PheMap: a multi-resource knowledge base for high-throughput phenotyping within electronic health records
Zheng, Neil S, Feng, QiPing, Kerchberger, V Eric, Zhao, Juan, Edwards, Todd L, Cox, Nancy J, Stein, C Michael, Roden, Dan M, Denny, Joshua C, Wei, Wei-Qi
Published in Journal of the American Medical Informatics Association : JAMIA (01.11.2020)
Published in Journal of the American Medical Informatics Association : JAMIA (01.11.2020)
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Journal Article
Plasma sRAGE Acts as a Genetically Regulated Causal Intermediate in Sepsis-associated Acute Respiratory Distress Syndrome
Jones, Tiffanie K, Feng, Rui, Kerchberger, V Eric, Reilly, John P, Anderson, Brian J, Shashaty, Michael G S, Wang, Fan, Dunn, Thomas G, Riley, Thomas R, Abbott, Jason, Ittner, Caroline A G, Christiani, David C, Mikacenic, Carmen, Wurfel, Mark M, Ware, Lorraine B, Calfee, Carolyn S, Matthay, Michael A, Christie, Jason D, Meyer, Nuala J
Published in American journal of respiratory and critical care medicine (01.01.2020)
Published in American journal of respiratory and critical care medicine (01.01.2020)
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Journal Article
An updated, computable MEDication-Indication resource for biomedical research
Zheng, Neil S, Kerchberger, V Eric, Borza, Victor A, Eken, H Nur, Smith, Joshua C, Wei, Wei-Qi
Published in Scientific reports (23.09.2021)
Published in Scientific reports (23.09.2021)
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Journal Article
De-black-boxing health AI: demonstrating reproducible machine learning computable phenotypes using the N3C-RECOVER Long COVID model in the All of Us data repository
Pfaff, Emily R, Girvin, Andrew T, Crosskey, Miles, Gangireddy, Srushti, Master, Hiral, Wei, Wei-Qi, Kerchberger, V Eric, Weiner, Mark, Harris, Paul A, Basford, Melissa, Lunt, Chris, Chute, Christopher G, Moffitt, Richard A, Haendel, Melissa
Published in Journal of the American Medical Informatics Association : JAMIA (20.06.2023)
Published in Journal of the American Medical Informatics Association : JAMIA (20.06.2023)
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Journal Article
High-throughput framework for genetic analyses of adverse drug reactions using electronic health records
Zheng, Neil S, Stone, Cosby A, Jiang, Lan, Shaffer, Christian M, Kerchberger, V Eric, Chung, Cecilia P, Feng, QiPing, Cox, Nancy J, Stein, C Michael, Roden, Dan M, Denny, Joshua C, Phillips, Elizabeth J, Wei, Wei-Qi
Published in PLoS genetics (01.06.2021)
Published in PLoS genetics (01.06.2021)
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Journal Article
Genome-wide association analyses of common infections in a large practice-based biobank
Jiang, Lan, Kerchberger, V Eric, Shaffer, Christian, Dickson, Alyson L, Ormseth, Michelle J, Daniel, Laura L, Leon, Barbara G Carranza, Cox, Nancy J, Chung, Cecilia P, Wei, Wei-Qi, Stein, C Michael, Feng, QiPing
Published in BMC genomics (27.09.2022)
Published in BMC genomics (27.09.2022)
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Journal Article
Mapping the Read2/CTV3 controlled clinical terminologies to Phecodes in UK Biobank primary care electronic health records: implementation and evaluation
Denaxas, Spiros, Liu, Ge, Feng, Qiping, Fatemifar, Ghazaleh, Bastarache, Lisa, Kerchberger, Eric V, Hingorani, Aroon D, Lumbers, Tom, Peterson, Josh F, Wei, Wei-Qi, Hemingway, Harry
Published in AMIA ... Annual Symposium proceedings (2021)
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Published in AMIA ... Annual Symposium proceedings (2021)
Journal Article
Host Response to Infection: Not All Lymphopenia Is Created Equal in SARS-CoV-2
Kerchberger, V Eric
Published in American journal of respiratory and critical care medicine (15.02.2024)
Published in American journal of respiratory and critical care medicine (15.02.2024)
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Journal Article
The relationship between high density lipoprotein cholesterol and sepsis: A clinical and genetic approach
Liu, Ge, Jiang, Lan, Kerchberger, V. Eric, Oeser, Annette, Ihegword, Andrea, Dickson, Alyson L., Daniel, Laura L., Shaffer, Christian, Linton, MacRae F., Cox, Nancy, Chung, Cecilia P., Wei, Wei‐Qi, Stein, C. Michael, Feng, QiPing
Published in Clinical and translational science (01.03.2023)
Published in Clinical and translational science (01.03.2023)
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Journal Article
Alveolar epithelial glycocalyx degradation mediates surfactant dysfunction and contributes to acute respiratory distress syndrome
Rizzo, Alicia N, Haeger, Sarah M, Oshima, Kaori, Yang, Yimu, Wallbank, Alison M, Jin, Ying, Lettau, Marie, McCaig, Lynda A, Wickersham, Nancy E, McNeil, J Brennan, Zakharevich, Igor, McMurtry, Sarah A, Langouët-Astrié, Christophe J, Kopf, Katrina W, Voelker, Dennis R, Hansen, Kirk C, Shaver, Ciara M, Kerchberger, V Eric, Peterson, Ryan A, Kuebler, Wolfgang M, Ochs, Matthias, Veldhuizen, Ruud Aw, Smith, Bradford J, Ware, Lorraine B, Bastarache, Julie A, Schmidt, Eric P
Published in JCI insight (25.01.2022)
Published in JCI insight (25.01.2022)
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Journal Article
Haptoglobin-2 variant increases susceptibility to acute respiratory distress syndrome during sepsis
Kerchberger, V Eric, Bastarache, Julie A, Shaver, Ciara M, Nagata, Hiromasa, McNeil, J Brennan, Landstreet, Stuart R, Putz, Nathan D, Yu, Wen-Kuang, Jesse, Jordan, Wickersham, Nancy E, Sidorova, Tatiana N, Janz, David R, Parikh, Chirag R, Siew, Edward D, Ware, Lorraine B
Published in JCI insight (01.11.2019)
Published in JCI insight (01.11.2019)
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Journal Article
Impact of Clinician Recognition of Acute Respiratory Distress Syndrome on Evidenced-Based Interventions in the Medical ICU
Kerchberger, V. Eric, Brown, Ryan M., Semler, Matthew W., Zhao, Zhiguo, Koyama, Tatsuki, Janz, David R., Bastarache, Julie A., Ware, Lorraine B.
Published in Critical care explorations (06.07.2021)
Published in Critical care explorations (06.07.2021)
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Journal Article
Development and External Validation of Models to Predict Persistent Hypoxemic Respiratory Failure for Clinical Trial Enrichment
Sathe, Neha A, Zelnick, Leila R, Morrell, Eric D, Bhatraju, Pavan K, Kerchberger, V Eric, Hough, Catherine L, Ware, Lorraine B, Fohner, Alison E, Wurfel, Mark M
Published in Critical care medicine (01.05.2024)
Published in Critical care medicine (01.05.2024)
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Journal Article
Large language models facilitate the generation of electronic health record phenotyping algorithms
Yan, Chao, Ong, Henry H, Grabowska, Monika E, Krantz, Matthew S, Su, Wu-Chen, Dickson, Alyson L, Peterson, Josh F, Feng, QiPing, Roden, Dan M, Stein, C Michael, Kerchberger, V Eric, Malin, Bradley A, Wei, Wei-Qi
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2024)
Published in Journal of the American Medical Informatics Association : JAMIA (01.09.2024)
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Journal Article
Identifying molecular phenotypes in sepsis: an analysis of two prospective observational cohorts and secondary analysis of two randomised controlled trials
Sinha, Pratik, Kerchberger, V Eric, Willmore, Andrew, Chambers, Julia, Zhuo, Hanjing, Abbott, Jason, Jones, Chayse, Wickersham, Nancy, Wu, Nelson, Neyton, Lucile, Langelier, Charles R, Mick, Eran, He, June, Jauregui, Alejandra, Churpek, Matthew M, Gomez, Antonio D, Hendrickson, Carolyn M, Kangelaris, Kirsten N, Sarma, Aartik, Leligdowicz, Aleksandra, Delucchi, Kevin L, Liu, Kathleen D, Russell, James A, Matthay, Michael A, Walley, Keith R, Ware, Lorraine B, Calfee, Carolyn S
Published in The lancet respiratory medicine (01.11.2023)
Published in The lancet respiratory medicine (01.11.2023)
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Journal Article
Causes and attributable fraction of death from ARDS in inflammatory phenotypes of sepsis
Evrard, Bruno, Sinha, Pratik, Delucchi, Kevin, Hendrickson, Carolyn M, Kangelaris, Kirsten N, Liu, Kathleen D, Willmore, Andrew, Wu, Nelson, Neyton, Lucile, Schmiege, Emma, Gomez, Antonio, Kerchberger, V Eric, Zalucky, Ann, Matthay, Michael A, Ware, Lorraine B, Calfee, Carolyn S
Published in Critical care (London, England) (14.05.2024)
Published in Critical care (London, England) (14.05.2024)
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Journal Article
Effect of a fluid bolus on cardiovascular collapse among critically ill adults undergoing tracheal intubation (PrePARE): a randomised controlled trial
Janz, David R, Casey, Jonathan D, Semler, Matthew W, Russell, Derek W, Dargin, James, Vonderhaar, Derek J, Dischert, Kevin M, West, Jason R, Stempek, Susan, Wozniak, Joanne, Caputo, Nicholas, Heideman, Brent E, Zouk, Aline N, Gulati, Swati, Stigler, William S, Bentov, Itay, Joffe, Aaron M, Rice, Todd W
Published in The lancet respiratory medicine (01.12.2019)
Published in The lancet respiratory medicine (01.12.2019)
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Journal Article
Novel Method for Noninvasive Sampling of the Distal Airspace in Acute Respiratory Distress Syndrome
McNeil, J Brennan, Shaver, Ciara M, Kerchberger, V Eric, Russell, Derek W, Grove, Brandon S, Warren, Melissa A, Wickersham, Nancy E, Ware, Lorraine B, McDonald, W Hayes, Bastarache, Julie A
Published in American journal of respiratory and critical care medicine (15.04.2018)
Published in American journal of respiratory and critical care medicine (15.04.2018)
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Journal Article