Adaptive laboratory evolution of native methanol assimilation in Saccharomyces cerevisiae
Espinosa, Monica I., Gonzalez-Garcia, Ricardo A., Valgepea, Kaspar, Plan, Manuel R., Scott, Colin, Pretorius, Isak S., Marcellin, Esteban, Paulsen, Ian T., Williams, Thomas C.
Published in Nature communications (04.11.2020)
Published in Nature communications (04.11.2020)
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Journal Article
Escherichia coli achieves faster growth by increasing catalytic and translation rates of proteins
Valgepea, Kaspar, Adamberg, Kaarel, Seiman, Andrus, Vilu, Raivo
Published in Molecular bioSystems (01.01.2013)
Published in Molecular bioSystems (01.01.2013)
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Journal Article
Low electric current in a bioelectrochemical system facilitates ethanol production from CO using CO-enriched mixed culture
Im, Chaeho, Kim, Minsoo, Kim, Jung Rae, Valgepea, Kaspar, Modin, Oskar, Nygård, Yvonne, Franzén, Carl Johan
Published in Frontiers in microbiology (29.08.2024)
Published in Frontiers in microbiology (29.08.2024)
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Journal Article
Enhancing CO2-Valorization Using Clostridium autoethanogenum for Sustainable Fuel and Chemicals Production
Heffernan, James K., Valgepea, Kaspar, de Souza Pinto Lemgruber, Renato, Casini, Isabella, Plan, Manuel, Tappel, Ryan, Simpson, Sean D., Köpke, Michael, Nielsen, Lars K., Marcellin, Esteban
Published in Frontiers in bioengineering and biotechnology (27.03.2020)
Published in Frontiers in bioengineering and biotechnology (27.03.2020)
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Journal Article
Coordinated activation of PTA-ACS and TCA cycles strongly reduces overflow metabolism of acetate in Escherichia coli
Peebo, Karl, Valgepea, Kaspar, Nahku, Ranno, Riis, Gethe, Õun, Mikk, Adamberg, Kaarel, Vilu, Raivo
Published in Applied microbiology and biotechnology (01.06.2014)
Published in Applied microbiology and biotechnology (01.06.2014)
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Journal Article
Faster Growth Enhances Low Carbon Fuel and Chemical Production Through Gas Fermentation
de Lima, Lorena Azevedo, Ingelman, Henri, Brahmbhatt, Kush, Reinmets, Kristina, Barry, Craig, Harris, Audrey, Marcellin, Esteban, Köpke, Michael, Valgepea, Kaspar
Published in Frontiers in bioengineering and biotechnology (12.04.2022)
Published in Frontiers in bioengineering and biotechnology (12.04.2022)
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Journal Article
Absolute Proteome Quantification in the Gas-Fermenting Acetogen Clostridium autoethanogenum
Valgepea, Kaspar, Talbo, Gert, Takemori, Nobuaki, Takemori, Ayako, Ludwig, Christina, Mahamkali, Vishnuvardhan, Mueller, Alexander P, Tappel, Ryan, Köpke, Michael, Simpson, Séan Dennis, Nielsen, Lars Keld, Marcellin, Esteban
Published in mSystems (26.04.2022)
Published in mSystems (26.04.2022)
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Journal Article
A TetR-Family Protein (CAETHG_0459) Activates Transcription From a New Promoter Motif Associated With Essential Genes for Autotrophic Growth in Acetogens
de Souza Pinto Lemgruber, Renato, Valgepea, Kaspar, Gonzalez Garcia, Ricardo Axayacatl, de Bakker, Christopher, Palfreyman, Robin William, Tappel, Ryan, Köpke, Michael, Simpson, Séan Dennis, Nielsen, Lars Keld, Marcellin, Esteban
Published in Frontiers in microbiology (15.11.2019)
Published in Frontiers in microbiology (15.11.2019)
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Journal Article
Adaptive laboratory evolution of Clostridium autoethanogenum to metabolize CO2 and H2 enhances growth rates in chemostat and unravels proteome and metabolome alterations
Heffernan, James, Garcia Gonzalez, R. Axayactl, Mahamkali, Vishnu, McCubbin, Tim, Daygon, Dara, Liu, Lian, Palfreyman, Robin, Harris, Audrey, Koepke, Michael, Valgepea, Kaspar, Nielsen, Lars Keld, Marcellin, Esteban
Published in Microbial biotechnology (01.04.2024)
Published in Microbial biotechnology (01.04.2024)
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Journal Article
Deletion of genes linked to the C1-fixing gene cluster affects growth, by-products, and proteome of Clostridium autoethanogenum
Nwaokorie, Ugochi Jennifer, Reinmets, Kristina, de Lima, Lorena Azevedo, Pawar, Pratik Rajendra, Shaikh, Kurshedaktar Majibullah, Harris, Audrey, Köpke, Michael, Valgepea, Kaspar
Published in Frontiers in bioengineering and biotechnology (15.05.2023)
Published in Frontiers in bioengineering and biotechnology (15.05.2023)
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Journal Article
Quantitative analysis of tetrahydrofolate metabolites from clostridium autoethanogenum
de Souza Pinto Lemgruber, Renato, Valgepea, Kaspar, Hodson, Mark P., Tappel, Ryan, Simpson, Sean D., Köpke, Michael, Nielsen, Lars K., Marcellin, Esteban
Published in Metabolomics (01.03.2018)
Published in Metabolomics (01.03.2018)
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Journal Article
H2 drives metabolic rearrangements in gas-fermenting Clostridium autoethanogenum
Valgepea, Kaspar, de Souza Pinto Lemgruber, Renato, Abdalla, Tanus, Binos, Steve, Takemori, Nobuaki, Takemori, Ayako, Tanaka, Yuki, Tappel, Ryan, Köpke, Michael, Simpson, Séan Dennis, Nielsen, Lars Keld, Marcellin, Esteban
Published in Biotechnology for biofuels (01.03.2018)
Published in Biotechnology for biofuels (01.03.2018)
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Journal Article
Advanced continuous cultivation methods for systems microbiology
Adamberg, Kaarel, Valgepea, Kaspar, Vilu, Raivo
Published in Microbiology (Society for General Microbiology) (01.09.2015)
Published in Microbiology (Society for General Microbiology) (01.09.2015)
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Journal Article
Advances in systems metabolic engineering of autotrophic carbon oxide-fixing biocatalysts towards a circular economy
Pavan, Marilene, Reinmets, Kristina, Garg, Shivani, Mueller, Alexander P., Marcellin, Esteban, Köpke, Michael, Valgepea, Kaspar
Published in Metabolic engineering (01.05.2022)
Published in Metabolic engineering (01.05.2022)
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Journal Article
Redox controls metabolic robustness in the gas-fermenting acetogen Clostridium autoethanogenum
Mahamkali, Vishnuvardhan, Valgepea, Kaspar, de Souza Pinto Lemgruber, Renato, Plan, Manuel, Tappel, Ryan, Köpke, Michael, Simpson, Séan Dennis, Nielsen, Lars Keld, Marcellin, Esteban
Published in Proceedings of the National Academy of Sciences - PNAS (09.06.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (09.06.2020)
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Journal Article
Proteome reallocation in Escherichia coli with increasing specific growth rate
Peebo, Karl, Valgepea, Kaspar, Maser, Andres, Nahku, Ranno, Adamberg, Kaarel, Vilu, Raivo
Published in Molecular bioSystems (01.04.2015)
Published in Molecular bioSystems (01.04.2015)
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Journal Article
Analytical tools for unravelling the metabolism of gas-fermenting Clostridia
Heffernan, James K, Mahamkali, Vishnu, Valgepea, Kaspar, Marcellin, Esteban, Nielsen, Lars K
Published in Current opinion in biotechnology (01.06.2022)
Published in Current opinion in biotechnology (01.06.2022)
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Journal Article
Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase
Valgepea, Kaspar, Adamberg, Kaarel, Nahku, Ranno, Lahtvee, Petri-Jaan, Arike, Liisa, Vilu, Raivo
Published in BMC systems biology (01.12.2010)
Published in BMC systems biology (01.12.2010)
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Journal Article