Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection
Kaul, Drishti, Rathnasinghe, Raveen, Ferres, Marcela, Tan, Gene S., Barrera, Aldo, Pickett, Brett E., Methe, Barbara A., Das, Suman R., Budnik, Isolda, Halpin, Rebecca A., Wentworth, David, Schmolke, Mirco, Mena, Ignacio, Albrecht, Randy A., Singh, Indresh, Nelson, Karen E., García-Sastre, Adolfo, Dupont, Chris L., Medina, Rafael A.
Published in Nature communications (21.05.2020)
Published in Nature communications (21.05.2020)
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Journal Article
Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm
Michaud, Jennifer M., Thompson, Luke R., Kaul, Drishti, Espinoza, Josh L., Richter, R. Alexander, Xu, Zhenjiang Zech, Lee, Christopher, Pham, Kevin M., Beall, Charlotte M., Malfatti, Francesca, Azam, Farooq, Knight, Rob, Burkart, Michael D., Dupont, Christopher L., Prather, Kimberly A.
Published in Nature communications (22.05.2018)
Published in Nature communications (22.05.2018)
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Journal Article
Abundant nitrite-oxidizing metalloenzymes in the mesopelagic zone of the tropical Pacific Ocean
Saito, Mak A., McIlvin, Matthew R., Moran, Dawn M., Santoro, Alyson E., Dupont, Chris L., Rafter, Patrick A., Saunders, Jaclyn K., Kaul, Drishti, Lamborg, Carl H., Westley, Marian, Valois, Frederica, Waterbury, John B.
Published in Nature geoscience (01.05.2020)
Published in Nature geoscience (01.05.2020)
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Journal Article
Interplay of Staphylococcal and Host Proteases Promotes Skin Barrier Disruption in Netherton Syndrome
Williams, Michael R., Cau, Laura, Wang, Yichen, Kaul, Drishti, Sanford, James A., Zaramela, Livia S., Khalil, Shadi, Butcher, Anna M., Zengler, Karsten, Horswill, Alexander R., Dupont, Christopher L., Hovnanian, Alain, Gallo, Richard L.
Published in Cell reports (Cambridge) (03.03.2020)
Published in Cell reports (Cambridge) (03.03.2020)
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Journal Article
Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures
Badrane, Hassan, Cheng, Shaoji, Dupont, Christopher L., Hao, Binghua, Driscoll, Eileen, Morder, Kristin, Liu, Guojun, Newbrough, Anthony, Fleres, Giuseppe, Kaul, Drishti, Espinoza, Josh L., Clancy, Cornelius J., Nguyen, M. Hong
Published in Nature communications (22.09.2023)
Published in Nature communications (22.09.2023)
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Journal Article
Author Correction: Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection
Kaul, Drishti, Rathnasinghe, Raveen, Ferres, Marcela, Tan, Gene S., Barrera, Aldo, Pickett, Brett E., Methe, Barbara A., Das, Suman R., Budnik, Isolda, Halpin, Rebecca A., Wentworth, David, Schmolke, Mirco, Mena, Ignacio, Albrecht, Randy A., Singh, Indresh, Nelson, Karen E., García-Sastre, Adolfo, Dupont, Chris L., Medina, Rafael A.
Published in Nature communications (16.06.2020)
Published in Nature communications (16.06.2020)
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Journal Article
Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond
Lee, Zarraz M-P, Poret-Peterson, Amisha T, Siefert, Janet L, Kaul, Drishti, Moustafa, Ahmed, Allen, Andrew E, Dupont, Chris L, Eguiarte, Luis E, Souza, Valeria, Elser, James J
Published in Frontiers in microbiology (30.05.2017)
Published in Frontiers in microbiology (30.05.2017)
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Journal Article
Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes
Diner, Rachel E, Kaul, Drishti, Rabines, Ariel, Zheng, Hong, Steele, Joshua A, Griffith, John F, Allen, Andrew E
Published in mSystems (31.08.2021)
Published in mSystems (31.08.2021)
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Journal Article
Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes
Diner, Rachel E., Kaul, Drishti, Rabines, Ariel, Zheng, Hong, Steele, Joshua A., Griffith, John F., Allen, Andrew E.
Published in mSystems (01.08.2021)
Published in mSystems (01.08.2021)
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Journal Article
Distribution of mercury-cycling genes in the Arctic and equatorial Pacific Oceans and their relationship to mercury speciation
Bowman, Katlin L., Collins, R. Eric, Agather, Alison M., Lamborg, Carl H., Hammerschmidt, Chad R., Kaul, Drishti, Dupont, Christopher L., Christensen, Geoff A., Elias, Dwayne A.
Published in Limnology and oceanography (01.01.2020)
Published in Limnology and oceanography (01.01.2020)
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Journal Article
Plastics select for distinct early colonizing microbial populations with reproducible traits across environmental gradients
Bos, Ryan P., Kaul, Drishti, Zettler, Erik R., Hoffman, Jeffrey M., Dupont, Christopher L., Amaral‐Zettler, Linda A., Mincer, Tracy J.
Published in Environmental microbiology (01.12.2023)
Published in Environmental microbiology (01.12.2023)
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Journal Article
Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean
Saunders, Jaclyn K, McIlvin, Matthew R, Dupont, Chris L, Kaul, Drishti, Moran, Dawn M, Horner, Tristan, Laperriere, Sarah M, Webb, Eric A, Bosak, Tanja, Santoro, Alyson E, Saito, Mak A
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2022)
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Journal Article
Abstract 3489: MetFlow: Automated nextflow pipeline for Ion AmpliSeq methylation assay designs
Bedre, Renesh, Kaul, Drishti, Sharma, Anupma, Hatch, Andrew, Pickle, Loni, Li, Na, Hyland, Fiona
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Journal Article
Distribution of mercury-cycling genes in the Arctic and equatorial Pacific Oceans and their relationship to mercury speciation
Bowman, Katlin, Collins, Eric, Agather, Alison, Lamborg, Carl, Hammerschmidt, Chad, Kaul, Drishti, Dupont, Christopher, Christensen, Geoffrey A., Elias, Dwayne A.
Published in Limnology and oceanography (26.08.2019)
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Published in Limnology and oceanography (26.08.2019)
Journal Article
Epistasis reduces fitness costs of influenza A virus escape from stem-binding antibodies
Lee, Chung-Young, Raghunathan, Vedhika, Caceres, C Joaquin, Geiger, Ginger, Seibert, Brittany, Cargnin Faccin, Flavio, Gay, L Claire, Ferreri, Lucas M, Kaul, Drishti, Wrammert, Jens, Tan, Gene S, Perez, Daniel R, Lowen, Anice C
Published in Proceedings of the National Academy of Sciences - PNAS (25.04.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (25.04.2023)
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Journal Article
Sierra Nevada mountain lake microbial communities are structured by temperature, resources and geographic location
Schulhof, Marika A., Allen, Andrew E., Allen, Eric E., Mladenov, Natalie, McCrow, John P., Jones, Natalie T., Blanton, Jessica, Cavalheri, Hamanda B., Kaul, Drishti, Symons, Celia C., Shurin, Jonathan B.
Published in Molecular ecology (01.06.2020)
Published in Molecular ecology (01.06.2020)
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Journal Article
Blowin’ in the wind: Dispersal, structure, and metacommunity dynamics of aeolian diatoms in the McMurdo Sound region, Antarctica
Schulte, Nicholas O., Khan, Alia L., Smith, Emma W., Zoumplis, Angela, Kaul, Drishti, Allen, Andrew E., Adams, Byron J., McKnight, Diane M., Wetherbee, R.
Published in Journal of phycology (01.02.2022)
Published in Journal of phycology (01.02.2022)
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Journal Article
Genetic diversity of clinical and environmental Mucorales isolates obtained from an investigation of mucormycosis cases among solid organ transplant recipients
Nguyen, M Hong, Kaul, Drishti, Muto, Carlene, Cheng, Shaoji J, Richter, R Alex, Bruno, Vincent M, Liu, Guojun, Beyhan, Sinem, Sundermann, Alexander J, Mounaud, Stephanie, Pasculle, A William, Nierman, William C, Driscoll, Eileen, Cumbie, Richard, Clancy, Cornelius J, Dupont, Christopher L
Published in Microbial genomics (01.12.2020)
Published in Microbial genomics (01.12.2020)
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Journal Article
Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures
Badrane, Hassan, Cheng, Shaoji, Dupont, Chris, Hao, Binghua, Driscoll, Eileen, Morder, Kristen, Liu, Guojun, Newbrough, Anthony, Fleres, Giuseppe, Kaul, Drishti, Espinoza, Josh, Clancy, Cornelius, Nguyen, Minh Hong
Published in Research square (03.04.2023)
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Published in Research square (03.04.2023)
Journal Article