Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein
Smola, Miroslav, Gutten, Ondrej, Dejmek, Milan, Kožíšek, Milan, Evangelidis, Thomas, Tehrani, Zahra Aliakbar, Novotná, Barbora, Nencka, Radim, Birkuš, Gabriel, Rulíšek, Lubomír, Boura, Evzen
Published in Angewandte Chemie International Edition (26.04.2021)
Published in Angewandte Chemie International Edition (26.04.2021)
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Apollon: a deoxyribozyme that generates a yellow product
Volek, Martin, Kurfürst, Jaroslav, Kožíšek, Milan, Srb, Pavel, Veverka, Václav, Curtis, Edward A
Published in Nucleic acids research (27.08.2024)
Published in Nucleic acids research (27.08.2024)
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Journal Article
Protein–Ligand Interactions in the STING Binding Site Probed by Rationally Designed Single-Point Mutations: Experiment and Theory
Vavřina, Zdeněk, Gutten, Ondrej, Smola, Miroslav, Zavřel, Martin, Aliakbar Tehrani, Zahra, Charvát, Vilém, Kožíšek, Milan, Boura, Evzen, Birkuš, Gabriel, Rulíšek, Lubomír
Published in Biochemistry (Easton) (02.03.2021)
Published in Biochemistry (Easton) (02.03.2021)
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Structural and Thermodynamic Analysis of the Resistance Development to Pimodivir (VX-787), the Clinical Inhibitor of Cap Binding to PB2 Subunit of Influenza A Polymerase
Gregor, Jiří, Radilová, Kateřina, Brynda, Jiří, Fanfrlík, Jindřich, Konvalinka, Jan, Kožíšek, Milan
Published in Molecules (Basel, Switzerland) (14.02.2021)
Published in Molecules (Basel, Switzerland) (14.02.2021)
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Journal Article
Unraveling the anti-influenza effect of flavonoids: Experimental validation of luteolin and its congeners as potent influenza endonuclease inhibitors
Zima, Václav, Radilová, Kateřina, Kožíšek, Milan, Albiñana, Carlos Berenguer, Karlukova, Elena, Brynda, Jiří, Fanfrlík, Jindřich, Flieger, Miroslav, Hodek, Jan, Weber, Jan, Majer, Pavel, Konvalinka, Jan, Machara, Aleš
Published in European journal of medicinal chemistry (15.12.2020)
Published in European journal of medicinal chemistry (15.12.2020)
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Journal Article
Specific Inhibitors of HIV Capsid Assembly Binding to the C‑Terminal Domain of the Capsid Protein: Evaluation of 2‑Arylquinazolines as Potential Antiviral Compounds
Machara, Aleš, Lux, Vanda, Kožíšek, Milan, Grantz Šašková, Klára, Štěpánek, Ondřej, Kotora, Martin, Parkan, Kamil, Pávová, Marcela, Glass, Bärbel, Sehr, Peter, Lewis, Joe, Müller, Barbara, Kräusslich, Hans-Georg, Konvalinka, Jan
Published in Journal of medicinal chemistry (28.01.2016)
Published in Journal of medicinal chemistry (28.01.2016)
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Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH AAA protease
Began, Jakub, Cordier, Baptiste, Březinová, Jana, Delisle, Jordan, Hexnerová, Rozálie, Srb, Pavel, Rampírová, Petra, Kožíšek, Milan, Baudet, Mathieu, Couté, Yohann, Galinier, Anne, Veverka, Václav, Doan, Thierry, Strisovsky, Kvido
Published in The EMBO journal (18.05.2020)
Published in The EMBO journal (18.05.2020)
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Journal Article
Urea and Guanidinium Induced Denaturation of a Trp-Cage Miniprotein
Heyda, Jan, Kožíšek, Milan, Bednárova, Lucie, Thompson, Gary, Konvalinka, Jan, Vondrášek, Jiří, Jungwirth, Pavel
Published in The journal of physical chemistry. B (21.07.2011)
Published in The journal of physical chemistry. B (21.07.2011)
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Journal Article
Synthesis and In Vitro Evaluation of C-7 and C-8 Luteolin Derivatives as Influenza Endonuclease Inhibitors
Reiberger, Robert, Radilová, Kateřina, Kráľ, Michal, Zima, Václav, Majer, Pavel, Brynda, Jiří, Dračínský, Martin, Konvalinka, Jan, Kožíšek, Milan, Machara, Aleš
Published in International journal of molecular sciences (20.07.2021)
Published in International journal of molecular sciences (20.07.2021)
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Journal Article
structural characterization of the interaction between the C-terminal domain of the influenza polymerase PA subunit and an optimized small peptide inhibitor
Hejdánek, Jakub, Radilová, Kateřina, Pachl, Petr, Hodek, Jan, Machara, Aleš, Weber, Jan, Řezáčová, Pavlína, Konvalinka, Jan, Kožíšek, Milan
Published in Antiviral research (01.01.2021)
Published in Antiviral research (01.01.2021)
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Journal Article
Thermodynamic and structural characterization of an optimized peptide-based inhibitor of the influenza polymerase PA-PB1 subunit interaction
Radilová, Kateřina, Zima, Václav, Kráľ, Michal, Machara, Aleš, Majer, Pavel, Hodek, Jan, Weber, Jan, Brynda, Jiří, Strmeň, Timotej, Konvalinka, Jan, Kožíšek, Milan
Published in Antiviral research (01.12.2022)
Published in Antiviral research (01.12.2022)
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Journal Article
Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog
Sivá, Monika, Svoboda, Michal, Veverka, Václav, Trempe, Jean-François, Hofmann, Kay, Kožíšek, Milan, Hexnerová, Rozálie, Sedlák, František, Belza, Jan, Brynda, Jiří, Šácha, Pavel, Hubálek, Martin, Starková, Jana, Flaisigová, Iva, Konvalinka, Jan, Šašková, Klára Grantz
Published in Scientific reports (27.07.2016)
Published in Scientific reports (27.07.2016)
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Journal Article
Kinetic, thermodynamic and structural analysis of tamiphosphor binding to neuraminidase of H1N1 (2009) pandemic influenza
Albiñana, Carlos Berenguer, Machara, Aleš, Řezáčová, Pavlína, Pachl, Petr, Konvalinka, Jan, Kožíšek, Milan
Published in European journal of medicinal chemistry (04.10.2016)
Published in European journal of medicinal chemistry (04.10.2016)
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Investigation of flexibility of neuraminidase 150-loop using tamiflu derivatives in influenza A viruses H1N1 and H5N1
Zima, Václav, Albiñana, Carlos Berenguer, Rojíková, Kateřina, Pokorná, Jana, Pachl, Petr, Řezáčová, Pavlína, Hudlicky, Jason, Navrátil, Václav, Majer, Pavel, Konvalinka, Jan, Kožíšek, Milan, Machara, Aleš
Published in Bioorganic & medicinal chemistry (01.07.2019)
Published in Bioorganic & medicinal chemistry (01.07.2019)
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Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus
Pokorná, Jana, Pachl, Petr, Karlukova, Elena, Hejdánek, Jakub, Řezáčová, Pavlína, Machara, Aleš, Hudlický, Jason, Konvalinka, Jan, Kožíšek, Milan
Published in Viruses (21.06.2018)
Published in Viruses (21.06.2018)
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Journal Article
Functional and Structural Characterization of Novel Type of Linker Connecting Capsid and Nucleocapsid Protein Domains in Murine Leukemia Virus
Doležal, Michal, Hadravová, Romana, Kožíšek, Milan, Bednárová, Lucie, Langerová, Hana, Ruml, Tomáš, Rumlová, Michaela
Published in The Journal of biological chemistry (23.09.2016)
Published in The Journal of biological chemistry (23.09.2016)
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Journal Article
GS-8374, a Prototype Phosphonate-Containing Inhibitor of HIV-1 Protease, Effectively Inhibits Protease Mutants with Amino Acid Insertions
Grantz Šašková, Klára, Kozíšek, Milan, Stray, Kirsten, de Jong, Dorien, Rezáová, Pavlína, Brynda, Jirí, van Maarseveen, Noortje M, Nijhuis, Monique, Cihlár, Tomáš, Konvalinka, Jan
Published in Journal of Virology (01.03.2014)
Published in Journal of Virology (01.03.2014)
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Fine tuning of the catalytic activity of colicin E7 nuclease domain by systematic N‐terminal mutations
Németh, Eszter, Körtvélyesi, Tamás, Thulstrup, Peter W., Christensen, Hans E. M., Kožíšek, Milan, Nagata, Kyosuke, Czene, Anikó, Gyurcsik, Béla
Published in Protein science (01.08.2014)
Published in Protein science (01.08.2014)
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