Dissection of artifactual and confounding glial signatures by single-cell sequencing of mouse and human brain
Marsh, Samuel E., Walker, Alec J., Kamath, Tushar, Dissing-Olesen, Lasse, Hammond, Timothy R., de Soysa, T. Yvanka, Young, Adam M. H., Murphy, Sarah, Abdulraouf, Abdulraouf, Nadaf, Naeem, Dufort, Connor, Walker, Alicia C., Lucca, Liliana E., Kozareva, Velina, Vanderburg, Charles, Hong, Soyon, Bulstrode, Harry, Hutchinson, Peter J., Gaffney, Daniel J., Hafler, David A., Franklin, Robin J. M., Macosko, Evan Z., Stevens, Beth
Published in Nature neuroscience (01.03.2022)
Published in Nature neuroscience (01.03.2022)
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Journal Article
Control of osteocyte dendrite formation by Sp7 and its target gene osteocrin
Wang, Jialiang S., Kamath, Tushar, Mazur, Courtney M., Mirzamohammadi, Fatemeh, Rotter, Daniel, Hojo, Hironori, Castro, Christian D., Tokavanich, Nicha, Patel, Rushi, Govea, Nicolas, Enishi, Tetsuya, Wu, Yunshu, da Silva Martins, Janaina, Bruce, Michael, Brooks, Daniel J., Bouxsein, Mary L., Tokarz, Danielle, Lin, Charles P., Abdul, Abdul, Macosko, Evan Z., Fiscaletti, Melissa, Munns, Craig F., Ryder, Pearl, Kost-Alimova, Maria, Byrne, Patrick, Cimini, Beth, Fujiwara, Makoto, Kronenberg, Henry M., Wein, Marc N.
Published in Nature communications (01.11.2021)
Published in Nature communications (01.11.2021)
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Structural Alterations Driving Castration-Resistant Prostate Cancer Revealed by Linked-Read Genome Sequencing
Viswanathan, Srinivas R., Ha, Gavin, Hoff, Andreas M., Wala, Jeremiah A., Carrot-Zhang, Jian, Whelan, Christopher W., Haradhvala, Nicholas J., Freeman, Samuel S., Reed, Sarah C., Rhoades, Justin, Polak, Paz, Cipicchio, Michelle, Wankowicz, Stephanie A., Wong, Alicia, Kamath, Tushar, Zhang, Zhenwei, Gydush, Gregory J., Rotem, Denisse, Love, J. Christopher, Getz, Gad, Gabriel, Stacey, Zhang, Cheng-Zhong, Dehm, Scott M., Nelson, Peter S., Van Allen, Eliezer M., Choudhury, Atish D., Adalsteinsson, Viktor A., Beroukhim, Rameen, Taplin, Mary-Ellen, Meyerson, Matthew
Published in Cell (12.07.2018)
Published in Cell (12.07.2018)
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Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease
Kamath, Tushar, Abdulraouf, Abdulraouf, Burris, S. J., Langlieb, Jonah, Gazestani, Vahid, Nadaf, Naeem M., Balderrama, Karol, Vanderburg, Charles, Macosko, Evan Z.
Published in Nature neuroscience (01.05.2022)
Published in Nature neuroscience (01.05.2022)
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Molecular and cellular responses to amyloid beta revealed from single cell analysis of surgical brain biopsies
Kamath, Tushar, Gazestani, Vahid, Dolan, Michael John, Nadaf, Naeem, Vanderburg, Charles, Leinonen, Ville, Macosko, Evan
Published in Alzheimer's & dementia (01.12.2022)
Published in Alzheimer's & dementia (01.12.2022)
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Early Alzheimer’s disease pathology in human cortex involves transient cell states
Gazestani, Vahid, Kamath, Tushar, Nadaf, Naeem M., Dougalis, Antonios, Burris, S.J., Rooney, Brendan, Junkkari, Antti, Vanderburg, Charles, Pelkonen, Anssi, Gomez-Budia, Mireia, Välimäki, Nelli-Noora, Rauramaa, Tuomas, Therrien, Martine, Koivisto, Anne M., Tegtmeyer, Matthew, Herukka, Sanna-Kaisa, Abdulraouf, Abdulraouf, Marsh, Samuel E., Hiltunen, Mikko, Nehme, Ralda, Malm, Tarja, Stevens, Beth, Leinonen, Ville, Macosko, Evan Z.
Published in Cell (28.09.2023)
Published in Cell (28.09.2023)
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Exposure of iPSC-derived human microglia to brain substrates enables the generation and manipulation of diverse transcriptional states in vitro
Dolan, Michael-John, Therrien, Martine, Jereb, Saša, Kamath, Tushar, Gazestani, Vahid, Atkeson, Trevor, Marsh, Samuel E., Goeva, Aleksandrina, Lojek, Neal M., Murphy, Sarah, White, Cassandra M., Joung, Julia, Liu, Bingxu, Limone, Francesco, Eggan, Kevin, Hacohen, Nir, Bernstein, Bradley E., Glass, Christopher K., Leinonen, Ville, Blurton-Jones, Mathew, Zhang, Feng, Epstein, Charles B., Macosko, Evan Z., Stevens, Beth
Published in Nature immunology (01.08.2023)
Published in Nature immunology (01.08.2023)
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A toolkit to study microglia states using stem cell‐derived models
Therrien, Martine, Dolan, Michael John, Jereb, Sasa, Kamath, Tushar, Meyer, Daniel, Atkeson, Trevor, Glass, Christopher K., Leinonen, Ville, Blurton‐Jones, Mathew, Macosko, Evan, Stevens, Beth
Published in Alzheimer's & dementia (01.12.2023)
Published in Alzheimer's & dementia (01.12.2023)
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Journal Article
Multi‐modal Analysis and Modeling of Human Neurodegenerative Disease to Reveal Disease Mechanisms and Biomarkers
Marsh, Samuel E, Murphy, Sarah, Kamath, Tushar, Gazestani, Vahid, Therrien, Martine, Dolan, Michael John, Jereb, Sasa, Reyes, Miguel, Gobom, Johan, Clish, Clary, Hacohen, Nir, Zetterberg, Henrik, Leinonen, Ville, Macosko, Evan, Stevens, Beth
Published in Alzheimer's & dementia (01.12.2022)
Published in Alzheimer's & dementia (01.12.2022)
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Journal Article
A Size-Selective Intracellular Delivery Platform
Saung, May Tun, Sharei, Armon, Adalsteinsson, Viktor A., Cho, Nahyun, Kamath, Tushar, Ruiz, Camilo, Kirkpatrick, Jesse, Patel, Nehal, Mino-Kenudson, Mari, Thayer, Sarah P., Langer, Robert, Jensen, Klavs F., Liss, Andrew S., Love, J. Christopher
Published in Small (Weinheim an der Bergstrasse, Germany) (01.11.2016)
Published in Small (Weinheim an der Bergstrasse, Germany) (01.11.2016)
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Abstract 5538A: Cell size-specific intracellular delivery
Saung, May Tun, Sharei, Armon, Adalsteinsson, Viktor, Liss, Andrew, Cho, Nahyun, Kamath, Tushar, Ruiz, Camilo, Kirkpatrick, Jesse, Langer, Robert, Love, Christopher, Jensen, Klavs
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions
Maury, Eduardo A, Sherman, Maxwell A, Genovese, Giulio, Gilgenast, Thomas G, Kamath, Tushar, Burris, S J, Rajarajan, Prashanth, Flaherty, Erin, Akbarian, Schahram, Chess, Andrew, McCarroll, Steven A, Loh, Po-Ru, Phillips-Cremins, Jennifer E, Brennand, Kristen J, Macosko, Evan Z, Walters, James T R, O'Donovan, Michael, Sullivan, Patrick, Sebat, Jonathan, Lee, Eunjung A, Walsh, Christopher A
Published in Cell genomics (09.08.2023)
Published in Cell genomics (09.08.2023)
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Mutator/Hypermutable fetal/juvenile metakaryotic stem cells and human colorectal carcinogenesis
Kini, Lohith G, Herrero-Jimenez, Pablo, Kamath, Tushar, Sanghvi, Jayodita, Gutierrez, Jr, Efren, Hensle, David, Kogel, John, Kusko, Rebecca, Rexer, Karl, Kurzweil, Ray, Refinetti, Paulo, Morgenthaler, Stephan, Koledova, Vera V, Gostjeva, Elena V, Thilly, William G
Published in Frontiers in oncology (29.10.2013)
Published in Frontiers in oncology (29.10.2013)
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Journal Article
Early Alzheimer's disease pathology in human cortex is associated with a transient phase of distinct cell states
Gazestani, Vahid, Kamath, Tushar, Nadaf, Naeem M, Burris, S J, Rooney, Brendan, Junkkari, Antti, Vanderburg, Charles, Rauramaa, Tuomas, Therrien, Martine, Tegtmeyer, Matthew, Herukka, Sanna-Kaisa, Abdulraouf, Abdulraouf, Marsh, Samuel, Malm, Tarja, Hiltunen, Mikko, Nehme, Ralda, Stevens, Beth, Leinonen, Ville, Macosko, Evan Z
Published in bioRxiv (05.06.2023)
Published in bioRxiv (05.06.2023)
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Journal Article
Control of osteocyte dendrite formation by Sp7 and its target gene osteocrin
Wang, Jialiang S, Kamath, Tushar, Mirzamohammadi, Fatemeh, Rotter, Daniel, Hojo, Hironori, Castro, Christian D, Patel, Rushi, Govea, Nicolas, Enishi, Tetsuya, Wu, Yunshu, Janaina Da Silva Martins, Bruce, Michael, Brooks, Daniel J, Bouxsein, Mary L, Tokarz, Danielle, Lin, Charles P, Abdul, Abdul, Macosko, Evan Z, Fiscaletti, Melissa, Munns, Craig F, Fujiwara, Makoto, Kronenberg, Henry M, Wein, Marc N
Published in bioRxiv (22.03.2021)
Published in bioRxiv (22.03.2021)
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Paper
Single Cell Sequencing Reveals Glial Specific Responses to Tissue Processing & Enzymatic Dissociation in Mice and Humans
Marsh, Samuel E, Kamath, Tushar, Walker, Alec J, Dissing-Olesen, Lasse, Hammond, Timothy R, Young, Adam Mh, Abdulraouf, Abdulraouf, Nadaf, Naeem, Connor Dufort, Murphy, Sarah, Kozareva, Velina, Vanderburg, Charles, Hong, Soyon, Bulstrode, Harry, Hutchinson, Peter J, Gaffney, Daniel J, Franklin, Robin Jm, Macosko, Evan Z, Stevens, Beth
Published in bioRxiv (03.12.2020)
Published in bioRxiv (03.12.2020)
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