Impact of Chemical Cross-Linking on Protein Structure and Function
Rozbeský, Daniel, Rosůlek, Michal, Kukačka, Zdeněk, Chmelík, Josef, Man, Petr, Novák, Petr
Published in Analytical chemistry (Washington) (16.01.2018)
Published in Analytical chemistry (Washington) (16.01.2018)
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Molecular structure of soluble vimentin tetramers
Vermeire, Pieter-Jan, Lilina, Anastasia V., Hashim, Hani M., Dlabolová, Lada, Fiala, Jan, Beelen, Steven, Kukačka, Zdeněk, Harvey, Jeremy N., Novák, Petr, Strelkov, Sergei V.
Published in Scientific reports (31.05.2023)
Published in Scientific reports (31.05.2023)
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An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans
Matoušková, Zuzana, Orsághová, Katarína, Srb, Pavel, Pytelková, Jana, Kukačka, Zdeněk, Buša, Michal, Hajdušek, Ondřej, Šíma, Radek, Fábry, Milan, Novák, Petr, Horn, Martin, Kopáček, Petr, Mareš, Michael
Published in International journal of molecular sciences (01.02.2024)
Published in International journal of molecular sciences (01.02.2024)
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MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex
Slavata, Lukáš, Chmelík, Josef, Kavan, Daniel, Filandrová, Růžena, Fiala, Jan, Rosůlek, Michal, Mrázek, Hynek, Kukačka, Zdeněk, Vališ, Karel, Man, Petr, Miller, Michael, McIntyre, William, Fabris, Daniele, Novák, Petr
Published in Biomolecules (Basel, Switzerland) (26.09.2019)
Published in Biomolecules (Basel, Switzerland) (26.09.2019)
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Top-Down Detection of Oxidative Protein Footprinting by Collision-Induced Dissociation, Electron-Transfer Dissociation, and Electron-Capture Dissociation
Yassaghi, Ghazaleh, Kukačka, Zdeněk, Fiala, Jan, Kavan, Daniel, Halada, Petr, Volný, Michael, Novák, Petr
Published in Analytical chemistry (Washington) (19.07.2022)
Published in Analytical chemistry (Washington) (19.07.2022)
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Cover Feature: Reductant‐Induced Free Radical Fluoroalkylation of Nitrogen Heterocycles and Innate Aromatic Amino Acid Residues in Peptides and Proteins (Chem. Eur. J. 69/2019)
Rahimidashaghoul, Kheironnesae, Klimánková, Iveta, Hubálek, Martin, Korecký, Michal, Chvojka, Matúš, Pokorný, Daniel, Matoušek, Václav, Fojtík, Lukáš, Kavan, Daniel, Kukačka, Zdeněk, Novák, Petr, Beier, Petr
Published in Chemistry : a European journal (10.12.2019)
Published in Chemistry : a European journal (10.12.2019)
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Fast Fluoroalkylation of Proteins Uncovers the Structure and Dynamics of Biological Macromolecules
Fojtík, Lukáš, Fiala, Jan, Pompach, Petr, Chmelík, Josef, Matoušek, Václav, Beier, Petr, Kukačka, Zdeněk, Novák, Petr
Published in Journal of the American Chemical Society (15.12.2021)
Published in Journal of the American Chemical Society (15.12.2021)
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Utilization of Fast Photochemical Oxidation of Proteins and Both Bottom-up and Top-down Mass Spectrometry for Structural Characterization of a Transcription Factor–dsDNA Complex
Polák, Marek, Yassaghi, Ghazaleh, Kavan, Daniel, Filandr, František, Fiala, Jan, Kukačka, Zdeněk, Halada, Petr, Loginov, Dmitry S., Novák, Petr
Published in Analytical chemistry (Washington) (22.02.2022)
Published in Analytical chemistry (Washington) (22.02.2022)
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Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting
Fojtík, Lukáš, Kalaninová, Zuzana, Fiala, Jan, Halada, Petr, Chmelík, Josef, Man, Petr, Kukačka, Zdeněk, Novák, Petr
Published in Analytical chemistry (Washington) (14.05.2024)
Published in Analytical chemistry (Washington) (14.05.2024)
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LinX: A Software Tool for Uncommon Cross-Linking Chemistry
Kukačka, Zdeněk, Rosůlek, Michal, Jelínek, Jan, Slavata, Lukáš, Kavan, Daniel, Novák, Petr
Published in Journal of proteome research (02.04.2021)
Published in Journal of proteome research (02.04.2021)
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Multivalency of nucleosome recognition by LEDGF
Koutná, Eliška, Lux, Vanda, Kouba, Tomáš, Škerlová, Jana, Nováček, Jiří, Srb, Pavel, Hexnerová, Rozálie, Šváchová, Hana, Kukačka, Zdeněk, Novák, Petr, Fábry, Milan, Poepsel, Simon, Veverka, Václav
Published in Nucleic acids research (13.10.2023)
Published in Nucleic acids research (13.10.2023)
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Epitope and affinity determination of recombinant Mycobacterium tuberculosis Ag85B antigen towards anti-Ag85 antibodies using proteolytic affinity-mass spectrometry and biosensor analysis
Rinaldi, Francesca, Lupu, Loredana, Rusche, Hendrik, Kukačka, Zdeněk, Tengattini, Sara, Bernardini, Roberta, Piubelli, Luciano, Bavaro, Teodora, Maeser, Stefan, Pollegioni, Loredano, Calleri, Enrica, Przybylski, Michael, Temporini, Caterina
Published in Analytical and bioanalytical chemistry (01.01.2019)
Published in Analytical and bioanalytical chemistry (01.01.2019)
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Reductant‐Induced Free Radical Fluoroalkylation of Nitrogen Heterocycles and Innate Aromatic Amino Acid Residues in Peptides and Proteins
Rahimidashaghoul, Kheironnesae, Klimánková, Iveta, Hubálek, Martin, Korecký, Michal, Chvojka, Matúš, Pokorný, Daniel, Matoušek, Václav, Fojtík, Lukáš, Kavan, Daniel, Kukačka, Zdeněk, Novák, Petr, Beier, Petr
Published in Chemistry : a European journal (10.12.2019)
Published in Chemistry : a European journal (10.12.2019)
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SAP domain forms a flexible part of DNA aperture in Ku70/80
Hnízda, Aleš, Tesina, Petr, Nguyen, Thanh‐Binh, Kukačka, Zdeněk, Kater, Lukas, Chaplin, Amanda K., Beckmann, Roland, Ascher, David B., Novák, Petr, Blundell, Tom L.
Published in The FEBS journal (01.07.2021)
Published in The FEBS journal (01.07.2021)
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Binding of eIF3 in complex with eIF5 and eIF1 to the 40S ribosomal subunit is accompanied by dramatic structural changes
Zeman, Jakub, Itoh, Yuzuru, Kukačka, Zdeněk, Rosůlek, Michal, Kavan, Daniel, Kouba, Tomáš, Jansen, Myrte E, Mohammad, Mahabub P, Novák, Petr, Valášek, Leoš S
Published in Nucleic acids research (05.09.2019)
Published in Nucleic acids research (05.09.2019)
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Molecular Mechanism of LEDGF/p75 Dimerization
Lux, Vanda, Brouns, Tine, Čermáková, Kateřina, Srb, Pavel, Fábry, Milan, Mádlíková, Marcela, Hořejší, Magdalena, Kukačka, Zdeněk, Novák, Petr, Kugler, Michael, Brynda, Jiří, DeRijck, Jan, Christ, Frauke, Debyser, Zeger, Veverka, Václav
Published in Structure (London) (01.12.2020)
Published in Structure (London) (01.12.2020)
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Crystal structure of native β‐N‐acetylhexosaminidase isolated from Aspergillus oryzae sheds light onto its substrate specificity, high stability, and regulation by propeptide
Škerlová, Jana, Bláha, Jan, Pachl, Petr, Hofbauerová, Kateřina, Kukačka, Zdeněk, Man, Petr, Pompach, Petr, Novák, Petr, Otwinowski, Zbyszek, Brynda, Jiří, Vaněk, Ondřej, Řezáčová, Pavlína
Published in The FEBS journal (01.02.2018)
Published in The FEBS journal (01.02.2018)
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Role of the EF-hand-like Motif in the 14-3-3 Protein-mediated Activation of Yeast Neutral Trehalase Nth1
Kopecka, Miroslava, Kosek, Dalibor, Kukacka, Zdenek, Rezabkova, Lenka, Man, Petr, Novak, Petr, Obsil, Tomas, Obsilova, Veronika
Published in The Journal of biological chemistry (16.05.2014)
Published in The Journal of biological chemistry (16.05.2014)
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