RNA-seq data science: From raw data to effective interpretation
Deshpande, Dhrithi, Chhugani, Karishma, Chang, Yutong, Karlsberg, Aaron, Loeffler, Caitlin, Zhang, Jinyang, Muszyńska, Agata, Munteanu, Viorel, Yang, Harry, Rotman, Jeremy, Tao, Laura, Balliu, Brunilda, Tseng, Elizabeth, Eskin, Eleazar, Zhao, Fangqing, Mohammadi, Pejman, P Łabaj, Paweł, Mangul, Serghei
Published in Frontiers in genetics (13.03.2023)
Published in Frontiers in genetics (13.03.2023)
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Benchmarking of computational error-correction methods for next-generation sequencing data
Mitchell, Keith, Brito, Jaqueline J, Mandric, Igor, Wu, Qiaozhen, Knyazev, Sergey, Chang, Sei, Martin, Lana S, Karlsberg, Aaron, Gerasimov, Ekaterina, Littman, Russell, Hill, Brian L, Wu, Nicholas C, Yang, Harry Taegyun, Hsieh, Kevin, Chen, Linus, Littman, Eli, Shabani, Taylor, Enik, German, Yao, Douglas, Sun, Ren, Schroeder, Jan, Eskin, Eleazar, Zelikovsky, Alex, Skums, Pavel, Pop, Mihai, Mangul, Serghei
Published in Genome Biology (17.03.2020)
Published in Genome Biology (17.03.2020)
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Improving the usability and comprehensiveness of microbial databases
Loeffler, Caitlin, Karlsberg, Aaron, Martin, Lana S, Eskin, Eleazar, Koslicki, David, Mangul, Serghei
Published in BMC biology (07.04.2020)
Published in BMC biology (07.04.2020)
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Correction to: Improving the usability and comprehensiveness of microbial databases
Loeffler, Caitlin, Karlsberg, Aaron, Martin, Lana S, Eskin, Eleazar, Koslicki, David, Mangul, Serghei
Published in BMC biology (28.07.2020)
Published in BMC biology (28.07.2020)
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Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing
Peng, Kerui, Nowicki, Theodore S, Campbell, Katie, Vahed, Mohammad, Peng, Dandan, Meng, Yiting, Nagareddy, Anish, Huang, Yu-Ning, Karlsberg, Aaron, Miller, Zachary, Brito, Jaqueline, Nadel, Brian, Pak, Victoria M, Abedalthagafi, Malak S, Burkhardt, Amanda M, Alachkar, Houda, Ribas, Antoni, Mangul, Serghei
Published in Briefings in bioinformatics (20.07.2023)
Published in Briefings in bioinformatics (20.07.2023)
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Whole Blood Transcriptomics Identifies Subclasses of Pediatric Septic Shock
Yang, Jamie O, Zinter, Matt S, Pellegrini, Matteo, Wong, Man Yee, Gala, Kinisha, Markovic, Daniela, Nadel, Brian, Peng, Kerui, Do, Nguyen, Mangul, Serghei, Nadkarni, Vinay M, Karlsberg, Aaron, Deshpande, Dhrithi, Butte, Manish J, Asaro, Lisa, Agus, Michael, Sapru, Anil
Published in Research square (28.08.2023)
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Published in Research square (28.08.2023)
Journal Article
RNA-seq data science: From raw data to effective interpretation
Deshpande, Dhrithi, Chhugani, Karishma, Chang, Yutong, Karlsberg, Aaron, Loeffler, Caitlin, Zhang, Jinyang, Muszynska, Agata, Rotman, Jeremy, Tao, Laura, Balliu, Brunilda, Tseng, Elizabeth, Eskin, Eleazar, Zhao, Fangqing, Mohammadi, Pejman, Labaj, Pawel P, Serghei Mangul
Published in arXiv.org (16.02.2021)
Published in arXiv.org (16.02.2021)
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Journal Article
Benchmarking of computational error-correction methods for next-generation sequencing data
Mitchell, Keith, Brito, Jaqueline, Mandric, Igor, Wu, Qiaozhen, Knyazev, Sergey, Chang, Sei, Martin, Lana S, Karlsberg, Aaron, Gerasimov, Ekaterina, Littman, Russell, Hill, Brian L, Wu, Nicholas C, Yang, Harry, Hsieh, Kevin, Chen, Linus, Littman, Eli, Taylor Shabani, Shabanets, German, Yao, Douglas, Sun, Ren, Schroeder, Jan, Eskin, Eleazar, Zelikovsky, Alex, Skums, Pavel, Pop, Mihai, Serghei Mangul
Published in bioRxiv (06.03.2020)
Published in bioRxiv (06.03.2020)
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