Maptcha: an efficient parallel workflow for hybrid genome scaffolding
Bhowmik, Oieswarya, Rahman, Tazin, Kalyanaraman, Ananth
Published in BMC bioinformatics (08.08.2024)
Published in BMC bioinformatics (08.08.2024)
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Journal Article
Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing
Abnousi, Armen, Broschat, Shira L, Kalyanaraman, Ananth
Published in BMC bioinformatics (05.03.2018)
Published in BMC bioinformatics (05.03.2018)
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Journal Article
CisSERS: Customizable In Silico Sequence Evaluation for Restriction Sites
Sharpe, Richard M, Koepke, Tyson, Harper, Artemus, Grimes, John, Galli, Marco, Satoh-Cruz, Mio, Kalyanaraman, Ananth, Evans, Katherine, Kramer, David, Dhingra, Amit
Published in PloS one (12.04.2016)
Published in PloS one (12.04.2016)
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Journal Article
Attenuation of virulence in an apicomplexan hemoparasite results in reduced genome diversity at the population level
Lau, Audrey Ot, Kalyanaraman, Ananth, Echaide, Ignacio, Palmer, Guy H, Bock, Russell, Pedroni, Monica J, Rameshkumar, Meenakshi, Ferreira, Mariano B, Fletcher, Taryn I, McElwain, Terry F
Published in BMC genomics (12.08.2011)
Published in BMC genomics (12.08.2011)
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Journal Article
FastEtch: A Fast Sketch-Based Assembler for Genomes
Ghosh, Priyanka, Kalyanaraman, Ananth
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2019)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2019)
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Journal Article
Towards scaling community detection on distributed-memory heterogeneous systems
Gawande, Nitin, Ghosh, Sayan, Halappanavar, Mahantesh, Tumeo, Antonino, Kalyanaraman, Ananth
Published in Parallel computing (01.07.2022)
Published in Parallel computing (01.07.2022)
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Journal Article
Message from the Program Chairs
Published in 2019 IEEE 26th International Conference on High Performance Computing, Data, and Analytics (HiPC)
(01.12.2019)
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Conference Proceeding