Natural selection and infectious disease in human populations
Karlsson, Elinor K, Kwiatkowski, Dominic P, Sabeti, Pardis C
Published in Nature reviews. Genetics (01.06.2014)
Published in Nature reviews. Genetics (01.06.2014)
Get full text
Journal Article
Genetic markers associated with dihydroartemisinin–piperaquine failure in Plasmodium falciparum malaria in Cambodia: a genotype–phenotype association study
Amato, Roberto, Dr, Lim, Pharath, MD, Miotto, Olivo, PhD, Amaratunga, Chanaki, PhD, Dek, Dalin, MSc, Pearson, Richard D, PhD, Almagro-Garcia, Jacob, MSc, Neal, Aaron T, PhD, Sreng, Sokunthea, Suon, Seila, MD, Drury, Eleanor, BSc[Hons], Jyothi, Dushyanth, MPhil, Stalker, Jim, MA, Kwiatkowski, Dominic P, FRCP, Fairhurst, Rick M, Dr
Published in The Lancet infectious diseases (01.02.2017)
Published in The Lancet infectious diseases (01.02.2017)
Get full text
Journal Article
Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea
Miotto, Olivo, Sekihara, Makoto, Tachibana, Shin-Ichiro, Yamauchi, Masato, Pearson, Richard D, Amato, Roberto, Gonçalves, Sonia, Mehra, Somya, Noviyanti, Rintis, Marfurt, Jutta, Auburn, Sarah, Price, Ric N, Mueller, Ivo, Ikeda, Mie, Mori, Toshiyuki, Hirai, Makoto, Tavul, Livingstone, Hetzel, Manuel W, Laman, Moses, Barry, Alyssa E, Ringwald, Pascal, Ohashi, Jun, Hombhanje, Francis, Kwiatkowski, Dominic P, Mita, Toshihiro
Published in PLoS pathogens (15.12.2020)
Published in PLoS pathogens (15.12.2020)
Get full text
Journal Article
Origins of the current outbreak of multidrug-resistant malaria in southeast Asia: a retrospective genetic study
Amato, Roberto, Pearson, Richard D, Almagro-Garcia, Jacob, Amaratunga, Chanaki, Lim, Pharath, Suon, Seila, Sreng, Sokunthea, Drury, Eleanor, Stalker, Jim, Miotto, Olivo, Fairhurst, Rick M, Kwiatkowski, Dominic P
Published in The Lancet infectious diseases (01.03.2018)
Published in The Lancet infectious diseases (01.03.2018)
Get full text
Journal Article
Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes
Oyola, Samuel O, Otto, Thomas D, Gu, Yong, Maslen, Gareth, Manske, Magnus, Campino, Susana, Turner, Daniel J, Macinnis, Bronwyn, Kwiatkowski, Dominic P, Swerdlow, Harold P, Quail, Michael A
Published in BMC genomics (03.01.2012)
Published in BMC genomics (03.01.2012)
Get full text
Journal Article
Whole-genome sequencing reveals high complexity of copy number variation at insecticide resistance loci in malaria mosquitoes
Lucas, Eric R, Miles, Alistair, Harding, Nicholas J, Clarkson, Chris S, Lawniczak, Mara K N, Kwiatkowski, Dominic P, Weetman, David, Donnelly, Martin J
Published in Genome research (01.08.2019)
Published in Genome research (01.08.2019)
Get full text
Journal Article
Culture adaptation of malaria parasites selects for convergent loss-of-function mutants
Claessens, Antoine, Affara, Muna, Assefa, Samuel A, Kwiatkowski, Dominic P, Conway, David J
Published in Scientific reports (24.01.2017)
Published in Scientific reports (24.01.2017)
Get full text
Journal Article
A transcriptional switch underlies commitment to sexual development in malaria parasites
Kafsack, Björn F C, Rovira-Graells, Núria, Clark, Taane G, Bancells, Cristina, Crowley, Valerie M, Campino, Susana G, Williams, April E, Drought, Laura G, Kwiatkowski, Dominic P, Baker, David A, Cortés, Alfred, Llinás, Manuel
Published in Nature (London) (13.03.2014)
Published in Nature (London) (13.03.2014)
Get full text
Journal Article
Basigin is a receptor essential for erythrocyte invasion by Plasmodium falciparum
Crosnier, Cécile, Bustamante, Leyla Y, Bartholdson, S Josefin, Bei, Amy K, Theron, Michel, Uchikawa, Makoto, Mboup, Souleymane, Ndir, Omar, Kwiatkowski, Dominic P, Duraisingh, Manoj T, Rayner, Julian C, Wright, Gavin J
Published in Nature (London) (22.12.2011)
Published in Nature (London) (22.12.2011)
Get full text
Journal Article
THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites
Chang, Hsiao-Han, Worby, Colin J, Yeka, Adoke, Nankabirwa, Joaniter, Kamya, Moses R, Staedke, Sarah G, Dorsey, Grant, Murphy, Maxwell, Neafsey, Daniel E, Jeffreys, Anna E, Hubbart, Christina, Rockett, Kirk A, Amato, Roberto, Kwiatkowski, Dominic P, Buckee, Caroline O, Greenhouse, Bryan
Published in PLoS computational biology (01.01.2017)
Published in PLoS computational biology (01.01.2017)
Get full text
Journal Article
Methodological challenges of genome-wide association analysis in Africa
Kwiatkowski, Dominic P, Teo, Yik-Ying, Small, Kerrin S
Published in Nature reviews. Genetics (01.02.2010)
Published in Nature reviews. Genetics (01.02.2010)
Get full text
Journal Article
Plasmodium malariae and P. ovale genomes provide insights into malaria parasite evolution
Rutledge, Gavin G, Böhme, Ulrike, Sanders, Mandy, Reid, Adam J, Cotton, James A, Maiga-Ascofare, Oumou, Djimdé, Abdoulaye A, Apinjoh, Tobias O, Amenga-Etego, Lucas, Manske, Magnus, Barnwell, John W, Renaud, François, Ollomo, Benjamin, Prugnolle, Franck, Anstey, Nicholas M, Auburn, Sarah, Price, Ric N, McCarthy, James S, Kwiatkowski, Dominic P, Newbold, Chris I, Berriman, Matthew, Otto, Thomas D
Published in Nature (London) (02.02.2017)
Published in Nature (London) (02.02.2017)
Get full text
Journal Article
Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics
Auburn, Sarah, Benavente, Ernest D, Miotto, Olivo, Pearson, Richard D, Amato, Roberto, Grigg, Matthew J, Barber, Bridget E, William, Timothy, Handayuni, Irene, Marfurt, Jutta, Trimarsanto, Hidayat, Noviyanti, Rintis, Sriprawat, Kanlaya, Nosten, Francois, Campino, Susana, Clark, Taane G, Anstey, Nicholas M, Kwiatkowski, Dominic P, Price, Ric N
Published in Nature communications (03.07.2018)
Published in Nature communications (03.07.2018)
Get full text
Journal Article
Generation of antigenic diversity in Plasmodium falciparum by structured rearrangement of Var genes during mitosis
Claessens, Antoine, Hamilton, William L, Kekre, Mihir, Otto, Thomas D, Faizullabhoy, Adnan, Rayner, Julian C, Kwiatkowski, Dominic
Published in PLoS genetics (01.12.2014)
Published in PLoS genetics (01.12.2014)
Get full text
Journal Article
Red blood cell tension protects against severe malaria in the Dantu blood group
Kariuki, Silvia N, Marin-Menendez, Alejandro, Introini, Viola, Ravenhill, Benjamin J, Lin, Yen-Chun, Macharia, Alex, Makale, Johnstone, Tendwa, Metrine, Nyamu, Wilfred, Kotar, Jurij, Carrasquilla, Manuela, Rowe, J Alexandra, Rockett, Kirk, Kwiatkowski, Dominic, Weekes, Michael P, Cicuta, Pietro, Williams, Thomas N, Rayner, Julian C
Published in Nature (London) (24.09.2020)
Published in Nature (London) (24.09.2020)
Get full text
Journal Article
Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites
Amambua-Ngwa, Alfred, Tetteh, Kevin K A, Manske, Magnus, Gomez-Escobar, Natalia, Stewart, Lindsay B, Deerhake, M Elizabeth, Cheeseman, Ian H, Newbold, Christopher I, Holder, Anthony A, Knuepfer, Ellen, Janha, Omar, Jallow, Muminatou, Campino, Susana, Macinnis, Bronwyn, Kwiatkowski, Dominic P, Conway, David J
Published in PLoS genetics (01.11.2012)
Published in PLoS genetics (01.11.2012)
Get full text
Journal Article
Characterization of within-host Plasmodium falciparum diversity using next-generation sequence data
Auburn, Sarah, Campino, Susana, Miotto, Olivo, Djimde, Abdoulaye A, Zongo, Issaka, Manske, Magnus, Maslen, Gareth, Mangano, Valentina, Alcock, Daniel, MacInnis, Bronwyn, Rockett, Kirk A, Clark, Taane G, Doumbo, Ogobara K, Ouédraogo, Jean Bosco, Kwiatkowski, Dominic P
Published in PloS one (29.02.2012)
Published in PloS one (29.02.2012)
Get full text
Journal Article