Fuzzy supertertiary interactions within PSD-95 enable ligand binding
Hamilton, George L, Saikia, Nabanita, Basak, Sujit, Welcome, Franceine S, Wu, Fang, Kubiak, Jakub, Zhang, Changcheng, Hao, Yan, Seidel, Claus A M, Ding, Feng, Sanabria, Hugo, Bowen, Mark E
Published in eLife (07.09.2022)
Published in eLife (07.09.2022)
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Journal Article
Structural and dynamic insights revealing how lipase binding domain MD1 of Pseudomonas aeruginosa foldase affects lipase activation
Viegas, Aldino, Dollinger, Peter, Verma, Neha, Kubiak, Jakub, Viennet, Thibault, Seidel, Claus A. M., Gohlke, Holger, Etzkorn, Manuel, Kovacic, Filip, Jaeger, Karl-Erich
Published in Scientific reports (27.02.2020)
Published in Scientific reports (27.02.2020)
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Journal Article
A raft-associated species of phosphatidylethanolamine interacts with cholesterol comparably to sphingomyelin. A Langmuir-Blodgett monolayer study
Grzybek, Michal, Kubiak, Jakub, Łach, Agnieszka, Przybyło, Magdalena, Sikorski, Aleksander F
Published in PloS one (30.03.2009)
Published in PloS one (30.03.2009)
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Journal Article
Palmitoylation of MPP1 (Membrane-palmitoylated Protein 1)/p55 Is Crucial for Lateral Membrane Organization in Erythroid Cells
Łach, Agnieszka, Grzybek, Michał, Heger, Elżbieta, Korycka, Justyna, Wolny, Marcin, Kubiak, Jakub, Kolondra, Adam, Bogusławska, Dżamila M., Augoff, Katarzyna, Majkowski, Michał, Podkalicka, Joanna, Kaczor, Jakub, Stefanko, Adam, Kuliczkowski, Kazimierz, Sikorski, Aleksander F.
Published in The Journal of biological chemistry (01.06.2012)
Published in The Journal of biological chemistry (01.06.2012)
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Journal Article
Interdomain Dynamics Underlie Function and Regulation of Postsynaptic Density Protein 95
Hamilton, George L., Saikia, Nabanita, Park, Justin, Kubiak, Jakub, Seidel, Claus A., Bowen, Mark E., Ding, Feng, Sanabria, Hugo
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Quantitative Characterization of the Conformational Dynamics of the Unbound Lipase-specific Foldase Lif by MD Simulations and Fluorescence Spectroscopy
Verma, Neha, Kubiak, Jakub, Dollinger, Peter, Kovacic, Filip, Gohlke, Holger, Seidel, Claus, Jaeger, Karl-Erich
Published in Biophysical journal (02.02.2018)
Published in Biophysical journal (02.02.2018)
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Journal Article
Integrated NMR, Fluorescence, and Molecular Dynamics Benchmark Study of Protein Mechanics and Hydrodynamics
Möckel, Christina, Kubiak, Jakub, Schillinger, Oliver, Kühnemuth, Ralf, Della Corte, Dennis, Schröder, Gunnar F, Willbold, Dieter, Strodel, Birgit, Seidel, Claus A. M, Neudecker, Philipp
Published in The journal of physical chemistry. B (21.02.2019)
Published in The journal of physical chemistry. B (21.02.2019)
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Journal Article
Resolution of Maximum Entropy Method-Derived Posterior Conformational Ensembles of a Flexible System Probed by FRET and Molecular Dynamics Simulations
Dittrich, Jonas, Popara, Milana, Kubiak, Jakub, Dimura, Mykola, Schepers, Bastian, Verma, Neha, Schmitz, Birte, Dollinger, Peter, Kovacic, Filip, Jaeger, Karl-Erich, Seidel, Claus A. M., Peulen, Thomas-Otavio, Gohlke, Holger
Published in Journal of chemical theory and computation (25.04.2023)
Published in Journal of chemical theory and computation (25.04.2023)
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Journal Article
Conformational Fluctuations as an Intrinsic Mechanism of Action: The Lipase-Specific Foldase of Pseudomonas Aeruginosa Studied by Hybrid Fluorescence Spectroscopy and MD Simulations
Kubiak, Jakub, Verma, Neha, Dollinger, Peter, Kovacic, Filip, Jaeger, Karl-Erich, Gohlke, Holger, Seidel, Claus A.M.
Published in Biophysical journal (03.02.2017)
Published in Biophysical journal (03.02.2017)
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Journal Article
Ischemic stroke as the first manifestation of peripartum cardiomyopathy: a therapeutic and diagnostic challenge
Dzierla, Julia, Kubiak, Jakub, Łączak, Michał, Bartczak-Rutkowska, Agnieszka, Straburzyńska-Migaj, Ewa, Kałużna-Oleksy, Marta
Published in Polskie archiwum medycyny wewne̦trznej (23.05.2023)
Published in Polskie archiwum medycyny wewne̦trznej (23.05.2023)
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Journal Article
Mapping the Conformational Dynamics of the Scaffold Protein PSD-95
Seidel, Claus A.M., Kubiak, Jakub, Felekyan, Suren, Rohrbeck, Daniel, McCann, James J., Bowen, Mark E.
Published in Biophysical journal (27.01.2015)
Published in Biophysical journal (27.01.2015)
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Journal Article
Conformational Fluctuations as an Intrinsic Mechanism of Action of Lipase Foldase Studied by the High-Precision FRET Toolkit and MD Simulations
Kubiak, Jakub, Kovacic, Filip, Dollinger, Peter, Bleffert, Florian, Jaeger, Karl-Erich, Gohlke, Holger, Seidel, Claus A.M.
Published in Biophysical journal (01.01.2015)
Published in Biophysical journal (01.01.2015)
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Journal Article
Withdrawal: Palmitoylation of MPP1 (membrane-palmitoylated protein 1)/p55 is crucial for lateral membrane organization in erythroid cells
Łach, Agnieszka, Grzybek, Michal, Heger, Elżbieta, Korycka, Justyna, Wolny, Marcin, Kubiak, Jakub, Kolondra, Adam, Bogusławska, Dżamila M., Augoff, Katarzyna, Majkowski, Michał, Podkalicka, Joanna, Kaczor, Jakub, Stefanko, Adam, Kuliczkowski, Kazimierz, Sikorski, Aleksander F.
Published in The Journal of biological chemistry (23.02.2018)
Published in The Journal of biological chemistry (23.02.2018)
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Journal Article
Palmitoylation of MPP1 (membrane-palmitoylated protein 1)/p55 is crucial for lateral membrane organization in erythroid cells
Łach, Agnieszka, Grzybek, Michal, Heger, Elżbieta, Korycka, Justyna, Wolny, Marcin, Kubiak, Jakub, Kolondra, Adam, Bogusławska, Dżamila M, Augoff, Katarzyna, Majkowski, Michał, Podkalicka, Joanna, Kaczor, Jakub, Stefanko, Adam, Kuliczkowski, Kazimierz, Sikorski, Aleksander F
Published in The Journal of biological chemistry (23.02.2018)
Published in The Journal of biological chemistry (23.02.2018)
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Journal Article
Lipid Lateral Organization on Giant Unilamellar Vesicles Containing Lipopolysaccharides
Kubiak, Jakub, Brewer, Jonathan, Hansen, Søren, Bagatolli, Luis A.
Published in Biophysical journal (01.02.2011)
Published in Biophysical journal (01.02.2011)
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Journal Article