Global monitoring of Salmonella serovar distribution from the World Health Organization Global Foodborne Infections Network Country Data Bank: results of quality assured laboratories from 2001 to 2007
Hendriksen, Rene S, Vieira, Antonio R, Karlsmose, Susanne, Lo Fo Wong, Danilo M A, Jensen, Arne B, Wegener, Henrik C, Aarestrup, Frank M
Published in Foodborne pathogens and disease (01.08.2011)
Published in Foodborne pathogens and disease (01.08.2011)
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Journal Article
Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach
Hendriksen, Rene S, Lukjancenko, Oksana, Munk, Patrick, Hjelmsø, Mathis H, Verani, Jennifer R, Ng'eno, Eric, Bigogo, Godfrey, Kiplangat, Samuel, Oumar, Traoré, Bergmark, Lasse, Röder, Timo, Neatherlin, John C, Clayton, Onyango, Hald, Tine, Karlsmose, Susanne, Pamp, Sünje J, Fields, Barry, Montgomery, Joel M, Aarestrup, Frank M
Published in PloS one (10.10.2019)
Published in PloS one (10.10.2019)
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Journal Article
Evaluation and validation of laboratory procedures for the surveillance of ESBL-, AmpC-, and carbapenemase-producing Escherichia coli from fresh meat and caecal samples
Hendriksen, Rene S., Cavaco, Lina M., Guerra, Beatriz, Bortolaia, Valeria, Agersø, Yvonne, Svendsen, Christina Aaby, Nielsen, Hanne Nørgaard, Kjeldgaard, Jette Sejer, Pedersen, Susanne Karlsmose, Fertner, Mette, Hasman, Henrik
Published in Frontiers in microbiology (09.08.2023)
Published in Frontiers in microbiology (09.08.2023)
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Journal Article
Results of Use of WHO Global Salm-Surv External Quality Assurance System for Antimicrobial Susceptibility Testing of Salmonella Isolates from 2000 to 2007
Hendriksen, Rene S, Seyfarth, Anne Mette, Jensen, Arne B, Whichard, Jean, Karlsmose, Susanne, Joyce, Kevin, Mikoleit, Matthew, Delong, Stephanie M, Weill, François-Xavier, Aidara-Kane, Awa, Lo Fo Wong, Danilo M.A, Angulo, Frederick J, Wegener, Henrik C, Aarestrup, Frank M
Published in Journal of Clinical Microbiology (01.01.2009)
Published in Journal of Clinical Microbiology (01.01.2009)
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Journal Article
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
Hendriksen, Rene S, Munk, Patrick, Njage, Patrick, van Bunnik, Bram, McNally, Luke, Lukjancenko, Oksana, Röder, Timo, Nieuwenhuijse, David, Pedersen, Susanne Karlsmose, Kjeldgaard, Jette, Kaas, Rolf S, Clausen, Philip Thomas Lanken Conradsen, Vogt, Josef Korbinian, Leekitcharoenphon, Pimlapas, van de Schans, Milou G M, Zuidema, Tina, de Roda Husman, Ana Maria, Rasmussen, Simon, Petersen, Bent, Amid, Clara, Cochrane, Guy, Sicheritz-Ponten, Thomas, Schmitt, Heike, Alvarez, Jorge Raul Matheu, Aidara-Kane, Awa, Pamp, Sünje J, Lund, Ole, Hald, Tine, Woolhouse, Mark, Koopmans, Marion P, Vigre, Håkan, Petersen, Thomas Nordahl, Aarestrup, Frank M
Published in Nature communications (08.03.2019)
Published in Nature communications (08.03.2019)
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Journal Article
Mapping the coverage, availability and uptake of External Quality Assessment programmes across One Health sectors in Asia
Mogeni, Ondari D, Abegaz, Freshwork Ayalew, Kim, Jong-Hoon, Joh, Hea Sun, Kastbjerg, Vicky Gaedt, Pedersen, Susanne Karlsmose, Hendriksen, Rene S, Holm, Marianne
Published in Journal of antimicrobial chemotherapy (01.01.2022)
Published in Journal of antimicrobial chemotherapy (01.01.2022)
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Journal Article
Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System Participants in Identification and Susceptibility Testing of Thermotolerant Campylobacter spp. from 2003 to 2012
Pedersen, Susanne Karlsmose, Wagenaar, Jaap A, Vigre, Håkan, Roer, Louise, Mikoleit, Matthew, Aidara-Kane, Awa, Cawthorne, Amy L, Aarestrup, Frank M, Hendriksen, Rene S
Published in Journal of clinical microbiology (01.11.2018)
Published in Journal of clinical microbiology (01.11.2018)
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Journal Article
Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities
Moran-Gilad, Jacob, Sintchenko, Vitali, Pedersen, Susanne Karlsmose, Wolfgang, William J, Pettengill, James, Strain, Errol, Hendriksen, Rene S
Published in BMC infectious diseases (03.04.2015)
Published in BMC infectious diseases (03.04.2015)
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Journal Article
Results of the 2020 Genomic Proficiency Test for the network of European Union Reference Laboratory for Antimicrobial Resistance assessing whole-genome-sequencing capacities
Kristensen, Thea, Sørensen, Lauge Holm, Pedersen, Susanne Karlsmose, Jensen, Jacob Dyring, Mordhorst, Hanne, Lacy-Roberts, Niamh, Lukjancenko, Oksana, Luo, Yan, Hoffmann, Maria, Hendriksen, Rene S
Published in Microbial genomics (01.08.2023)
Published in Microbial genomics (01.08.2023)
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Journal Article
European Union Reference Laboratories support the National food, feed and veterinary Reference Laboratories with rolling out whole genome sequencing in Europe
Michelacci, Valeria, Asséré, Adrien, Cacciò, Simone, Cavaiuolo, Marina, Mooijman, Kirsten, Morabito, Stefano, Pedersen, Susanne Karlsmose, Sayeb, Maroua, Segerman, Bo, Simonsson, Magnus, Skarin, Hanna, Tozzoli, Rosangela, van Hoek, Angela, Hendriksen, Rene Sjøgren
Published in Microbial genomics (01.07.2023)
Published in Microbial genomics (01.07.2023)
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Journal Article
Whole-genome sequencing for antimicrobial surveillance: species-specific quality thresholds and data evaluation from the network of the European Union Reference Laboratory for Antimicrobial Resistance genomic proficiency tests of 2021 and 2022
Sørensen, Lauge Holm, Pedersen, Susanne Karlsmose, Jensen, Jacob Dyring, Lacy-Roberts, Niamh, Andrea, Athina, S. M. Brouwer, Michael, Veldman, Kees T., Lou, Yan, Hoffmann, Maria, S. Hendriksen, Rene
Published in mSystems (06.08.2024)
Published in mSystems (06.08.2024)
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Journal Article
Occurrence of Listeria spp. in retail meat and dairy products in the area of Addis Ababa, Ethiopia
Derra, Firehiwot Abera, Karlsmose, Susanne, Monga, Dharam P, Mache, Abebe, Svendsen, Christina Aaby, Félix, Benjamin, Granier, Sophie A, Geyid, Abera, Taye, Girum, Hendriksen, Rene S
Published in Foodborne pathogens and disease (01.06.2013)
Published in Foodborne pathogens and disease (01.06.2013)
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Journal Article
Establishing Streptomycin Epidemiological Cut-Off Values for Salmonella and Escherichia coli
Garcia-Migura, Lourdes, Sunde, Marianne, Karlsmose, Susanne, Veldman, Kees, Schroeter, Andreas, Guerra, Beatriz, Granier, Sophie A., Perrin-Guyomard, Agnès, Gicquel-Bruneau, Mireille, Franco, Alessia, Englund, Stina, Teale, Christopher, Heiska, Helmi, Clemente, Lurdes, Boerlin, Patrick, Moreno, Miguel A., Daignault, Danielle, Mevius, Dik, Hendriksen, Rene S., Aarestrup, Frank M.
Published in Microbial drug resistance (Larchmont, N.Y.) (01.02.2012)
Published in Microbial drug resistance (Larchmont, N.Y.) (01.02.2012)
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Journal Article
Final report of ENGAGE ‐ Establishing Next Generation sequencing Ability for Genomic analysis in Europe
Hendriksen, Rene S., Pedersen, Susanne Karlsmose, Leekitcharoenphon, Pimlapas, Malorny, Burkhard, Borowiak, Maria, Battisti, Antonio, Franco, Alessia, Alba, Patricia, Carfora, Virginia, Ricci, Antonia, Mastrorilli, Eleonora, Losasso, Carmen, Longo, Alessandra, Petrin, Sara, Barco, Lisa, Wołkowicz, Tomasz, Gierczyński, Rafał, Zacharczuk, Katarzyna, Wolaniuk, Natalia, Wasyl, Dariusz, Zajac, Magdalena, Wieczorek, Kinga, Pόłtorak, Katarzyna, Petrovska‐Holmes, Liljana, Davies, Rob, Tang, Yue, Grant, Kathie, Underwood, Anthony, Dallman, Timothy, Painset, Anaïs, Hartman, Hassan, Al‐Shabib, Ali, Cowley, Lauren
Published in EFSA supporting publications (01.06.2018)
Published in EFSA supporting publications (01.06.2018)
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Journal Article
Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System participants in the identification and susceptibility testing of thermo-tolerant Campylobacter spp. from 2003-2012
Pedersen, Susanne Karlsmose, Wagenaar, Jaap A, H kan Vigre, Roer, Louise, Mikoleit, Matthew, Cawthorne, Amy L, Aarestrup, Frank M, Hendriksen, Rene S
Published in bioRxiv (30.06.2018)
Published in bioRxiv (30.06.2018)
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