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Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
Shoguchi, Eiichi, Beedessee, Girish, Tada, Ipputa, Hisata, Kanako, Kawashima, Takeshi, Takeuchi, Takeshi, Arakaki, Nana, Fujie, Manabu, Koyanagi, Ryo, Roy, Michael C., Kawachi, Masanobu, Hidaka, Michio, Satoh, Noriyuki, Shinzato, Chuya
Published in BMC genomics (14.06.2018)
Published in BMC genomics (14.06.2018)
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Using the Acropora digitifera genome to understand coral responses to environmental change
Shinzato, Chuya, Shoguchi, Eiichi, Kawashima, Takeshi, Hamada, Mayuko, Hisata, Kanako, Tanaka, Makiko, Fujie, Manabu, Fujiwara, Mayuki, Koyanagi, Ryo, Ikuta, Tetsuro, Fujiyama, Asao, Miller, David J., Satoh, Nori
Published in Nature (London) (18.08.2011)
Published in Nature (London) (18.08.2011)
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Construction of a Risk Prediction Model of Extended Release Oxycodone Tablet-Induced Nausea and Clarification of Predictive Factors
Kumai, Masayoshi, Imai, Shungo, Kato, Shintaro, Koyanagi, Ryo, Tsuruga, Kenkichi, Yamada, Takehiro, Takekuma, Yoh, Sugawara, Mitsuru
Published in Biological & pharmaceutical bulletin (01.04.2021)
Published in Biological & pharmaceutical bulletin (01.04.2021)
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Divergent northern and southern populations and demographic history of the pearl oyster in the western Pacific revealed with genomic SNPs
Takeuchi, Takeshi, Masaoka, Tetsuji, Aoki, Hideo, Koyanagi, Ryo, Fujie, Manabu, Satoh, Noriyuki
Published in Evolutionary applications (01.04.2020)
Published in Evolutionary applications (01.04.2020)
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Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure
Shoguchi, Eiichi, Shinzato, Chuya, Kawashima, Takeshi, Gyoja, Fuki, Mungpakdee, Sutada, Koyanagi, Ryo, Takeuchi, Takeshi, Hisata, Kanako, Tanaka, Makiko, Fujiwara, Mayuki, Hamada, Mayuko, Seidi, Azadeh, Fujie, Manabu, Usami, Takeshi, Goto, Hiroki, Yamasaki, Shinichi, Arakaki, Nana, Suzuki, Yutaka, Sugano, Sumio, Toyoda, Atsushi, Kuroki, Yoko, Fujiyama, Asao, Medina, Mónica, Coffroth, Mary Alice, Bhattacharya, Debashish, Satoh, Nori
Published in Current biology (05.08.2013)
Published in Current biology (05.08.2013)
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Genetic isolation of an amphidromous goby species, Luciogobius ryukyuensis, highlights limited gene flow in small island populations
Maeda, Ken, Kobayashi, Hirozumi, Uchida, Taiga, Shinzato, Chuya, Koyanagi, Ryo, Nagano, Atsushi J., Satoh, Noriyuki, Laudet, Vincent
Published in Scientific reports (07.07.2025)
Published in Scientific reports (07.07.2025)
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Dual Gene Repertoires for Larval and Adult Shells Reveal Molecules Essential for Molluscan Shell Formation
Zhao, Ran, Takeuchi, Takeshi, Luo, Yi-Jyun, Ishikawa, Akito, Kobayashi, Tatsushi, Koyanagi, Ryo, Villar-Briones, Alejandro, Yamada, Lixy, Sawada, Hitoshi, Iwanaga, Shunsuke, Nagai, Kiyohito, Satoh, Noriyuki, Endo, Kazuyoshi
Published in Molecular biology and evolution (01.11.2018)
Published in Molecular biology and evolution (01.11.2018)
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The habu genome reveals accelerated evolution of venom protein genes
Shibata, Hiroki, Chijiwa, Takahito, Oda-Ueda, Naoko, Nakamura, Hitomi, Yamaguchi, Kazuaki, Hattori, Shousaku, Matsubara, Kazumi, Matsuda, Yoichi, Yamashita, Akifumi, Isomoto, Akiko, Mori, Kazuki, Tashiro, Kosuke, Kuhara, Satoru, Yamasaki, Shinichi, Fujie, Manabu, Goto, Hiroki, Koyanagi, Ryo, Takeuchi, Takeshi, Fukumaki, Yasuyuki, Ohno, Motonori, Shoguchi, Eiichi, Hisata, Kanako, Satoh, Noriyuki, Ogawa, Tomohisa
Published in Scientific Reports (26.07.2018)
Published in Scientific Reports (26.07.2018)
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Medusozoan genomes inform the evolution of the jellyfish body plan
Khalturin, Konstantin, Shinzato, Chuya, Khalturina, Maria, Hamada, Mayuko, Fujie, Manabu, Koyanagi, Ryo, Kanda, Miyuki, Goto, Hiroki, Anton-Erxleben, Friederike, Toyokawa, Masaya, Toshino, Sho, Satoh, Noriyuki
Published in Nature ecology & evolution (01.05.2019)
Published in Nature ecology & evolution (01.05.2019)
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Phylogenetic comparisons reveal mosaic histories of larval and adult shell matrix protein deployment in pteriomorph bivalves
Zhao, Ran, Takeuchi, Takeshi, Koyanagi, Ryo, Villar-Briones, Alejandro, Yamada, Lixy, Sawada, Hitoshi, Ishikawa, Akito, Iwanaga, Shunsuke, Nagai, Kiyohito, Che, Yuqi, Satoh, Noriyuki, Endo, Kazuyoshi
Published in Scientific reports (17.12.2020)
Published in Scientific reports (17.12.2020)
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Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads
Luo, Yi-Jyun, Kanda, Miyuki, Koyanagi, Ryo, Hisata, Kanako, Akiyama, Tadashi, Sakamoto, Hirotaka, Sakamoto, Tatsuya, Satoh, Noriyuki
Published in Nature ecology & evolution (01.01.2018)
Published in Nature ecology & evolution (01.01.2018)
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The ‘Shellome’ of the Crocus Clam Tridacna crocea Emphasizes Essential Components of Mollusk Shell Biomineralization
Takeuchi, Takeshi, Fujie, Manabu, Koyanagi, Ryo, Plasseraud, Laurent, Ziegler-Devin, Isabelle, Brosse, Nicolas, Broussard, Cédric, Satoh, Noriyuki, Marin, Frédéric
Published in Frontiers in genetics (08.06.2021)
Published in Frontiers in genetics (08.06.2021)
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Validation and standardization of DNA extraction and library construction methods for metagenomics-based human fecal microbiome measurements
Tourlousse, Dieter M., Narita, Koji, Miura, Takamasa, Sakamoto, Mitsuo, Ohashi, Akiko, Shiina, Keita, Matsuda, Masami, Miura, Daisuke, Shimamura, Mamiko, Ohyama, Yoshifumi, Yamazoe, Atsushi, Uchino, Yoshihito, Kameyama, Keishi, Arioka, Shingo, Kataoka, Jiro, Hisada, Takayoshi, Fujii, Kazuyuki, Takahashi, Shunsuke, Kuroiwa, Miho, Rokushima, Masatomo, Nishiyama, Mitsue, Tanaka, Yoshiki, Fuchikami, Takuya, Aoki, Hitomi, Kira, Satoshi, Koyanagi, Ryo, Naito, Takeshi, Nishiwaki, Morie, Kumagai, Hirotaka, Konda, Mikiko, Kasahara, Ken, Ohkuma, Moriya, Kawasaki, Hiroko, Sekiguchi, Yuji, Terauchi, Jun
Published in Microbiome (29.04.2021)
Published in Microbiome (29.04.2021)
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A new species of Xenoturbella from the western Pacific Ocean and the evolution of Xenoturbella
Nakano, Hiroaki, Miyazawa, Hideyuki, Maeno, Akiteru, Shiroishi, Toshihiko, Kakui, Keiichi, Koyanagi, Ryo, Kanda, Miyuki, Satoh, Noriyuki, Omori, Akihito, Kohtsuka, Hisanori
Published in BMC evolutionary biology (18.12.2017)
Published in BMC evolutionary biology (18.12.2017)
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Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge
Gusev, Oleg, Suetsugu, Yoshitaka, Cornette, Richard, Kawashima, Takeshi, Logacheva, Maria D., Kondrashov, Alexey S., Penin, Aleksey A., Hatanaka, Rie, Kikuta, Shingo, Shimura, Sachiko, Kanamori, Hiroyuki, Katayose, Yuichi, Matsumoto, Takashi, Shagimardanova, Elena, Alexeev, Dmitry, Govorun, Vadim, Wisecaver, Jennifer, Mikheyev, Alexander, Koyanagi, Ryo, Fujie, Manabu, Nishiyama, Tomoaki, Shigenobu, Shuji, Shibata, Tomoko F., Golygina, Veronika, Hasebe, Mitsuyasu, Okuda, Takashi, Satoh, Nori, Kikawada, Takahiro
Published in Nature communications (12.09.2014)
Published in Nature communications (12.09.2014)
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Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle
Takeuchi, Takeshi, Koyanagi, Ryo, Gyoja, Fuki, Kanda, Miyuki, Hisata, Kanako, Fujie, Manabu, Goto, Hiroki, Yamasaki, Shinichi, Nagai, Kiyohito, Morino, Yoshiaki, Miyamoto, Hiroshi, Endo, Kazuyoshi, Endo, Hirotoshi, Nagasawa, Hiromichi, Kinoshita, Shigeharu, Asakawa, Shuichi, Watabe, Shugo, Satoh, Noriyuki, Kawashima, Takeshi
Published in Zoological letters (18.02.2016)
Published in Zoological letters (18.02.2016)
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Multilocus phylogenetic analysis of the first molecular data from the rare and monotypic Amarsipidae places the family within the Pelagia and highlights limitations of existing data sets in resolving pelagian interrelationships
Campbell, Matthew A., Sado, Tetsuya, Shinzato, Chuya, Koyanagi, Ryo, Okamoto, Makoto, Miya, Masaki
Published in Molecular Phylogenetics and Evolution (01.07.2018)
Published in Molecular Phylogenetics and Evolution (01.07.2018)
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A Possible Trifunctional β-Carotene Synthase Gene Identified in the Draft Genome of Aurantiochytrium sp. Strain KH105
Iwasaka, Hiroaki, Koyanagi, Ryo, Satoh, Ryota, Nagano, Akiko, Watanabe, Kenshi, Hisata, Kanako, Satoh, Noriyuki, Aki, Tsunehiro
Published in Genes (09.04.2018)
Published in Genes (09.04.2018)
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Massive Gene Transfer and Extensive RNA Editing of a Symbiotic Dinoflagellate Plastid Genome
Mungpakdee, Sutada, Shinzato, Chuya, Takeuchi, Takeshi, Kawashima, Takeshi, Koyanagi, Ryo, Hisata, Kanako, Tanaka, Makiko, Goto, Hiroki, Fujie, Manabu, Lin, Senjie, Satoh, Nori, Shoguchi, Eiichi
Published in Genome biology and evolution (01.06.2014)
Published in Genome biology and evolution (01.06.2014)
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