Clinical-Grade Detection of Microsatellite Instability in Colorectal Tumors by Deep Learning
Echle, Amelie, Grabsch, Heike Irmgard, Quirke, Philip, van den Brandt, Piet A., West, Nicholas P., Hutchins, Gordon G.A., Heij, Lara R., Tan, Xiuxiang, Richman, Susan D., Krause, Jeremias, Alwers, Elizabeth, Jenniskens, Josien, Offermans, Kelly, Gray, Richard, Brenner, Hermann, Chang-Claude, Jenny, Trautwein, Christian, Pearson, Alexander T., Boor, Peter, Luedde, Tom, Gaisa, Nadine Therese, Hoffmeister, Michael, Kather, Jakob Nikolas
Published in Gastroenterology (New York, N.Y. 1943) (01.10.2020)
Published in Gastroenterology (New York, N.Y. 1943) (01.10.2020)
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Journal Article
Classical mathematical models for prediction of response to chemotherapy and immunotherapy
Ghaffari Laleh, Narmin, Loeffler, Chiara Maria Lavinia, Grajek, Julia, Staňková, Kateřina, Pearson, Alexander T, Muti, Hannah Sophie, Trautwein, Christian, Enderling, Heiko, Poleszczuk, Jan, Kather, Jakob Nikolas
Published in PLoS computational biology (04.02.2022)
Published in PLoS computational biology (04.02.2022)
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Journal Article
Artificial intelligence to identify genetic alterations in conventional histopathology
Cifci, Didem, Foersch, Sebastian, Kather, Jakob Nikolas
Published in The Journal of pathology (01.07.2022)
Published in The Journal of pathology (01.07.2022)
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Journal Article
Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer
Kather, Jakob Nikolas, Pearson, Alexander T., Halama, Niels, Jäger, Dirk, Krause, Jeremias, Loosen, Sven H., Marx, Alexander, Boor, Peter, Tacke, Frank, Neumann, Ulf Peter, Grabsch, Heike I., Yoshikawa, Takaki, Brenner, Hermann, Chang-Claude, Jenny, Hoffmeister, Michael, Trautwein, Christian, Luedde, Tom
Published in Nature medicine (01.07.2019)
Published in Nature medicine (01.07.2019)
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Journal Article
Predicting survival from colorectal cancer histology slides using deep learning: A retrospective multicenter study
Kather, Jakob Nikolas, Krisam, Johannes, Charoentong, Pornpimol, Luedde, Tom, Herpel, Esther, Weis, Cleo-Aron, Gaiser, Timo, Marx, Alexander, Valous, Nektarios A, Ferber, Dyke, Jansen, Lina, Reyes-Aldasoro, Constantino Carlos, Zörnig, Inka, Jäger, Dirk, Brenner, Hermann, Chang-Claude, Jenny, Hoffmeister, Michael, Halama, Niels
Published in PLoS medicine (24.01.2019)
Published in PLoS medicine (24.01.2019)
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Journal Article
Multi-class texture analysis in colorectal cancer histology
Kather, Jakob Nikolas, Weis, Cleo-Aron, Bianconi, Francesco, Melchers, Susanne M., Schad, Lothar R., Gaiser, Timo, Marx, Alexander, Zöllner, Frank Gerrit
Published in Scientific reports (16.06.2016)
Published in Scientific reports (16.06.2016)
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Journal Article
Adversarial attacks and adversarial robustness in computational pathology
Ghaffari Laleh, Narmin, Truhn, Daniel, Veldhuizen, Gregory Patrick, Han, Tianyu, van Treeck, Marko, Buelow, Roman D., Langer, Rupert, Dislich, Bastian, Boor, Peter, Schulz, Volkmar, Kather, Jakob Nikolas
Published in Nature communications (29.09.2022)
Published in Nature communications (29.09.2022)
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Journal Article
The future landscape of large language models in medicine
Clusmann, Jan, Kolbinger, Fiona R., Muti, Hannah Sophie, Carrero, Zunamys I., Eckardt, Jan-Niklas, Laleh, Narmin Ghaffari, Löffler, Chiara Maria Lavinia, Schwarzkopf, Sophie-Caroline, Unger, Michaela, Veldhuizen, Gregory P., Wagner, Sophia J., Kather, Jakob Nikolas
Published in Communications medicine (10.10.2023)
Published in Communications medicine (10.10.2023)
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Journal Article
Pan-cancer image-based detection of clinically actionable genetic alterations
Kather, Jakob Nikolas, Heij, Lara R, Grabsch, Heike I, Loeffler, Chiara, Echle, Amelie, Muti, Hannah Sophie, Krause, Jeremias, Niehues, Jan M, Sommer, Kai A J, Bankhead, Peter, Kooreman, Loes F S, Schulte, Jefree J, Cipriani, Nicole A, Buelow, Roman D, Boor, Peter, Ortiz-Brüchle, Nadi-Na, Hanby, Andrew M, Speirs, Valerie, Kochanny, Sara, Patnaik, Akash, Srisuwananukorn, Andrew, Brenner, Hermann, Hoffmeister, Michael, van den Brandt, Piet A, Jäger, Dirk, Trautwein, Christian, Pearson, Alexander T, Luedde, Tom
Published in Nature cancer (01.08.2020)
Published in Nature cancer (01.08.2020)
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Journal Article
A multimodal comparison of latent denoising diffusion probabilistic models and generative adversarial networks for medical image synthesis
Müller-Franzes, Gustav, Niehues, Jan Moritz, Khader, Firas, Arasteh, Soroosh Tayebi, Haarburger, Christoph, Kuhl, Christiane, Wang, Tianci, Han, Tianyu, Nolte, Teresa, Nebelung, Sven, Kather, Jakob Nikolas, Truhn, Daniel
Published in Scientific reports (26.07.2023)
Published in Scientific reports (26.07.2023)
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Journal Article
Multimodal Deep Learning for Integrating Chest Radiographs and Clinical Parameters: A Case for Transformers
Khader, Firas, Müller-Franzes, Gustav, Wang, Tianci, Han, Tianyu, Tayebi Arasteh, Soroosh, Haarburger, Christoph, Stegmaier, Johannes, Bressem, Keno, Kuhl, Christiane, Nebelung, Sven, Kather, Jakob Nikolas, Truhn, Daniel
Published in Radiology (01.10.2023)
Published in Radiology (01.10.2023)
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Journal Article
Topography of cancer-associated immune cells in human solid tumors
Kather, Jakob Nikolas, Suarez-Carmona, Meggy, Charoentong, Pornpimol, Weis, Cleo-Aron, Hirsch, Daniela, Bankhead, Peter, Horning, Marcel, Ferber, Dyke, Kel, Ivan, Herpel, Esther, Schott, Sarah, Zörnig, Inka, Utikal, Jochen, Marx, Alexander, Gaiser, Timo, Brenner, Herrmann, Chang-Claude, Jenny, Hoffmeister, Michael, Jäger, Dirk, Halama, Niels
Published in eLife (04.09.2018)
Published in eLife (04.09.2018)
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Deep learning identifies inflamed fat as a risk factor for lymph node metastasis in early colorectal cancer
Brockmoeller, Scarlet, Echle, Amelie, Ghaffari Laleh, Narmin, Eiholm, Susanne, Malmstrøm, Marie Louise, Plato Kuhlmann, Tine, Levic, Katarina, Grabsch, Heike Irmgard, West, Nicholas P, Saldanha, Oliver Lester, Kouvidi, Katerina, Bono, Aurora, Heij, Lara R, Brinker, Titus J, Gögenür, Ismayil, Quirke, Philip, Kather, Jakob Nikolas
Published in The Journal of pathology (01.03.2022)
Published in The Journal of pathology (01.03.2022)
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Journal Article
Augmented non-hallucinating large language models as medical information curators
Gilbert, Stephen, Kather, Jakob Nikolas, Hogan, Aidan
Published in NPJ digital medicine (23.04.2024)
Published in NPJ digital medicine (23.04.2024)
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