Modeling of protein–peptide interactions using the CABS-dock web server for binding site search and flexible docking
Blaszczyk, Maciej, Kurcinski, Mateusz, Kouza, Maksim, Wieteska, Lukasz, Debinski, Aleksander, Kolinski, Andrzej, Kmiecik, Sebastian
Published in Methods (San Diego, Calif.) (15.01.2016)
Published in Methods (San Diego, Calif.) (15.01.2016)
Get full text
Journal Article
Integrative modeling of diverse protein-peptide systems using CABS-dock
Pulawski, Wojciech, Kolinski, Andrzej, Kolinski, Michal
Published in PLoS computational biology (01.07.2023)
Published in PLoS computational biology (01.07.2023)
Get full text
Journal Article
Role of Resultant Dipole Moment in Mechanical Dissociation of Biological Complexes
Kouza, Maksim, Banerji, Anirban, Kolinski, Andrzej, Buhimschi, Irina, Kloczkowski, Andrzej
Published in Molecules (Basel, Switzerland) (10.08.2018)
Published in Molecules (Basel, Switzerland) (10.08.2018)
Get full text
Journal Article
Modeling of Protein Structural Flexibility and Large-Scale Dynamics: Coarse-Grained Simulations and Elastic Network Models
Kmiecik, Sebastian, Kouza, Maksim, Badaczewska-Dawid, Aleksandra E, Kloczkowski, Andrzej, Kolinski, Andrzej
Published in International journal of molecular sciences (06.11.2018)
Published in International journal of molecular sciences (06.11.2018)
Get full text
Journal Article
Kinetics and mechanical stability of the fibril state control fibril formation time of polypeptide chains: A computational study
Kouza, Maksim, Co, Nguyen Truong, Li, Mai Suan, Kmiecik, Sebastian, Kolinski, Andrzej, Kloczkowski, Andrzej, Buhimschi, Irina Alexandra
Published in The Journal of chemical physics (07.06.2018)
Published in The Journal of chemical physics (07.06.2018)
Get more information
Journal Article
Characterization of protein-folding pathways by reduced-space modeling
Kmiecik, Sebastian, Kolinski, Andrzej
Published in Proceedings of the National Academy of Sciences - PNAS (24.07.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (24.07.2007)
Get full text
Journal Article
SURPASS Low-Resolution Coarse-Grained Protein Modeling
Dawid, Aleksandra E, Gront, Dominik, Kolinski, Andrzej
Published in Journal of chemical theory and computation (14.11.2017)
Published in Journal of chemical theory and computation (14.11.2017)
Get full text
Journal Article
Modeling of Disordered Protein Structures Using Monte Carlo Simulations and Knowledge-Based Statistical Force Fields
Ciemny, Maciej Pawel, Badaczewska-Dawid, Aleksandra Elzbieta, Pikuzinska, Monika, Kolinski, Andrzej, Kmiecik, Sebastian
Published in International journal of molecular sciences (31.01.2019)
Published in International journal of molecular sciences (31.01.2019)
Get full text
Journal Article
CABS-flex 2.0: a web server for fast simulations of flexibility of protein structures
Kuriata, Aleksander, Gierut, Aleksandra Maria, Oleniecki, Tymoteusz, Ciemny, Maciej Paweł, Kolinski, Andrzej, Kurcinski, Mateusz, Kmiecik, Sebastian
Published in Nucleic acids research (02.07.2018)
Published in Nucleic acids research (02.07.2018)
Get full text
Journal Article
Coarse-Grained Simulations of Membrane Insertion and Folding of Small Helical Proteins Using the CABS Model
Pulawski, Wojciech, Jamroz, Michal, Kolinski, Michal, Kolinski, Andrzej, Kmiecik, Sebastian
Published in Journal of chemical information and modeling (28.11.2016)
Published in Journal of chemical information and modeling (28.11.2016)
Get full text
Journal Article