Space-efficient representation of genomic k-mer count tables
Shibuya, Yoshihiro, Belazzougui, Djamal, Kucherov, Gregory
Published in Algorithms for molecular biology (21.03.2022)
Published in Algorithms for molecular biology (21.03.2022)
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Journal Article
Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing
Břinda, Karel, Callendrello, Alanna, Ma, Kevin C., MacFadden, Derek R., Charalampous, Themoula, Lee, Robyn S., Cowley, Lauren, Wadsworth, Crista B., Grad, Yonatan H., Kucherov, Gregory, O’Grady, Justin, Baym, Michael, Hanage, William P.
Published in Nature microbiology (01.03.2020)
Published in Nature microbiology (01.03.2020)
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Journal Article
Diversity of Monomers in Nonribosomal Peptides: towards the Prediction of Origin and Biological Activity
CABOCHE, Ségolène, LECLERE, Valérie, PUPIN, Maude, KUCHEROV, Gregory, JACQUES, Philippe
Published in Journal of Bacteriology (01.10.2010)
Published in Journal of Bacteriology (01.10.2010)
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Journal Article
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Diversity and structure of PIF/Harbinger-like elements in the genome of Medicago truncatula
Grzebelus, Dariusz, Lasota, Slawomir, Gambin, Tomasz, Kucherov, Gregory, Gambin, Anna
Published in BMC genomics (09.11.2007)
Published in BMC genomics (09.11.2007)
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Journal Article
On maximal repetitions of arbitrary exponent
Kolpakov, Roman, Kucherov, Gregory, Ochem, Pascal
Published in Information processing letters (01.03.2010)
Published in Information processing letters (01.03.2010)
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Journal Article
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics
Touzain, Fabrice, Schbath, Sophie, Debled-Rennesson, Isabelle, Aigle, Bertrand, Kucherov, Gregory, Leblond, Pierre
Published in BMC bioinformatics (31.01.2008)
Published in BMC bioinformatics (31.01.2008)
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Journal Article
Back-translation for discovering distant protein homologies in the presence of frameshift mutations
Girdea, Marta, Noe, Laurent, Kucherov, Gregory
Published in Algorithms for molecular biology (04.01.2010)
Published in Algorithms for molecular biology (04.01.2010)
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Journal Article
Optimal neighborhood indexing for protein similarity search
Peterlongo, Pierre, Noé, Laurent, Lavenier, Dominique, Nguyen, Van Hoa, Kucherov, Gregory, Giraud, Mathieu
Published in BMC bioinformatics (16.12.2008)
Published in BMC bioinformatics (16.12.2008)
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Journal Article
Spaced seeds improve k-mer-based metagenomic classification
Břinda, Karel, Sykulski, Maciej, Kucherov, Gregory
Published in Bioinformatics (Oxford, England) (15.11.2015)
Published in Bioinformatics (Oxford, England) (15.11.2015)
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