HLA ligandome analysis identifies the underlying specificities of spontaneous antileukemia immune responses in chronic lymphocytic leukemia (CLL)
Kowalewski, Daniel J., Schuster, Heiko, Backert, Linus, Berlin, Claudia, Kahn, Stefan, Kanz, Lothar, Salih, Helmut R., Rammensee, Hans-Georg, Stevanovic, Stefan, Stickel, Juliane Sarah
Published in Proceedings of the National Academy of Sciences - PNAS (13.01.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (13.01.2015)
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Mapping the HLA Ligandome of Colorectal Cancer Reveals an Imprint of Malignant Cell Transformation
Löffler, Markus W, Kowalewski, Daniel J, Backert, Linus, Bernhardt, Jörg, Adam, Patrick, Schuster, Heiko, Dengler, Florian, Backes, Daniel, Kopp, Hans-Georg, Beckert, Stefan, Wagner, Silvia, Königsrainer, Ingmar, Kohlbacher, Oliver, Kanz, Lothar, Königsrainer, Alfred, Rammensee, Hans-Georg, Stevanović, Stefan, Haen, Sebastian P
Published in Cancer research (Chicago, Ill.) (15.08.2018)
Published in Cancer research (Chicago, Ill.) (15.08.2018)
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Integrative -omics and HLA-ligandomics analysis to identify novel drug targets for ccRCC immunotherapy
Reustle, Anna, Di Marco, Moreno, Meyerhoff, Carolin, Nelde, Annika, Walz, Juliane S, Winter, Stefan, Kandabarau, Siahei, Büttner, Florian, Haag, Mathias, Backert, Linus, Kowalewski, Daniel J, Rausch, Steffen, Hennenlotter, Jörg, Stühler, Viktoria, Scharpf, Marcus, Fend, Falko, Stenzl, Arnulf, Rammensee, Hans-Georg, Bedke, Jens, Stevanović, Stefan, Schwab, Matthias, Schaeffeler, Elke
Published in Genome medicine (30.03.2020)
Published in Genome medicine (30.03.2020)
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An open-source computational and data resource to analyze digital maps of immunopeptidomes
Caron, Etienne, Espona, Lucia, Kowalewski, Daniel J, Schuster, Heiko, Ternette, Nicola, Alpízar, Adán, Schittenhelm, Ralf B, Ramarathinam, Sri H, Lindestam Arlehamn, Cecilia S, Chiek Koh, Ching, Gillet, Ludovic C, Rabsteyn, Armin, Navarro, Pedro, Kim, Sangtae, Lam, Henry, Sturm, Theo, Marcilla, Miguel, Sette, Alessandro, Campbell, David S, Deutsch, Eric W, Moritz, Robert L, Purcell, Anthony W, Rammensee, Hans-Georg, Stevanovic, Stefan, Aebersold, Ruedi
Published in eLife (08.07.2015)
Published in eLife (08.07.2015)
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A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer
Löffler, Markus W, Nussbaum, Bianca, Jäger, Günter, Jurmeister, Philipp S, Budczies, Jan, Pereira, Philippe L, Clasen, Stephan, Kowalewski, Daniel J, Mühlenbruch, Lena, Königsrainer, Ingmar, Beckert, Stefan, Ladurner, Ruth, Wagner, Silvia, Bullinger, Florian, Gross, Thorben H, Schroeder, Christopher, Sipos, Bence, Königsrainer, Alfred, Stevanović, Stefan, Denkert, Carsten, Rammensee, Hans-Georg, Gouttefangeas, Cécile, Haen, Sebastian P
Published in Frontiers in immunology (19.11.2019)
Published in Frontiers in immunology (19.11.2019)
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HLA ligandome analysis of primary chronic lymphocytic leukemia (CLL) cells under lenalidomide treatment confirms the suitability of lenalidomide for combination with T-cell-based immunotherapy
Nelde, Annika, Kowalewski, Daniel J., Backert, Linus, Schuster, Heiko, Werner, Jan-Ole, Klein, Reinhild, Kohlbacher, Oliver, Kanz, Lothar, Salih, Helmut R., Rammensee, Hans-Georg, Stevanović, Stefan, Walz, Juliane S.
Published in Oncoimmunology (03.04.2018)
Published in Oncoimmunology (03.04.2018)
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A new synthetic toll-like receptor 1/2 ligand is an efficient adjuvant for peptide vaccination in a human volunteer
Rammensee, Hans-Georg, Wiesmüller, Karl-Heinz, Chandran, P. Anoop, Zelba, Henning, Rusch, Elisa, Gouttefangeas, Cécile, Kowalewski, Daniel J., Di Marco, Moreno, Haen, Sebastian P., Walz, Juliane S., Gloria, Yamel Cardona, Bödder, Johanna, Schertel, Jill-Marie, Tunger, Antje, Müller, Luise, Kießler, Maximilian, Wehner, Rebekka, Schmitz, Marc, Jakobi, Meike, Schneiderhan-Marra, Nicole, Klein, Reinhild, Laske, Karoline, Artzner, Kerstin, Backert, Linus, Schuster, Heiko, Schwenck, Johannes, Weber, Alexander N. R., Pichler, Bernd J., Kneilling, Manfred, la Fougère, Christian, Forchhammer, Stephan, Metzler, Gisela, Bauer, Jürgen, Weide, Benjamin, Schippert, Wilfried, Stevanović, Stefan, Löffler, Markus W.
Published in Journal for immunotherapy of cancer (15.11.2019)
Published in Journal for immunotherapy of cancer (15.11.2019)
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Characterization of the Canine MHC Class I DLA-8850101 Peptide Binding Motif as a Prerequisite for Canine T Cell Immunotherapy
Barth, Sharon M, Schreitmüller, Christian M, Proehl, Franziska, Oehl, Kathrin, Lumpp, Leonie M, Kowalewski, Daniel J, Di Marco, Moreno, Sturm, Theo, Backert, Linus, Schuster, Heiko, Stevanović, Stefan, Rammensee, Hans-Georg, Planz, Oliver
Published in PloS one (28.11.2016)
Published in PloS one (28.11.2016)
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SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition
Nelde, Annika, Bilich, Tatjana, Heitmann, Jonas S, Maringer, Yacine, Salih, Helmut R, Roerden, Malte, Lübke, Maren, Bauer, Jens, Rieth, Jonas, Wacker, Marcel, Peter, Andreas, Hörber, Sebastian, Traenkle, Bjoern, Kaiser, Philipp D, Rothbauer, Ulrich, Becker, Matthias, Junker, Daniel, Krause, Gérard, Strengert, Monika, Schneiderhan-Marra, Nicole, Templin, Markus F, Joos, Thomas O, Kowalewski, Daniel J, Stos-Zweifel, Vlatka, Fehr, Michael, Rabsteyn, Armin, Mirakaj, Valbona, Karbach, Julia, Jäger, Elke, Graf, Michael, Gruber, Lena-Christin, Rachfalski, David, Preuß, Beate, Hagelstein, Ilona, Märklin, Melanie, Bakchoul, Tamam, Gouttefangeas, Cécile, Kohlbacher, Oliver, Klein, Reinhild, Stevanović, Stefan, Rammensee, Hans-Georg, Walz, Juliane S
Published in Nature immunology (01.01.2021)
Published in Nature immunology (01.01.2021)
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Pitfalls in HLA Ligandomics—How to Catch a Li(e)gand
Fritsche, Jens, Kowalewski, Daniel J., Backert, Linus, Gwinner, Frederik, Dorner, Sonja, Priemer, Martin, Tsou, Chih-Chiang, Hoffgaard, Franziska, Römer, Michael, Schuster, Heiko, Schoor, Oliver, Weinschenk, Toni
Published in Molecular & cellular proteomics (01.01.2021)
Published in Molecular & cellular proteomics (01.01.2021)
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Identification of non-mutated neoantigens presented by TAP-deficient tumors
Marijt, Koen A, Blijleven, Laura, Verdegaal, Els M E, Kester, Michel G, Kowalewski, Daniel J, Rammensee, Hans-Georg, Stevanović, Stefan, Heemskerk, Mirjam H M, van der Burg, Sjoerd H, van Hall, Thorbald
Published in The Journal of experimental medicine (03.09.2018)
Published in The Journal of experimental medicine (03.09.2018)
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MHC‑I Ligand Discovery Using Targeted Database Searches of Mass Spectrometry Data: Implications for T‑Cell Immunotherapies
Murphy, J. Patrick, Konda, Prathyusha, Kowalewski, Daniel J, Schuster, Heiko, Clements, Derek, Kim, Youra, Cohen, Alejandro M, Sharif, Tanveer, Nielsen, Morten, Stevanovic, Stefan, Lee, Patrick W, Gujar, Shashi
Published in Journal of proteome research (07.04.2017)
Published in Journal of proteome research (07.04.2017)
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The HLA ligandome landscape of chronic myeloid leukemia delineates novel T-cell epitopes for immunotherapy
Bilich, Tatjana, Nelde, Annika, Bichmann, Leon, Roerden, Malte, Salih, Helmut R., Kowalewski, Daniel J., Schuster, Heiko, Tsou, Chih-Chiang, Marcu, Ana, Neidert, Marian C., Lübke, Maren, Rieth, Jonas, Schemionek, Mirle, Brümmendorf, Tim H., Vucinic, Vladan, Niederwieser, Dietger, Bauer, Jens, Märklin, Melanie, Peper, Janet K., Klein, Reinhild, Kohlbacher, Oliver, Kanz, Lothar, Rammensee, Hans-Georg, Stevanović, Stefan, Walz, Juliane S.
Published in Blood (07.02.2019)
Published in Blood (07.02.2019)
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Multi-omics discovery of exome-derived neoantigens in hepatocellular carcinoma
Löffler, Markus W, Mohr, Christopher, Bichmann, Leon, Freudenmann, Lena Katharina, Walzer, Mathias, Schroeder, Christopher M, Trautwein, Nico, Hilke, Franz J, Zinser, Raphael S, Mühlenbruch, Lena, Kowalewski, Daniel J, Schuster, Heiko, Sturm, Marc, Matthes, Jakob, Riess, Olaf, Czemmel, Stefan, Nahnsen, Sven, Königsrainer, Ingmar, Thiel, Karolin, Nadalin, Silvio, Beckert, Stefan, Bösmüller, Hans, Fend, Falko, Velic, Ana, Maček, Boris, Haen, Sebastian P, Buonaguro, Luigi, Kohlbacher, Oliver, Stevanović, Stefan, Königsrainer, Alfred, Rammensee, Hans-Georg
Published in Genome medicine (30.04.2019)
Published in Genome medicine (30.04.2019)
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Quantitative immunopeptidomics reveals a tumor stroma-specific target for T cell therapy
Kim, Gloria B, Fritsche, Jens, Bunk, Sebastian, Mahr, Andrea, Unverdorben, Felix, Tosh, Kevin, Kong, Hong, Maldini, Colby R, Lau, Chui, Srivatsa, Sriram, Jiang, Shuguang, Glover, Joshua, Dopkin, Derek, Zhang, Carolyn X, Schuster, Heiko, Kowalewski, Daniel J, Goldfinger, Valentina, Ott, Martina, Fuhrmann, David, Baues, Maike, Boesmueller, Hans, Schraeder, Christoph, Schimmack, Gisela, Song, Colette, Hoffgaard, Franziska, Roemer, Michael, Tsou, Chih-Chiang, Hofmann, Martin, Treiber, Thomas, Hutt, Meike, Alten, Leonie, Jaworski, Maike, Alpert, Amir, Missel, Sarah, Reinhardt, Carsten, Singh, Harpreet, Schoor, Oliver, Walter, Steffen, Wagner, Claudia, Maurer, Dominik, Weinschenk, Toni, Riley, James L
Published in Science translational medicine (31.08.2022)
Published in Science translational medicine (31.08.2022)
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Personalized peptide vaccine induced immune response associated with long-term survival of a metastatic cholangiocarcinoma patient
Löffler, Markus W, Anoop Chandran, P, Laske, Karoline, Schroeder, Christopher, Bonzheim, Irina, Walzer, Mathias, Hilke, Franz J, Trautwein, Nico, Kowalewski, Daniel J, Schuster, Heiko, Günder, Marc, Carcamo Yañez, Viviana A, Mohr, Christopher, Sturm, Marc, Nguyen, Huu-Phuc, Riess, Olaf, Bauer, Peter, Nahnsen, Sven, Nadalin, Silvio, Zieker, Derek, Glatzle, Jörg, Thiel, Karolin, Schneiderhan-Marra, Nicole, Clasen, Stephan, Bösmüller, Hans, Fend, Falko, Kohlbacher, Oliver, Gouttefangeas, Cécile, Stevanović, Stefan, Königsrainer, Alfred, Rammensee, Hans-Georg
Published in Journal of hepatology (01.10.2016)
Published in Journal of hepatology (01.10.2016)
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Identification of HCMV-derived T cell epitopes in seropositive individuals through viral deletion models
Lübke, Maren, Spalt, Stefanie, Kowalewski, Daniel J, Zimmermann, Cosima, Bauersfeld, Liane, Nelde, Annika, Bichmann, Leon, Marcu, Ana, Peper, Janet Kerstin, Kohlbacher, Oliver, Walz, Juliane S, Le-Trilling, Vu Thuy Khanh, Hengel, Hartmut, Rammensee, Hans-Georg, Stevanović, Stefan, Halenius, Anne
Published in The Journal of experimental medicine (02.03.2020)
Published in The Journal of experimental medicine (02.03.2020)
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Multiplexed Relative Quantitation with Isobaric Tagging Mass Spectrometry Reveals Class I Major Histocompatibility Complex Ligand Dynamics in Response to Doxorubicin
Murphy, J. Patrick, Yu, Qijia, Konda, Prathyusha, Paulo, Joao A, Jedrychowski, Mark P, Kowalewski, Daniel J, Schuster, Heiko, Kim, Youra, Clements, Derek, Jain, Aditya, Stevanovic, Stefan, Gygi, Steven P, Mancias, Joseph D, Gujar, Shashi
Published in Analytical chemistry (Washington) (16.04.2019)
Published in Analytical chemistry (Washington) (16.04.2019)
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Therapy-Induced MHC I Ligands Shape Neo-Antitumor CD8 T Cell Responses during Oncolytic Virus-Based Cancer Immunotherapy
Murphy, J. Patrick, Kim, Youra, Clements, Derek R, Konda, Prathyusha, Schuster, Heiko, Kowalewski, Daniel J, Paulo, Joao A, Cohen, Alejandro M, Stevanovic, Stefan, Gygi, Steven P, Gujar, Shashi
Published in Journal of proteome research (07.06.2019)
Published in Journal of proteome research (07.06.2019)
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