Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants
Crits-Christoph, Alexander, Kantor, Rose S, Olm, Matthew R, Whitney, Oscar N, Al-Shayeb, Basem, Lou, Yue Clare, Flamholz, Avi, Kennedy, Lauren C, Greenwald, Hannah, Hinkle, Adrian, Hetzel, Jonathan, Spitzer, Sara, Koble, Jeffery, Tan, Asako, Hyde, Fred, Schroth, Gary, Kuersten, Scott, Banfield, Jillian F, Nelson, Kara L
Published in mBio (19.01.2021)
Published in mBio (19.01.2021)
Get full text
Journal Article
Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data
Spealman, Pieter, Naik, Armaghan, May, Gemma, Kuersten, Scott, Freebert, Lindsay, Murphy, Robert, McManus, Joel
Published in Genome research (01.02.2018)
Published in Genome research (01.02.2018)
Get full text
Journal Article
Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes
Tan, Asako, Murugapiran, Senthil, Mikalauskas, Alaya, Koble, Jeff, Kennedy, Drew, Hyde, Fred, Ruotti, Victor, Law, Emily, Jensen, Jordan, Schroth, Gary P, Macklaim, Jean M, Kuersten, Scott, LeFrançois, Brice, Gohl, Daryl M
Published in BMC microbiology (20.10.2023)
Published in BMC microbiology (20.10.2023)
Get full text
Journal Article
Multi-modal regulation of C. elegans hermaphrodite spermatogenesis by the GLD-1-FOG-2 complex
Hu, Shuang, Skelly, Lauren E., Kaymak, Ebru, Freeberg, Lindsay, Lo, Te-Wen, Kuersten, Scott, Ryder, Sean P., Haag, Eric S.
Published in Developmental biology (15.02.2019)
Published in Developmental biology (15.02.2019)
Get full text
Journal Article
Transposase mediated construction of RNA-seq libraries
Gertz, Jason, Varley, Katherine E, Davis, Nicholas S, Baas, Bradley J, Goryshin, Igor Y, Vaidyanathan, Ramesh, Kuersten, Scott, Myers, Richard M
Published in Genome research (01.01.2012)
Published in Genome research (01.01.2012)
Get full text
Journal Article
mRNA Capture Sequencing and RT-qPCR for the Detection of Pathognomonic, Novel, and Secondary Fusion Transcripts in FFPE Tissue: A Sarcoma Showcase
Decock, Anneleen, Creytens, David, Lefever, Steve, Van der Meulen, Joni, Anckaert, Jasper, De Ganck, Ariane, Deleu, Jill, De Wilde, Bram, Fierro, Carolina, Kuersten, Scott, Luypaert, Manuel, Rottiers, Isabelle, Schroth, Gary P., Steyaert, Sandra, Vanderheyden, Katrien, Vanden Eynde, Eveline, Verniers, Kimberly, Verreth, Joke, Van Dorpe, Jo, Vandesompele, Jo
Published in International journal of molecular sciences (01.10.2022)
Published in International journal of molecular sciences (01.10.2022)
Get full text
Journal Article
Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics
Dhondt, Bert, Pinheiro, Cláudio, Geeurickx, Edward, Tulkens, Joeri, Vergauwen, Glenn, Van Der Pol, Edwin, Nieuwland, Rienk, Decock, Anneleen, Miinalainen, Ilkka, Rappu, Pekka, Schroth, Gary, Kuersten, Scott, Vandesompele, Jo, Mestdagh, Pieter, Lumen, Nicolaas, De Wever, Olivier, Hendrix, An
Published in Journal of extracellular vesicles (01.05.2023)
Published in Journal of extracellular vesicles (01.05.2023)
Get full text
Journal Article
New insights into the cellular temporal response to proteostatic stress
Rendleman, Justin, Cheng, Zhe, Maity, Shuvadeep, Kastelic, Nicolai, Munschauer, Mathias, Allgoewer, Kristina, Teo, Guoshou, Zhang, Yun Bin Matteo, Lei, Amy, Parker, Brian, Landthaler, Markus, Freeberg, Lindsay, Kuersten, Scott, Choi, Hyungwon, Vogel, Christine
Published in eLife (12.10.2018)
Published in eLife (12.10.2018)
Get full text
Journal Article
Translation regulation gets its 'omics' moment
Kuersten, Scott, Radek, Agnes, Vogel, Christine, Penalva, Luiz O F
Published in Wiley interdisciplinary reviews. RNA (01.11.2013)
Published in Wiley interdisciplinary reviews. RNA (01.11.2013)
Get more information
Journal Article
SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sample
Gray, Jesse M, Harmin, David A, Boswell, Sarah A, Cloonan, Nicole, Mullen, Thomas E, Ling, Joseph J, Miller, Nimrod, Kuersten, Scott, Ma, Yong-Chao, McCarroll, Steven A, Grimmond, Sean M, Springer, Michael
Published in PloS one (26.02.2014)
Published in PloS one (26.02.2014)
Get full text
Journal Article
Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations
Tuch, Brian B, Laborde, Rebecca R, Xu, Xing, Gu, Jian, Chung, Christina B, Monighetti, Cinna K, Stanley, Sarah J, Olsen, Kerry D, Kasperbauer, Jan L, Moore, Eric J, Broomer, Adam J, Tan, Ruoying, Brzoska, Pius M, Muller, Matthew W, Siddiqui, Asim S, Asmann, Yan W, Sun, Yongming, Kuersten, Scott, Barker, Melissa A, De La Vega, Francisco M, Smith, David I
Published in PloS one (19.02.2010)
Published in PloS one (19.02.2010)
Get full text
Journal Article
Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells
Tamim, Saleh, Vo, Dat T, Uren, Philip J, Qiao, Mei, Bindewald, Eckart, Kasprzak, Wojciech K, Shapiro, Bruce A, Nakaya, Helder I, Burns, Suzanne C, Araujo, Patricia R, Nakano, Ichiro, Radek, Agnes J, Kuersten, Scott, Smith, Andrew D, Penalva, Luiz O F
Published in PloS one (22.01.2014)
Published in PloS one (22.01.2014)
Get full text
Journal Article
Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls
Hulstaert, Eva, Decock, Anneleen, Morlion, Annelien, Everaert, Celine, Verniers, Kimberly, Nuytens, Justine, Nijs, Nele, Schroth, Gary P., Kuersten, Scott, Gross, Stephen M., Mestdagh, Pieter, Vandesompele, Jo
Published in STAR protocols (18.06.2021)
Published in STAR protocols (18.06.2021)
Get full text
Journal Article
A simple and novel method for RNA-seq library preparation of single cell cDNA analysis by hyperactive Tn5 transposase
Brouilette, Scott, Kuersten, Scott, Mein, Charles, Bozek, Monika, Terry, Anna, Dias, Kerith-Rae, Bhaw-Rosun, Leena, Shintani, Yasunori, Coppen, Steven, Ikebe, Chiho, Sawhney, Vinit, Campbell, Niall, Kaneko, Masahiro, Tano, Nobuko, Ishida, Hidekazu, Suzuki, Ken, Yashiro, Kenta
Published in Developmental dynamics (01.10.2012)
Published in Developmental dynamics (01.10.2012)
Get full text
Journal Article
Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells
Kolle, Gabriel, Shepherd, Jill L, Gardiner, Brooke, Kassahn, Karin S, Cloonan, Nicole, Wood, David L A, Nourbakhsh, Ehsan, Taylor, Darrin F, Wani, Shivangi, Chy, Hun S, Zhou, Qi, McKernan, Kevin, Kuersten, Scott, Laslett, Andrew L, Grimmond, Sean M
Published in Genome research (01.12.2011)
Published in Genome research (01.12.2011)
Get full text
Journal Article
Operons in C. elegans: Polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions
Spieth, John, Brooke, Glenn, Kuersten, Scott, Lea, Kristi, Blumenthal, Thomas
Published in Cell (07.05.1993)
Published in Cell (07.05.1993)
Get full text
Journal Article