giles, Graham G, Milne, Roger L, Nan, Hongmei, Nassir, Rami, Ogino, Shuji, Budiarto, Arif, Platz, Elizabeth A, Potter, John D, Prentice, Ross L, Rennert, Gad, Sakoda, Lori C, Schoen, Robert E, Slattery, Martha L, Thibodeau, Stephen N, Van Guelpen, Bethany, Visvanathan, Kala, White, Emily, Wolk, Alicja, Woods, Michael O, Wu, Anna H, Campbell, Peter T, Casey, Graham, Conti, David V, Gunter, Marc J, Kundaje, Anshul, Lewinger, Juan Pablo, Moreno, Victor, Newcomb, Polly A, Pardamean, Bens, Thomas, Duncan C, Tsilidis, Konstantinos K, Peters, Ulrike, Gauderman, W James, Hsu, Li, Chang-Claude, Jenny
Published in JNCI : Journal of the National Cancer Institute (08.08.2022)
Published in JNCI : Journal of the National Cancer Institute (08.08.2022)
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Journal Article
Author Correction: Single-nucleus chromatin accessibility profiling highlights regulatory mechanisms of coronary artery disease risk
Turner, Adam W., Hu, Shengen Shawn, Mosquera, Jose Verdezoto, Ma, Wei Feng, Hodonsky, Chani J., Wong, Doris, Auguste, Gaëlle, Song, Yipei, Sol-Church, Katia, Farber, Emily, Kundu, Soumya, Kundaje, Anshul, Lopez, Nicolas G., Ma, Lijiang, Ghosh, Saikat Kumar B., Onengut-Gumuscu, Suna, Ashley, Euan A., Quertermous, Thomas, Finn, Aloke V., Leeper, Nicholas J., Kovacic, Jason C., Björkegren, Johan L. M., Zang, Chongzhi, Miller, Clint L.
Published in Nature genetics (01.08.2022)
Published in Nature genetics (01.08.2022)
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Journal Article
464 Dynamic and stable enhancer-promoter contacts regulate epidermal terminal differentiation
Lopez-Pajares, V., Rubin, A., Barajas, B., Furlan-Magaril, M., Mumbach, M., Greenleaf, W., Kundaje, A., Snyder, M., Chang, H., Fraser, P., Khavari, P.A.
Published in Journal of investigative dermatology (01.05.2017)
Published in Journal of investigative dermatology (01.05.2017)
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Journal Article
Predicting genetic regulatory response using classification
Middendorf, Manuel, Kundaje, Anshul, Wiggins, Chris, Freund, Yoav, Leslie, Christina
Published in Bioinformatics (04.08.2004)
Published in Bioinformatics (04.08.2004)
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Journal Article
A classification-based framework for predicting and analyzing gene regulatory response
Kundaje, Anshul, Middendorf, Manuel, Shah, Mihir, Wiggins, Chris H, Freund, Yoav, Leslie, Christina
Published in BMC bioinformatics (20.03.2006)
Published in BMC bioinformatics (20.03.2006)
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Journal Article
Spectrogram Analysis of Genomes
Sussillo, David, Kundaje, Anshul, Anastassiou, Dimitris
Published in EURASIP journal on advances in signal processing (01.01.2004)
Published in EURASIP journal on advances in signal processing (01.01.2004)
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