RNA3DB: A structurally-dissimilar dataset split for training and benchmarking deep learning models for RNA structure prediction
Szikszai, Marcell, Magnus, Marcin, Sanghi, Siddhant, Kadyan, Sachin, Bouatta, Nazim, Rivas, Elena
Published in Journal of molecular biology (01.09.2024)
Published in Journal of molecular biology (01.09.2024)
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Journal Article
OpenFold: retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
Ahdritz, Gustaf, Bouatta, Nazim, Floristean, Christina, Kadyan, Sachin, Xia, Qinghui, Gerecke, William, O'Donnell, Timothy J, Berenberg, Daniel, Fisk, Ian, Zanichelli, Niccolò, Zhang, Bo, Nowaczynski, Arkadiusz, Wang, Bei, Stepniewska-Dziubinska, Marta M, Zhang, Shang, Ojewole, Adegoke, Guney, Murat Efe, Biderman, Stella, Watkins, Andrew M, Ra, Stephen, Lorenzo, Pablo Ribalta, Nivon, Lucas, Weitzner, Brian, Ban, Yih-En Andrew, Chen, Shiyang, Zhang, Minjia, Li, Conglong, Song, Shuaiwen Leon, He, Yuxiong, Sorger, Peter K, Mostaque, Emad, Zhang, Zhao, Bonneau, Richard, AlQuraishi, Mohammed
Published in Nature methods (01.08.2024)
Published in Nature methods (01.08.2024)
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Journal Article
Online Career Guidance and Counseling - Picxida
Sucharitha, Ratakonda, Duhan, Ankit, Singh, Harmeet, Singh, Jeevan, Kadyan, Sachin, Kaur, Manjit
Published in 2021 9th International Conference on Reliability, Infocom Technologies and Optimization (Trends and Future Directions) (ICRITO) (03.09.2021)
Published in 2021 9th International Conference on Reliability, Infocom Technologies and Optimization (Trends and Future Directions) (ICRITO) (03.09.2021)
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Conference Proceeding
OpenProteinSet: Training data for structural biology at scale
Ahdritz, Gustaf, Bouatta, Nazim, Kadyan, Sachin, Jarosch, Lukas, Berenberg, Daniel, Fisk, Ian, Watkins, Andrew M, Ra, Stephen, Bonneau, Richard, AlQuraishi, Mohammed
Year of Publication 10.08.2023
Year of Publication 10.08.2023
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Journal Article
OpenProteinSet: Training data for structural biology at scale
Ahdritz, Gustaf, Bouatta, Nazim, Kadyan, Sachin, Jarosch, Lukas, Berenberg, Daniel, Fisk, Ian, Watkins, Andrew M, Ra, Stephen, Bonneau, Richard, AlQuraishi, Mohammed
Published in ArXiv.org (10.08.2023)
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Published in ArXiv.org (10.08.2023)
Journal Article
OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
Ahdritz, Gustaf, Bouatta, Nazim, Kadyan, Sachin, Xia, Qinghui, Gerecke, William, O'donnell, Timothy J, Berenberg, Daniel, Fisk, Ian, Zanichelli, Niccola, Zhang, Bo, Nowaczynski, Arkadiusz, Wang, Bei, Stepniewska-Dziubinska, Marta M, Zhang, Shang, Adegoke Ojewole, Murat Efe Guney, Biderman, Stella, Watkins, Andrew M, Ra, Stephen, Lorenzo, Pablo Ribalta, Lucas Nivon, Weitzner, Brian, Ban, Yih-En Andrew, Sorger, Peter K, Mostaque, Emad, Zhang, Zhao, Bonneau, Richard, Alquraishi, Mohammed
Published in bioRxiv (22.11.2022)
Published in bioRxiv (22.11.2022)
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