Sequence motif finder using memetic algorithm
Caldonazzo Garbelini, Jader M, Kashiwabara, André Y, Sanches, Danilo S
Published in BMC bioinformatics (03.01.2018)
Published in BMC bioinformatics (03.01.2018)
Get full text
Journal Article
cirCodAn: A GHMM-based tool for accurate prediction of coding regions in circRNA
Barbosa, Denilson Fagundes, Oliveira, Liliane Santana, Nachtigall, Pedro Gabriel, Valentini Junior, Rodolpho, de Souza, Nayane, Paschoal, Alexandre Rossi, Kashiwabara, André Yoshiaki
Published in Advances in protein chemistry and structural biology (2024)
Published in Advances in protein chemistry and structural biology (2024)
Get full text
Journal Article
DNA methylation landscape of hepatoblastomas reveals arrest at early stages of liver differentiation and cancer-related alterations
Maschietto, Mariana, Rodrigues, Tatiane Cristina, Kashiwabara, André Yoshiaki, de Araujo, Érica Sara Souza, Marques Aguiar, Talita Ferreira, da Costa, Cecilia Maria Lima, da Cunha, Isabela Werneck, Dos Reis Vasques, Luciana, Cypriano, Monica, Brentani, Helena, de Toledo, Silvia Regina Caminada, Pearson, Peter Lees, Carraro, Dirce Maria, Rosenberg, Carla, Krepischi, Ana C V
Published in Oncotarget (17.11.2017)
Published in Oncotarget (17.11.2017)
Get full text
Journal Article
ToPS: a framework to manipulate probabilistic models of sequence data
Kashiwabara, André Yoshiaki, Bonadio, Igor, Onuchic, Vitor, Amado, Felipe, Mathias, Rafael, Durham, Alan Mitchell
Published in PLoS computational biology (01.10.2013)
Published in PLoS computational biology (01.10.2013)
Get full text
Journal Article
DNA Methylation Levels of Melanoma Risk Genes Are Associated with Clinical Characteristics of Melanoma Patients
Carraro, Dirce M., Krepischi, Ana C. V., Rosenberg, Carla, Campos, Antonio H. J. F. M., Achatz, Maria I., Maria-Engler, Silvya Stuchi, Pennacchi, Paula C., Kashiwabara, André Y., Pramio, Dimitrius T., de Araújo, Érica S. S., Duprat, João P.
Published in BioMed research international (01.01.2015)
Published in BioMed research international (01.01.2015)
Get full text
Journal Article
LINE-1 hypermethylation in peripheral blood of cutaneous melanoma patients is associated with metastasis
De Araújo, Érica S S, Kashiwabara, André Y, Achatz, Maria I W, Moredo, Luciana F, De Sá, Bianca C S, Duprat, João P, Rosenberg, Carla, Carraro, Dirce M, Krepischi, Ana C V
Published in Melanoma research (01.04.2015)
Published in Melanoma research (01.04.2015)
Get more information
Journal Article
Decreasing the number of false positives in sequence classification
Machado-Lima, Ariane, Kashiwabara, André Yoshiaki, Durham, Alan Mitchell
Published in BMC genomics (22.12.2010)
Published in BMC genomics (22.12.2010)
Get full text
Journal Article
Mining Novel Candidate Imprinted Genes Using Genome-Wide Methylation Screening and Literature Review
Bonaldi, Adriano, Kashiwabara, André, Araújo, Érica S.de, Pereira, Lygia V., Paschoal, Alexandre R., Andozia, Mayra B., Villela, Darine, Rivas, Maria P., Suemoto, Claudia K., Pasqualucci, Carlos A., Grinberg, Lea T., Brentani, Helena, Maria-Engler, Silvya S., Carraro, Dirce M., Vianna-Morgante, Angela M., Rosenberg, Carla, Vasques, Luciana R., Krepischi, Ana
Published in Epigenomes (01.09.2017)
Published in Epigenomes (01.09.2017)
Get full text
Journal Article
CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts
Nachtigall, Pedro G, Kashiwabara, Andre Y, Durham, Alan M
Published in Briefings in bioinformatics (20.05.2021)
Published in Briefings in bioinformatics (20.05.2021)
Get full text
Journal Article
Characterization of SCAR markers of Eimeria spp. of domestic fowl and construction of a public relational database (The Eimeria SCARdb)
Fernandez, Sandra, Katsuyama, Ângela M., Kashiwabara, André Y., Madeira, Alda Maria B.N., Durham, Alan M., Gruber, Arthur
Published in FEMS microbiology letters (01.09.2004)
Published in FEMS microbiology letters (01.09.2004)
Get full text
Journal Article
A Novel Decomposing Model With Evolutionary Algorithms for Feature Selection in Long Non-Coding RNAs
Bonidia, Robson P., Machida, Jaqueline Sayuri, Negri, Tatianne C., Alves, Wonder A. L., Kashiwabara, Andre Y., Domingues, Douglas S., De Carvalho, Andre, Paschoal, Alexandre R., Sanches, Danilo S.
Published in IEEE access (2020)
Published in IEEE access (2020)
Get full text
Journal Article
Characterization of SCAR markers of Eimeria spp. of domestic fowl and construction of a public relational database (The Eimeria SCARdb)
Fernandez, Sandra, Katsuyama, Ângela M., Kashiwabara, André Y., Madeira, Alda Maria B.N., Durham, Alan M., Gruber, Arthur
Published in FEMS microbiology letters (01.09.2004)
Published in FEMS microbiology letters (01.09.2004)
Get full text
Journal Article
Feature extraction from complex networks: A case of study in genomic sequences classification
Conque, Bruno Mendes Moro, Kashiwabara, André Yoshiaki, Lopes, Fabrício Martins
Year of Publication 17.12.2014
Year of Publication 17.12.2014
Get full text
Journal Article
Aplicação do Rank-Based Ant System ao problema de múltiplos caixeiros viajantes no atendimento de ordens de serviço nas empresas de distribuição de energia elétrica
Barbosa, Denilson Fagundes, Silla Jr, Carlos Nascimento, Kashiwabara, André Yoshiaki
Published in iSys - Brazilian Journal of Information Systems (30.12.2015)
Published in iSys - Brazilian Journal of Information Systems (30.12.2015)
Get full text
Journal Article