A coarse-grained model of the effective interaction for charged amino acid residues and its application to formation of GCN4-pLI tetramer
Kawaguchi, Kazutomo, Nakagawa, Satoshi, Kurniawan, Isman, Kodama, Koichi, Arwansyah, Muhammad Saleh, Nagao, Hidemi
Published in Molecular physics (19.03.2018)
Published in Molecular physics (19.03.2018)
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A simple coarse-grained model for interacting protein complex
Kawaguchi, Kazutomo, Nakagawa, Satoshi, Kinoshita, Shogo, Wada, Makoto, Saito, Hiroaki, Nagao, Hidemi
Published in Molecular physics (04.03.2017)
Published in Molecular physics (04.03.2017)
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Journal Article
Molecular dynamics study of binary POPC bilayers: molecular condensing effects on membrane structure and dynamics
Saito, Hiroaki, Morishita, Tetsuya, Mizukami, Taku, Nishiyama, Ken-ichi, Kawaguchi, Kazutomo, Nagao, Hidemi
Published in Journal of physics. Conference series (01.12.2018)
Published in Journal of physics. Conference series (01.12.2018)
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Journal Article
Free energy profiles of lipid translocation across pure POPC and POPC/CHOL bilayer: all-atom molecular dynamics study
Saito, Hiroaki, Morishita, Tetsuya, Mizukami, Taku, Nishiyama, Ken-ichi, Kawaguchi, Kazutomo, Nagao, Hidemi
Published in Journal of physics. Conference series (01.10.2019)
Published in Journal of physics. Conference series (01.10.2019)
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Journal Article
Analysis of water molecules around GTP in Hras-GTP complex and GDP in Hras-GDP complex by molecular dynamics simulations
Miyakawa, Takeshi, Morikawa, Ryota, Takasu, Masako, Sugimori, Kimikazu, Kawaguchi, Kazutomo, Saito, Hiroaki, Nagao, Hidemi
Published in Molecular physics (16.02.2014)
Published in Molecular physics (16.02.2014)
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Journal Article
Molecular dynamics simulations of the Hras-GTP complex and the Hras-GDP complex
Miyakawa, Takeshi, Morikawa, Ryota, Takasu, Masako, Sugimori, Kimikazu, Mizukami, Taku, Kawaguchi, Kazutomo, Saito, Hiroaki, Nagao, Hidemi
Published in International journal of quantum chemistry (05.11.2013)
Published in International journal of quantum chemistry (05.11.2013)
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Stress tensor analysis of the protein quake of photoactive yellow protein
KOIKE, Kana, KAWAGUCHI, Kazutomo, YAMATO, Takahisa
Published in Physical chemistry chemical physics : PCCP (14.03.2008)
Published in Physical chemistry chemical physics : PCCP (14.03.2008)
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Journal Article
Molecular dynamics study of gramicidin a in lipid bilayer: Structure and lateral pressure profile
Saito, Hiroaki, Iwayama, Masashi, Takagi, Hiroyuki, Nishimura, Megumi, Miyakawa, Takeshi, Kawaguchi, Kazutomo, Takasu, Masako, Mizukami, Taku, Nagao, Hidemi
Published in International journal of quantum chemistry (15.12.2012)
Published in International journal of quantum chemistry (15.12.2012)
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Journal Article
計算化学的手法による水/オクタノール分配係数の研究
兒玉, 浩一, Saleh, Arwansyah Muhammad, 川口, 一朋, 松井, 亨, 重田, 育照, 長尾, 秀実
Published in Journal of Computer Chemistry, Japan (2019)
Published in Journal of Computer Chemistry, Japan (2019)
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Theoretical study of conformational transition of CDK4 by association of cyclin D3
Kawaguchi, Kazutomo, Arwansyah, Muhammad Saleh, Kataoka, Tatsuki, Nagao, Hidemi
Published in Molecular physics (02.09.2019)
Published in Molecular physics (02.09.2019)
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