High-level classification of the Fungi and a tool for evolutionary ecological analyses
Tedersoo, Leho, Sánchez-Ramírez, Santiago, Kõljalg, Urmas, Bahram, Mohammad, Döring, Markus, Schigel, Dmitry, May, Tom, Ryberg, Martin, Abarenkov, Kessy
Published in Fungal diversity (01.05.2018)
Published in Fungal diversity (01.05.2018)
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Journal Article
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
Nilsson, Rolf Henrik, Larsson, Karl-Henrik, Taylor, Andy F S, Bengtsson-Palme, Johan, Jeppesen, Thomas S, Schigel, Dmitry, Kennedy, Peter, Picard, Kathryn, Glöckner, Frank Oliver, Tedersoo, Leho, Saar, Irja, Kõljalg, Urmas, Abarenkov, Kessy
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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Journal Article
FungalRoot: global online database of plant mycorrhizal associations
Soudzilovskaia, Nadejda A., Vaessen, Stijn, Barcelo, Milagros, He, Jinhong, Rahimlou, Saleh, Abarenkov, Kessy, Brundrett, Mark C., Gomes, Sofia I.F., Merckx, Vincent, Tedersoo, Leho
Published in The New phytologist (01.08.2020)
Published in The New phytologist (01.08.2020)
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Journal Article
Tree diversity and species identity effects on soil fungi, protists and animals are context dependent
Tedersoo, Leho, Bahram, Mohammad, Cajthaml, Tomáš, Põlme, Sergei, Hiiesalu, Indrek, Anslan, Sten, Harend, Helery, Buegger, Franz, Pritsch, Karin, Koricheva, Julia, Abarenkov, Kessy
Published in The ISME Journal (01.02.2016)
Published in The ISME Journal (01.02.2016)
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Journal Article
Global diversity and geography of soil fungi
Tedersoo, Leho, Bahram, Mohammad, Põlme, Sergei, Kõljalg, Urmas, Yorou, Nourou S., Wijesundera, Ravi, Ruiz, Luis Villarreal, Vasco-Palacios, Aída M., Thu, Pham Quang, Suija, Ave, Smith, Matthew E., Sharp, Cathy, Saluveer, Erki, Saitta, Alessandro, Rosas, Miguel, Riit, Taavi, Ratkowsky, David, Pritsch, Karin, Põldmaa, Kadri, Piepenbring, Meike, Phosri, Cherdchai, Peterson, Marko, Parts, Kaarin, Pärtel, Kadri, Otsing, Eveli, Nouhra, Eduardo, Njouonkou, André L., Nilsson, R. Henrik, Morgado, Luis N., Mayor, Jordan, May, Tom W., Majuakim, Luiza, Lodge, D. Jean, Lee, Su See, Larsson, Karl-Henrik, Kohout, Petr, Hosaka, Kentaro, Hiiesalu, Indrek, Henkel, Terry W., Harend, Helery, Guo, Liang-dong, Greslebin, Alina, Grelet, Gwen, Geml, Jozsef, Gates, Genevieve, Dunstan, William, Dunk, Chris, Drenkhan, Rein, Dearnaley, John, De Kesel, André, Dang, Tan, Chen, Xin, Buegger, Franz, Brearley, Francis Q., Bonito, Gregory, Anslan, Sten, Abell, Sandra, Abarenkov, Kessy
Published in Science (American Association for the Advancement of Science) (28.11.2014)
Published in Science (American Association for the Advancement of Science) (28.11.2014)
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Journal Article
Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide
Lindahl, Björn D., Nilsson, R. Henrik, Tedersoo, Leho, Abarenkov, Kessy, Carlsen, Tor, Kjøller, Rasmus, Kõljalg, Urmas, Pennanen, Taina, Rosendahl, Søren, Stenlid, Jan, Kauserud, Håvard
Published in The New phytologist (01.07.2013)
Published in The New phytologist (01.07.2013)
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Journal Article
Fungal functional ecology: bringing a trait‐based approach to plant‐associated fungi
Zanne, Amy E., Abarenkov, Kessy, Afkhami, Michelle E., Aguilar‐Trigueros, Carlos A., Bates, Scott, Bhatnagar, Jennifer M., Busby, Posy E., Christian, Natalie, Cornwell, William K., Crowther, Thomas W., Flores‐Moreno, Habacuc, Floudas, Dimitrios, Gazis, Romina, Hibbett, David, Kennedy, Peter, Lindner, Daniel L., Maynard, Daniel S., Milo, Amy M., Nilsson, Rolf Henrik, Powell, Jeff, Schildhauer, Mark, Schilling, Jonathan, Treseder, Kathleen K.
Published in Biological reviews of the Cambridge Philosophical Society (01.04.2020)
Published in Biological reviews of the Cambridge Philosophical Society (01.04.2020)
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Journal Article
Resistance and resilience of the forest soil microbiome to logging-associated compaction
Hartmann, Martin, Niklaus, Pascal A, Zimmermann, Stephan, Schmutz, Stefan, Kremer, Johann, Abarenkov, Kessy, Lüscher, Peter, Widmer, Franco, Frey, Beat
Published in The ISME Journal (01.01.2014)
Published in The ISME Journal (01.01.2014)
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Journal Article
Towards a unified paradigm for sequence-based identification of fungi
Kõljalg, Urmas, Nilsson, R. Henrik, Abarenkov, Kessy, Tedersoo, Leho, Taylor, Andy F. S., Bahram, Mohammad, Bates, Scott T., Bruns, Thomas D., Bengtsson-Palme, Johan, Callaghan, Tony M., Douglas, Brian, Drenkhan, Tiia, Eberhardt, Ursula, Dueñas, Margarita, Grebenc, Tine, Griffith, Gareth W., Hartmann, Martin, Kirk, Paul M., Kohout, Petr, Larsson, Ellen, Lindahl, Björn D., Lücking, Robert, Martín, María P., Matheny, P. Brandon, Nguyen, Nhu H., Niskanen, Tuula, Oja, Jane, Peay, Kabir G., Peintner, Ursula, Peterson, Marko, Põldmaa, Kadri, Saag, Lauri, Saar, Irja, Schüßler, Arthur, Scott, James A., Senés, Carolina, Smith, Matthew E., Suija, Ave, Taylor, D. Lee, Telleria, M. Teresa, Weiss, Michael, Larsson, Karl-Henrik
Published in Molecular ecology (01.11.2013)
Published in Molecular ecology (01.11.2013)
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Journal Article
Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences
Abarenkov, Kessy, Somervuo, Panu, Nilsson, R. Henrik, Kirk, Paul M., Huotari, Tea, Abrego, Nerea, Ovaskainen, Otso
Published in The New phytologist (01.10.2018)
Published in The New phytologist (01.10.2018)
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Journal Article
FungalRoot v.2.0 – an empirical database of plant mycorrhizal traits: A response to Bueno et al . (2021) ‘Towards a consistent benchmark for plant mycorrhizal association databases’
Soudzilovskaia, Nadejda A., He, Jinhong, Rahimlou, Saleh, Abarenkov, Kessy, Brundrett, Mark C., Tedersoo, Leho
Published in The New phytologist (01.09.2022)
Published in The New phytologist (01.09.2022)
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Journal Article
Global patterns in endemicity and vulnerability of soil fungi
Tedersoo, Leho, Mikryukov, Vladimir, Zizka, Alexander, Bahram, Mohammad, Hagh‐Doust, Niloufar, Anslan, Sten, Prylutskyi, Oleh, Delgado‐Baquerizo, Manuel, Maestre, Fernando T., Pärn, Jaan, Öpik, Maarja, Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco‐Palacios, Aída‐M., Saitta, Alessandro, Rinaldi, Andrea C., Verbeken, Annemieke, Sulistyo, Bobby P., Tamgnoue, Boris, Furneaux, Brendan, Ritter, Camila Duarte, Nyamukondiwa, Casper, Sharp, Cathy, Marín, César, Gohar, Daniyal, Klavina, Darta, Sharmah, Dipon, Dai, Dong Qin, Nouhra, Eduardo, Biersma, Elisabeth Machteld, Rähn, Elisabeth, Cameron, Erin K., De Crop, Eske, Otsing, Eveli, Davydov, Evgeny A., Brearley, Francis Q., Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel C., Heilmann‐Clausen, Jacob, Ankuda, Jelena, Kupagme, John Y., Maciá‐Vicente, Jose G., Fovo, Joseph Djeugap, Geml, József, Alatalo, Juha M., Alvarez‐Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadri, Bråthen, Kari Anne, Tchan, Kassim I., Armolaitis, Kęstutis, Hyde, Kevin D., Newsham, Kevin K., Lateef, Adebola A., Tiirmann, Liis, Hansson, Linda, Lamit, Louis J., Saba, Malka, Tuomi, Maria, Gryzenhout, Marieka, Bauters, Marijn, Piepenbring, Meike, Wijayawardene, Nalin, Yorou, Nourou S., Kurina, Olavi, Mortimer, Peter E., Meidl, Peter, Kohout, Petr, Nilsson, Rolf Henrik, Puusepp, Rasmus, Drenkhan, Rein, Garibay‐Orijel, Roberto, Godoy, Roberto, Alkahtani, Saad, Rahimlou, Saleh, Dudov, Sergey V., Põlme, Sergei, Ghosh, Soumya, Mundra, Sunil, Ahmed, Talaat, Netherway, Tarquin, Henkel, Terry W., Roslin, Tomas, Nteziryayo, Vincent, Fedosov, Vladimir E., Onipchenko, Vladimir G., Yasanthika, W. A. Erandi, Lim, Young Woon, Soudzilovskaia, Nadejda A., Antonelli, Alexandre, Kõljalg, Urmas, Abarenkov, Kessy
Published in Global change biology (01.11.2022)
Published in Global change biology (01.11.2022)
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Journal Article
DNA barcoding of fungal specimens using PacBio long‐read high‐throughput sequencing
Runnel, Kadri, Abarenkov, Kessy, Copoț, Ovidiu, Mikryukov, Vladimir, Kõljalg, Urmas, Saar, Irja, Tedersoo, Leho
Published in Molecular ecology resources (01.11.2022)
Published in Molecular ecology resources (01.11.2022)
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Journal Article
Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe
Tedersoo, Leho, Anslan, Sten, Bahram, Mohammad, Drenkhan, Rein, Pritsch, Karin, Buegger, Franz, Padari, Allar, Hagh-Doust, Niloufar, Mikryukov, Vladimir, Gohar, Daniyal, Amiri, Rasekh, Hiiesalu, Indrek, Lutter, Reimo, Rosenvald, Raul, Rähn, Elisabeth, Adamson, Kalev, Drenkhan, Tiia, Tullus, Hardi, Jürimaa, Katrin, Sibul, Ivar, Otsing, Eveli, Põlme, Sergei, Metslaid, Marek, Loit, Kaire, Agan, Ahto, Puusepp, Rasmus, Varik, Inge, Kõljalg, Urmas, Abarenkov, Kessy
Published in Frontiers in microbiology (04.09.2020)
Published in Frontiers in microbiology (04.09.2020)
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Journal Article
Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data
Bengtsson‐Palme, Johan, Ryberg, Martin, Hartmann, Martin, Branco, Sara, Wang, Zheng, Godhe, Anna, Wit, Pierre, Sánchez‐García, Marisol, Ebersberger, Ingo, Sousa, Filipe, Amend, Anthony, Jumpponen, Ari, Unterseher, Martin, Kristiansson, Erik, Abarenkov, Kessy, Bertrand, Yann J. K., Sanli, Kemal, Eriksson, K. Martin, Vik, Unni, Veldre, Vilmar, Nilsson, R. Henrik, Bunce, Michael
Published in Methods in ecology and evolution (01.10.2013)
Published in Methods in ecology and evolution (01.10.2013)
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Journal Article
Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon-specific primers
Tedersoo, Leho, Jairus, Teele, Horton, Bryony M., Abarenkov, Kessy, Suvi, Triin, Saar, Irja, Kõljalg, Urmas
Published in The New phytologist (01.10.2008)
Published in The New phytologist (01.10.2008)
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Journal Article
The UNITE database for molecular identification of fungi – recent updates and future perspectives
Abarenkov, Kessy, Nilsson, R. Henrik, Larsson, Karl-Henrik, Alexander, Ian J., Eberhardt, Ursula, Erland, Susanne, Høiland, Klaus, Kjøller, Rasmus, Larsson, Ellen, Pennanen, Taina, Sen, Robin, Taylor, Andy F. S., Tedersoo, Leho, Ursing, Björn M., Vrålstad, Trude, Liimatainen, Kare, Peintner, Ursula, Kõljalg, Urmas
Published in The New phytologist (01.04.2010)
Published in The New phytologist (01.04.2010)
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Journal Article
Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective
Nilsson, R Henrik, Ryberg, Martin, Kristiansson, Erik, Abarenkov, Kessy, Larsson, Karl-Henrik, Kõljalg, Urmas
Published in PloS one (20.12.2006)
Published in PloS one (20.12.2006)
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