The Oral Microbiome of Children: Development, Disease, and Implications Beyond Oral Health
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Book Review
Enteric dysbiosis associated with a mouse model of alcoholic liver disease
Yan, Arthur W., E. Fouts, Derrick, Brandl, Johannes, Stärkel, Peter, Torralba, Manolito, Schott, Eckart, Tsukamoto, Hide, E. Nelson, Karen, A. Brenner, David, Schnabl, Bernd
Published in Hepatology (Baltimore, Md.) (01.01.2011)
Published in Hepatology (Baltimore, Md.) (01.01.2011)
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Interplay between the human gut microbiome and host metabolism
Visconti, Alessia, Le Roy, Caroline I., Rosa, Fabio, Rossi, Niccolò, Martin, Tiphaine C., Mohney, Robert P., Li, Weizhong, de Rinaldis, Emanuele, Bell, Jordana T., Venter, J. Craig, Nelson, Karen E., Spector, Tim D., Falchi, Mario
Published in Nature communications (03.10.2019)
Published in Nature communications (03.10.2019)
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The Threat of Antimicrobial Resistance on the Human Microbiome
Brinkac, Lauren, Voorhies, Alexander, Gomez, Andres, Nelson, Karen E.
Published in Microbial ecology (01.11.2017)
Published in Microbial ecology (01.11.2017)
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A new antibiotic selectively kills Gram-negative pathogens
Imai, Yu, Meyer, Kirsten J., Iinishi, Akira, Favre-Godal, Quentin, Green, Robert, Manuse, Sylvie, Caboni, Mariaelena, Mori, Miho, Niles, Samantha, Ghiglieri, Meghan, Honrao, Chandrashekhar, Ma, Xiaoyu, Guo, Jason J., Makriyannis, Alexandros, Linares-Otoya, Luis, Böhringer, Nils, Wuisan, Zerlina G., Kaur, Hundeep, Wu, Runrun, Mateus, André, Typas, Athanasios, Savitski, Mikhail M., Espinoza, Josh L., O’Rourke, Aubrie, Nelson, Karen E., Hiller, Sebastian, Noinaj, Nicholas, Schäberle, Till F., D’Onofrio, Anthony, Lewis, Kim
Published in Nature (London) (01.12.2019)
Published in Nature (London) (01.12.2019)
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Journal Article
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
Loomba, Rohit, Seguritan, Victor, Li, Weizhong, Long, Tao, Klitgord, Niels, Bhatt, Archana, Dulai, Parambir Singh, Caussy, Cyrielle, Bettencourt, Richele, Highlander, Sarah K., Jones, Marcus B., Sirlin, Claude B., Schnabl, Bernd, Brinkac, Lauren, Schork, Nicholas, Chen, Chi-Hua, Brenner, David A., Biggs, William, Yooseph, Shibu, Venter, J. Craig, Nelson, Karen E.
Published in Cell metabolism (02.05.2017)
Published in Cell metabolism (02.05.2017)
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Journal Article
The blood DNA virome in 8,000 humans
Moustafa, Ahmed, Xie, Chao, Kirkness, Ewen, Biggs, William, Wong, Emily, Turpaz, Yaron, Bloom, Kenneth, Delwart, Eric, Nelson, Karen E, Venter, J Craig, Telenti, Amalio
Published in PLoS pathogens (01.03.2017)
Published in PLoS pathogens (01.03.2017)
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Journal Article
Heritability of Hepatic Fibrosis and Steatosis Based on a Prospective Twin Study
Loomba, Rohit, Schork, Nicholas, Chen, Chi-Hua, Bettencourt, Ricki, Bhatt, Ana, Ang, Brandon, Nguyen, Phirum, Hernandez, Carolyn, Richards, Lisa, Salotti, Joanie, Lin, Steven, Seki, Ekihiro, Nelson, Karen E, Sirlin, Claude B, Brenner, David
Published in Gastroenterology (New York, N.Y. 1943) (01.12.2015)
Published in Gastroenterology (New York, N.Y. 1943) (01.12.2015)
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Journal Article
The Human Microbiome Project: a community resource for the healthy human microbiome
Gevers, Dirk, Knight, Rob, Petrosino, Joseph F, Huang, Katherine, McGuire, Amy L, Birren, Bruce W, Nelson, Karen E, White, Owen, Methé, Barbara A, Huttenhower, Curtis
Published in PLoS biology (01.08.2012)
Published in PLoS biology (01.08.2012)
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Journal Article
Next generation sequencing to define prokaryotic and fungal diversity in the bovine rumen
Fouts, Derrick E, Szpakowski, Sebastian, Purushe, Janaki, Torralba, Manolito, Waterman, Richard C, MacNeil, Michael D, Alexander, Leeson J, Nelson, Karen E
Published in PloS one (07.11.2012)
Published in PloS one (07.11.2012)
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Journal Article
Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle
He, Xuesong, McLean, Jeffrey S., Edlund, Anna, Yooseph, Shibu, Hall, Adam P., Liu, Su-Yang, Dorrestein, Pieter C., Esquenazi, Eduardo, Hunter, Ryan C., Cheng, Genhong, Nelson, Karen E., Lux, Renate, Shi, Wenyuan
Published in Proceedings of the National Academy of Sciences - PNAS (06.01.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (06.01.2015)
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Journal Article
Vertical Transmission of Gut Microbiome and Antimicrobial Resistance Genes in Infants Exposed to Antibiotics at Birth
Li, Weizhong, Tapiainen, Terhi, Brinkac, Lauren, Lorenzi, Hernan A, Moncera, Kelvin, Tejesvi, Mysore V, Salo, Jarmo, Nelson, Karen E
Published in The Journal of infectious diseases (13.10.2021)
Published in The Journal of infectious diseases (13.10.2021)
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Journal Article
The Human Microbiome and Cancer
Rajagopala, Seesandra V, Vashee, Sanjay, Oldfield, Lauren M, Suzuki, Yo, Venter, J Craig, Telenti, Amalio, Nelson, Karen E
Published in Cancer prevention research (Philadelphia, Pa.) (01.04.2017)
Published in Cancer prevention research (Philadelphia, Pa.) (01.04.2017)
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Journal Article
Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes
Amato, Katherine R, Yeoman, Carl J, Kent, Angela, Righini, Nicoletta, Carbonero, Franck, Estrada, Alejandro, Rex Gaskins, H, Stumpf, Rebecca M, Yildirim, Suleyman, Torralba, Manolito, Gillis, Marcus, Wilson, Brenda A, Nelson, Karen E, White, Bryan A, Leigh, Steven R
Published in The ISME Journal (01.07.2013)
Published in The ISME Journal (01.07.2013)
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Journal Article
Supplementation of Saturated Long-Chain Fatty Acids Maintains Intestinal Eubiosis and Reduces Ethanol-induced Liver Injury in Mice
Chen, Peng, Torralba, Manolito, Tan, Justin, Embree, Mallory, Zengler, Karsten, Stärkel, Peter, van Pijkeren, Jan-Peter, DePew, Jessica, Loomba, Rohit, Ho, Samuel B, Bajaj, Jasmohan S, Mutlu, Ece A, Keshavarzian, Ali, Tsukamoto, Hidekazu, Nelson, Karen E, Fouts, Derrick E, Schnabl, Bernd
Published in Gastroenterology (New York, N.Y. 1943) (01.01.2015)
Published in Gastroenterology (New York, N.Y. 1943) (01.01.2015)
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Journal Article
Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes
Amato, Katherine R., G. Sanders, Jon, Song, Se Jin, Nute, Michael, Metcalf, Jessica L., Thompson, Luke R., Morton, James T., Amir, Amnon, J. McKenzie, Valerie, Humphrey, Gregory, Gogul, Grant, Gaffney, James, L. Baden, Andrea, A.O. Britton, Gillian, P. Cuozzo, Frank, Di Fiore, Anthony, J. Dominy, Nathaniel, L. Goldberg, Tony, Gomez, Andres, Kowalewski, Martin M., J. Lewis, Rebecca, Link, Andres, L. Sauther, Michelle, Tecot, Stacey, A. White, Bryan, E. Nelson, Karen, M. Stumpf, Rebecca, Knight, Rob, R. Leigh, Steven
Published in The ISME Journal (01.03.2019)
Published in The ISME Journal (01.03.2019)
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Journal Article
Host Genetic Control of the Oral Microbiome in Health and Disease
Gomez, Andres, Espinoza, Josh L., Harkins, Derek M., Leong, Pamela, Saffery, Richard, Bockmann, Michelle, Torralba, Manolito, Kuelbs, Claire, Kodukula, Rohith, Inman, Jason, Hughes, Toby, Craig, Jeffrey M., Highlander, Sarah K., Jones, Marcus B., Dupont, Chris L., Nelson, Karen E.
Published in Cell host & microbe (13.09.2017)
Published in Cell host & microbe (13.09.2017)
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Journal Article
Gastric acid suppression promotes alcoholic liver disease by inducing overgrowth of intestinal Enterococcus
Llorente, Cristina, Jepsen, Peter, Inamine, Tatsuo, Wang, Lirui, Bluemel, Sena, Wang, Hui J., Loomba, Rohit, Bajaj, Jasmohan S., Schubert, Mitchell L., Sikaroodi, Masoumeh, Gillevet, Patrick M., Xu, Jun, Kisseleva, Tatiana, Ho, Samuel B., DePew, Jessica, Du, Xin, Sørensen, Henrik T., Vilstrup, Hendrik, Nelson, Karen E., Brenner, David A., Fouts, Derrick E., Schnabl, Bernd
Published in Nature communications (16.10.2017)
Published in Nature communications (16.10.2017)
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Journal Article
Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns
Gomez, Andres, Petrzelkova, Klara J., Burns, Michael B., Yeoman, Carl J., Amato, Katherine R., Vlckova, Klara, Modry, David, Todd, Angelique, Jost Robinson, Carolyn A., Remis, Melissa J., Torralba, Manolito G., Morton, Elise, Umaña, Juan D., Carbonero, Franck, Gaskins, H. Rex, Nelson, Karen E., Wilson, Brenda A., Stumpf, Rebecca M., White, Bryan A., Leigh, Steven R., Blekhman, Ran
Published in Cell reports (Cambridge) (08.03.2016)
Published in Cell reports (Cambridge) (08.03.2016)
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