circGPA: circRNA functional annotation based on probability-generating functions
RyÅ¡avý, Petr, Kléma, JiÅí, Merkerová, Michaela Dostálová
Published in BMC bioinformatics (27.09.2022)
Published in BMC bioinformatics (27.09.2022)
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Gene expression profiles and protein-protein interaction networks in THP-1 cells exposed to metal-based nanomaterials
Michal, Šíma, Helena, Líbalová, Táňa, Závodná, Kristýna, Vrbová, Jiří, Kléma, Pavel, Rössner
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Published in Environmental toxicology and pharmacology (01.06.2024)
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Improved recovery and annotation of genes in metagenomes through the prediction of fungal introns
Le, Anh Vu, Větrovský, Tomáš, Barucic, Denis, Saraiva, Joao Pedro, Dobbler, Priscila Thiago, Kohout, Petr, Pospíšek, Martin, da Rocha, Ulisses Nunes, Kléma, Jiří, Baldrian, Petr
Published in Molecular ecology resources (01.11.2023)
Published in Molecular ecology resources (01.11.2023)
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Molecular patterns of isolated tubulitis differ from tubulitis with interstitial inflammation in early indication biopsies of kidney allografts
Hruba, Petra, Madill-Thomsen, Katelynn, Mackova, Martina, Klema, Jiri, Maluskova, Jana, Voska, Ludek, Parikova, Alena, Slatinska, Janka, Halloran, Philip F., Viklicky, Ondrej
Published in Scientific reports (17.12.2020)
Published in Scientific reports (17.12.2020)
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Replication of SNP associations with keratoconus in a Czech cohort
Liskova, Petra, Dudakova, Lubica, Krepelova, Anna, Klema, Jiri, Hysi, Pirro G
Published in PloS one (16.02.2017)
Published in PloS one (16.02.2017)
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Author Correction: Molecular patterns of isolated tubulitis differ from tubulitis with interstitial inflammation in early indication biopsies of kidney allografts
Hruba, Petra, Madill-Thomsen, Katelynn, Mackova, Martina, Klema, Jiri, Maluskova, Jana, Voska, Ludek, Parikova, Alena, Slatinska, Janka, Halloran, Philip F., Viklicky, Ondrej
Published in Scientific reports (14.04.2021)
Published in Scientific reports (14.04.2021)
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Comparative evaluation of set-level techniques in predictive classification of gene expression samples
Holec, Matěj, Kléma, Jiří, Zelezný, Filip, Tolar, Jakub
Published in BMC bioinformatics (25.06.2012)
Published in BMC bioinformatics (25.06.2012)
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2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) Disrupts Control of Cell Proliferation and Apoptosis in a Human Model of Adult Liver Progenitors
Svobodová, Jana, Procházková, Jiřina, Kabátková, Markéta, Krkoška, Martin, Šmerdová, Lenka, Líbalová, Helena, Topinka, Jan, Kléma, Jiří, Kozubík, Alois, Machala, Miroslav, Vondráček, Jan
Published in Toxicological sciences (01.12.2019)
Published in Toxicological sciences (01.12.2019)
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A prolonged exposure of human lung carcinoma epithelial cells to benzo[a]pyrene induces p21-dependent epithelial-to-mesenchymal transition (EMT)-like phenotype
Hýžďalová, Martina, Procházková, Jiřina, Strapáčová, Simona, Svržková, Lucie, Vacek, Ondřej, Fedr, Radek, Andrysík, Zdeněk, Hrubá, Eva, Líbalová, Helena, Kléma, Jiří, Topinka, Jan, Mašek, Josef, Souček, Karel, Vondráček, Jan, Machala, Miroslav
Published in Chemosphere (Oxford) (01.01.2021)
Published in Chemosphere (Oxford) (01.01.2021)
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The Differential Effect of Carbon Dots on Gene Expression and DNA Methylation of Human Embryonic Lung Fibroblasts as a Function of Surface Charge and Dose
Sima, Michal, Vrbova, Kristyna, Zavodna, Tana, Honkova, Katerina, Chvojkova, Irena, Ambroz, Antonin, Klema, Jiri, Rossnerova, Andrea, Polakova, Katerina, Malina, Tomas, Belza, Jan, Topinka, Jan, Rossner, Jr, Pavel
Published in International journal of molecular sciences (04.07.2020)
Published in International journal of molecular sciences (04.07.2020)
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DNA Methylation Profiles in a Group of Workers Occupationally Exposed to Nanoparticles
Rossnerova, Andrea, Honkova, Katerina, Pelclova, Daniela, Zdimal, Vladimir, Hubacek, Jaroslav A, Chvojkova, Irena, Vrbova, Kristyna, Rossner, Jr, Pavel, Topinka, Jan, Vlckova, Stepanka, Fenclova, Zdenka, Lischkova, Lucie, Klusackova, Pavlina, Schwarz, Jaroslav, Ondracek, Jakub, Ondrackova, Lucie, Kostejn, Martin, Klema, Jiri, Dvorackova, Stepanka
Published in International journal of molecular sciences (31.03.2020)
Published in International journal of molecular sciences (31.03.2020)
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Adaptive changes in global gene expression profile of lung carcinoma A549 cells acutely exposed to distinct types of AhR ligands
Procházková, Jiřina, Strapáčová, Simona, Svržková, Lucie, Andrysík, Zdeněk, Hýžďalová, Martina, Hrubá, Eva, Pěnčíková, Kateřina, Líbalová, Helena, Topinka, Jan, Kléma, Jiří, Espinosa, Joaquín M., Vondráček, Jan, Machala, Miroslav
Published in Toxicology letters (01.08.2018)
Published in Toxicology letters (01.08.2018)
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Transcription profiles in BEAS-2B cells exposed to organic extracts from particulate emissions produced by a port-fuel injection vehicle, fueled with conventional fossil gasoline and gasoline-ethanol blend
Líbalová, Helena, Závodná, Táňa, Vrbová, Kristýna, Sikorová, Jitka, Vojtíšek-Lom, Michal, Beránek, Vít, Pechout, Martin, Kléma, Jiří, Ciganek, Miroslav, Machala, Miroslav, Neča, Jiří, Rössner, Pavel, Topinka, Jan
Published in Mutation research. Genetic toxicology and environmental mutagenesis (01.12.2021)
Published in Mutation research. Genetic toxicology and environmental mutagenesis (01.12.2021)
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Semantic clustering analysis of E3-ubiquitin ligases in gastrointestinal tract defines genes ontology clusters with tissue expression patterns
Iatsiuk, Veronika, Malinka, Frantisek, Pickova, Marketa, Tureckova, Jolana, Klema, Jiri, Spoutil, Frantisek, Novosadova, Vendula, Prochazka, Jan, Sedlacek, Radislav
Published in BMC gastroenterology (12.04.2022)
Published in BMC gastroenterology (12.04.2022)
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Ordinary Gasoline Emissions Induce a Toxic Response in Bronchial Cells Grown at Air-Liquid Interface
Cervena, Tereza, Vojtisek-Lom, Michal, Vrbova, Kristyna, Ambroz, Antonin, Novakova, Zuzana, Elzeinova, Fatima, Sima, Michal, Beranek, Vit, Pechout, Martin, Macoun, David, Klema, Jiri, Rossnerova, Andrea, Ciganek, Miroslav, Topinka, Jan, Rossner, Jr, Pavel
Published in International journal of molecular sciences (23.12.2020)
Published in International journal of molecular sciences (23.12.2020)
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