Integrative Regulatory Mapping Indicates that the RNA-Binding Protein HuR Couples Pre-mRNA Processing and mRNA Stability
Mukherjee, Neelanjan, Corcoran, David L., Nusbaum, Jeffrey D., Reid, David W., Georgiev, Stoyan, Hafner, Markus, Ascano, Manuel, Tuschl, Thomas, Ohler, Uwe, Keene, Jack D.
Published in Molecular cell (05.08.2011)
Published in Molecular cell (05.08.2011)
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The RNA binding protein DND1 is elevated in a subpopulation of pro-spermatogonia and targets chromatin modifiers and translational machinery during late gestation
Ruthig, Victor A, Hatkevich, Talia, Hardy, Josiah, Friedersdorf, Matthew B, Mayère, Chloé, Nef, Serge, Keene, Jack D, Capel, Blanche
Published in PLoS genetics (01.03.2023)
Published in PLoS genetics (01.03.2023)
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Post-transcriptional RNA regulons affecting cell cycle and proliferation
Blackinton, Jeff G., Keene, Jack D.
Published in Seminars in cell & developmental biology (01.10.2014)
Published in Seminars in cell & developmental biology (01.10.2014)
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PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data
Corcoran, David L, Georgiev, Stoyan, Mukherjee, Neelanjan, Gottwein, Eva, Skalsky, Rebecca L, Keene, Jack D, Ohler, Uwe
Published in Genome biology (18.08.2011)
Published in Genome biology (18.08.2011)
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SHAPE reveals transcript-wide interactions, complex structural domains, and protein interactions across the Xist lncRNA in living cells
Smola, Matthew J., Christy, Thomas W., Inoue, Kaoru, Nicholson, Cindo O., Friedersdorf, Matthew, Keene, Jack D., Lee, David M., Calabrese, J. Mauro, Weeks, Kevin M.
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2016)
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XRN1 stalling in the 5' UTR of Hepatitis C virus and Bovine Viral Diarrhea virus is associated with dysregulated host mRNA stability
Moon, Stephanie L, Blackinton, Jeffrey G, Anderson, John R, Dozier, Mary K, Dodd, Benjamin J T, Keene, Jack D, Wilusz, Carol J, Bradrick, Shelton S, Wilusz, Jeffrey
Published in PLoS pathogens (01.03.2015)
Published in PLoS pathogens (01.03.2015)
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Proteomic and immunologic analyses of brain tumor exosomes
Graner, Michael W, Alzate, Oscar, Dechkovskaia, Angelika M, Keene, Jack D, Sampson, John H, Mitchell, Duane A, Bigner, Darell D
Published in The FASEB journal (01.05.2009)
Published in The FASEB journal (01.05.2009)
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The RNA-binding protein DND1 acts sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming
Ruthig, Victor A, Friedersdorf, Matthew B, Garness, Jason A, Munger, Steve C, Bunce, Corey, Keene, Jack D, Capel, Blanche
Published in Development (Cambridge) (25.07.2019)
Published in Development (Cambridge) (25.07.2019)
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RNA Binding Proteins Control Transdifferentiation of Hepatic Stellate Cells into Myofibroblasts
Wang, Sihyung, Jung, Youngmi, Hyun, Jeongeun, Friedersdorf, Matthew, Oh, Seh-Hoon, Kim, Jieun, Premont, Richard T., Keene, Jack D., Diehl, Anna Mae
Published in Cellular physiology and biochemistry (01.08.2018)
Published in Cellular physiology and biochemistry (01.08.2018)
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A transgenic DND1GFP fusion allele reports in vivo expression and RNA-binding targets in undifferentiated mouse germ cells
Ruthig, Victor A., Yokonishi, Tetsuhiro, Friedersdorf, Matthew B., Batchvarova, Sofia, Hardy, Josiah, Garness, Jason A., Keene, Jack D., Capel, Blanche
Published in Biology of reproduction (01.04.2021)
Published in Biology of reproduction (01.04.2021)
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