BioMart--biological queries made easy
Smedley, Damian, Haider, Syed, Ballester, Benoit, Holland, Richard, London, Darin, Thorisson, Gudmundur, Kasprzyk, Arek
Published in BMC genomics (14.01.2009)
Published in BMC genomics (14.01.2009)
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Journal Article
EnsMart: a generic system for fast and flexible access to biological data
Kasprzyk, Arek, Keefe, Damian, Smedley, Damian, London, Darin, Spooner, William, Melsopp, Craig, Hammond, Martin, Rocca-Serra, Philippe, Cox, Tony, Birney, Ewan
Published in Genome research (01.01.2004)
Published in Genome research (01.01.2004)
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Journal Article
Narrowing and genomic annotation of the commonly deleted region of the 5q− syndrome
Boultwood, Jacqueline, Fidler, Carrie, Strickson, Amanda J., Watkins, Fiona, Gama, Susana, Kearney, Lyndal, Tosi, Sabrina, Kasprzyk, Arek, Cheng, Jan-Fang, Jaju, Rina J., Wainscoat, James S.
Published in Blood (15.06.2002)
Published in Blood (15.06.2002)
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Journal Article
BioMart: driving a paradigm change in biological data management
Kasprzyk, Arek
Published in Database : the journal of biological databases and curation (01.01.2011)
Published in Database : the journal of biological databases and curation (01.01.2011)
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Journal Article
A SNP Map of the Rat Genome Generated from cDNA Sequences
Zimdahl, Heike, Nyakatura, Gerald, Brandt, Petra, Schulz, Herbert, Hummel, Oliver, Fartmann, Berthold, Brett, David, Droege, Marcus, Monti, Jan, Lee, Young-Ae, Sun, Yinyan, Zhao, Shaying, Winter, Eitan E., Porting, Chris P., Chen, Yuan, Kasprzyk, Arek, Birney, Ewan, Ganten, Detlev, Hubner, Norbert
Published in Science (American Association for the Advancement of Science) (06.02.2004)
Published in Science (American Association for the Advancement of Science) (06.02.2004)
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Journal Article
BioMart Central Portal--unified access to biological data
Haider, Syed, Ballester, Benoit, Smedley, Damian, Zhang, Junjun, Rice, Peter, Kasprzyk, Arek
Published in Nucleic acids research (01.07.2009)
Published in Nucleic acids research (01.07.2009)
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Journal Article
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
Durinck, Steffen, Moreau, Yves, Kasprzyk, Arek, Davis, Sean, De Moor, Bart, Brazma, Alvis, Huber, Wolfgang
Published in Bioinformatics (15.08.2005)
Published in Bioinformatics (15.08.2005)
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Journal Article
International Cancer Genome Consortium Data Portal--a one-stop shop for cancer genomics data
Zhang, Junjun, Baran, Joachim, Cros, A, Guberman, Jonathan M, Haider, Syed, Hsu, Jack, Liang, Yong, Rivkin, Elena, Wang, Jianxin, Whitty, Brett, Wong-Erasmus, Marie, Yao, Long, Kasprzyk, Arek
Published in Database : the journal of biological databases and curation (01.01.2011)
Published in Database : the journal of biological databases and curation (01.01.2011)
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Journal Article
Pathway-based subnetworks enable cross-disease biomarker discovery
Haider, Syed, Yao, Cindy Q., Sabine, Vicky S., Grzadkowski, Michal, Stimper, Vincent, Starmans, Maud H. W., Wang, Jianxin, Nguyen, Francis, Moon, Nathalie C., Lin, Xihui, Drake, Camilla, Crozier, Cheryl A., Brookes, Cassandra L., van de Velde, Cornelis J. H., Hasenburg, Annette, Kieback, Dirk G., Markopoulos, Christos J., Dirix, Luc Y., Seynaeve, Caroline, Rea, Daniel W., Kasprzyk, Arek, Lambin, Philippe, Lio’, Pietro, Bartlett, John M. S., Boutros, Paul C.
Published in Nature communications (12.11.2018)
Published in Nature communications (12.11.2018)
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Journal Article
The prognostic value of temporal in vitro and in vivo derived hypoxia gene-expression signatures in breast cancer
Starmans, Maud H.W, Chu, Kenneth C, Haider, Syed, Nguyen, Francis, Seigneuric, Renaud, Magagnin, Michael G, Koritzinsky, Marianne, Kasprzyk, Arek, Boutros, Paul C, Wouters, Bradly G, Lambin, Philippe
Published in Radiotherapy and oncology (01.03.2012)
Published in Radiotherapy and oncology (01.03.2012)
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Journal Article
Integrating RAS status into prognostic signatures for adenocarcinomas of the lung
Starmans, Maud H W, Pintilie, Melania, Chan-Seng-Yue, Michelle, Moon, Nathalie C, Haider, Syed, Nguyen, Francis, Lau, Suzanne K, Liu, Ni, Kasprzyk, Arek, Wouters, Bradly G, Der, Sandy D, Shepherd, Frances A, Jurisica, Igor, Penn, Linda Z, Tsao, Ming-Sound, Lambin, Philippe, Boutros, Paul C
Published in Clinical cancer research (15.03.2015)
Published in Clinical cancer research (15.03.2015)
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Journal Article
BioMart: a data federation framework for large collaborative projects
Zhang, Junjun, Haider, Syed, Baran, Joachim, Cros, Anthony, Guberman, Jonathan M, Hsu, Jack, Liang, Yong, Yao, Long, Kasprzyk, Arek
Published in Database : the journal of biological databases and curation (01.01.2011)
Published in Database : the journal of biological databases and curation (01.01.2011)
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Journal Article
Cancer and genomics
Stratton, Michael R, Futreal, P. Andrew, Kasprzyk, Arek, Birney, Ewan, Mullikin, James C, Wooster, Richard
Published in Nature (London) (15.02.2001)
Published in Nature (London) (15.02.2001)
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Journal Article
BioMart: a data federation framework for large collaborative projects
Zhang, J., Haider, S., Baran, J., Cros, A., Guberman, J. M., Hsu, J., Liang, Y., Yao, L., Kasprzyk, A.
Published in Database : the journal of biological databases and curation (19.09.2011)
Published in Database : the journal of biological databases and curation (19.09.2011)
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Journal Article
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications
Katayama, Toshiaki, Wilkinson, Mark D, Vos, Rutger, Kawashima, Takeshi, Kawashima, Shuichi, Nakao, Mitsuteru, Yamamoto, Yasunori, Chun, Hong-Woo, Yamaguchi, Atsuko, Kawano, Shin, Aerts, Jan, Aoki-Kinoshita, Kiyoko F, Arakawa, Kazuharu, Aranda, Bruno, Bonnal, Raoul Jp, Fernández, José M, Fujisawa, Takatomo, Gordon, Paul Mk, Goto, Naohisa, Haider, Syed, Harris, Todd, Hatakeyama, Takashi, Ho, Isaac, Itoh, Masumi, Kasprzyk, Arek, Kido, Nobuhiro, Kim, Young-Joo, Kinjo, Akira R, Konishi, Fumikazu, Kovarskaya, Yulia, von Kuster, Greg, Labarga, Alberto, Limviphuvadh, Vachiranee, McCarthy, Luke, Nakamura, Yasukazu, Nam, Yunsun, Nishida, Kozo, Nishimura, Kunihiro, Nishizawa, Tatsuya, Ogishima, Soichi, Oinn, Tom, Okamoto, Shinobu, Okuda, Shujiro, Ono, Keiichiro, Oshita, Kazuki, Park, Keun-Joon, Putnam, Nicholas, Senger, Martin, Severin, Jessica, Shigemoto, Yasumasa, Sugawara, Hideaki, Taylor, James, Trelles, Oswaldo, Yamasaki, Chisato, Yamashita, Riu, Satoh, Noriyuki, Takagi, Toshihisa
Published in Journal of biomedical semantics (02.08.2011)
Published in Journal of biomedical semantics (02.08.2011)
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Journal Article
Cancer and genomics : The human genome
FUTREAL, P. Andrew, KASPRZYK, Arek, BIRNEY, Ewan, MULLIKIN, James C, WOOSTER, Richard, STRATTON, Michael R
Published in Nature (London) (2001)
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Published in Nature (London) (2001)
Journal Article
Network-Based Biomarkers Enable Cross-Disease Biomarker Discovery
Haider, Syed, Yao, Cindy, Sabine, Vicky, Grzadkowski, Michal, Stimper, Vincent, Starmans, Maud Hw, Wang, Jianxin, Nguyen, Francis, Moon, Nathalie C, Lin, Xihui, Drake, Camilla, Crozier, Cheryl A, Brookes, Cassandra, Cornelis Jh Van De Velde, Hasenburg, Annette, Kieback, Dirk, Markopoulos, Christos J, Dirix, Luc Y, Seynaeve, Caroline, Rea, Daniel W, Kasprzyk, Arek, Lio, Pietro, Lambin, Philippe, John Ms Bartlett, Boutros, Paul C
Published in bioRxiv (27.03.2018)
Published in bioRxiv (27.03.2018)
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Paper
Single-cell trisomy in hematologic malignancy
Kasprzyk, Arek, Mehta, Atul B., Secker-Walker, Lorna M.
Published in Cancer genetics and cytogenetics (01.11.1995)
Published in Cancer genetics and cytogenetics (01.11.1995)
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Journal Article