The tandem duplicator phenotype as a distinct genomic configuration in cancer
Menghi, Francesca, Inaki, Koichiro, Woo, XingYi, Kumar, Pooja A., Grzeda, Krzysztof R., Malhotra, Ankit, Yadav, Vinod, Kim, Hyunsoo, Marquez, Eladio J., Ucar, Duygu, Shreckengast, Phung T., Wagner, Joel P., MacIntyre, George, Karuturi, Krishna R. Murthy, Scully, Ralph, Keck, James, Chuang, Jeffrey H., Liu, Edison T.
Published in Proceedings of the National Academy of Sciences - PNAS (26.04.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (26.04.2016)
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Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines
Woo, Xing Yi, Srivastava, Anuj, Graber, Joel H, Yadav, Vinod, Sarsani, Vishal Kumar, Simons, Al, Beane, Glen, Grubb, Stephen, Ananda, Guruprasad, Liu, Rangjiao, Stafford, Grace, Chuang, Jeffrey H, Airhart, Susan D, Karuturi, R Krishna Murthy, George, Joshy, Bult, Carol J
Published in BMC medical genomics (01.07.2019)
Published in BMC medical genomics (01.07.2019)
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Journal Article
REST regulates distinct transcriptional networks in embryonic and neural stem cells
Johnson, Rory, Teh, Christina Hui-leng, Kunarso, Galih, Wong, Kee Yew, Srinivasan, Gopalan, Cooper, Megan L, Volta, Manuela, Chan, Sarah Su-ling, Lipovich, Leonard, Pollard, Steven M, Karuturi, R Krishna Murthy, Wei, Chia-lin, Buckley, Noel J, Stanton, Lawrence W
Published in PLoS biology (01.10.2008)
Published in PLoS biology (01.10.2008)
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Journal Article
Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology
Lam, Siew Hong, Mathavan, Sinnakarupan, Tong, Yan, Li, Haixia, Karuturi, R Krishna Murthy, Wu, Yilian, Vega, Vinsensius B, Liu, Edison T, Gong, Zhiyuan
Published in PLoS genetics (01.07.2008)
Published in PLoS genetics (01.07.2008)
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Journal Article
Adaptive Sentinel Testing in Workplace for COVID-19 Pandemic
Li, Yi, Chen, Mandy, George, Joshy, Liu, Edison T, Karuturi, R Krishna Murthy
Published in Journal of computational biology (01.04.2023)
Published in Journal of computational biology (01.04.2023)
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Journal Article
Bias in the estimation of false discovery rate in microarray studies
Pawitan, Yudi, Murthy, Karuturi R. Krishna, Michiels, Stefan, Ploner, Alexander
Published in Bioinformatics (15.10.2005)
Published in Bioinformatics (15.10.2005)
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CUP-AI-Dx: A tool for inferring cancer tissue of origin and molecular subtype using RNA gene-expression data and artificial intelligence
Zhao, Yue, Pan, Ziwei, Namburi, Sandeep, Pattison, Andrew, Posner, Atara, Balachander, Shiva, Paisie, Carolyn A., Reddi, Honey V, Rueter, Jens, Gill, Anthony J, Fox, Stephen, Raghav, Kanwal P.S., Flynn, William F, Tothill, Richard W., Li, Sheng, Karuturi, R. Krishna Murthy, George, Joshy
Published in EBioMedicine (01.11.2020)
Published in EBioMedicine (01.11.2020)
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Journal Article
Transcriptomic analyses of sexual dimorphism of the zebrafish liver and the effect of sex hormones
Zheng, Weiling, Xu, Hongyan, Lam, Siew Hong, Luo, Huaien, Karuturi, R Krishna Murthy, Gong, Zhiyuan
Published in PloS one (17.01.2013)
Published in PloS one (17.01.2013)
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Journal Article
MultiDCoX: Multi-factor analysis of differential co-expression
Liany, Herty, Rajapakse, Jagath C, Karuturi, R Krishna Murthy
Published in BMC bioinformatics (28.12.2017)
Published in BMC bioinformatics (28.12.2017)
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Journal Article
High-resolution deconstruction of evolution induced by chemotherapy treatments in breast cancer xenografts
Kim, Hyunsoo, Kumar, Pooja, Menghi, Francesca, Noorbakhsh, Javad, Cerveira, Eliza, Ryan, Mallory, Zhu, Qihui, Ananda, Guruprasad, George, Joshy, Chen, Henry C., Mockus, Susan, Zhang, Chengsheng, Yang, Yan, Keck, James, Karuturi, R. Krishna Murthy, Bult, Carol J., Lee, Charles, Liu, Edison T., Chuang, Jeffrey H.
Published in Scientific reports (18.12.2018)
Published in Scientific reports (18.12.2018)
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Histone H3 lysine 4 monomethylation (H3K4me1) and H3 lysine 9 monomethylation (H3K9me1): Distribution and their association in regulating gene expression under hyperglycaemic/hyperinsulinemic conditions in 3T3 cells
Gupta, Jeena, Kumar, Sandeep, Li, Juntao, Krishna Murthy Karuturi, R., Tikoo, Kulbhushan
Published in Biochimie (01.12.2012)
Published in Biochimie (01.12.2012)
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Journal Article
Identifying Driver Genes in Cancer by Triangulating Gene Expression, Gene Location, and Survival Data
Rouam, Sigrid, Miller, Lance D., Karuturi, R. Krishna Murthy
Published in Cancer Informatics (01.01.2014)
Published in Cancer Informatics (01.01.2014)
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Journal Article
Book Review
A human in vitro model system for investigating genome-wide host responses to SARS coronavirus infection
Ng, Lisa F P, Hibberd, Martin L, Ooi, Eng-Eong, Tang, Kin-Fai, Neo, Soek-Ying, Tan, Jenny, Murthy, Karuturi R Krishna, Vega, Vinsensius B, Chia, Jer-Ming, Liu, Edison T, Ren, Ee-Chee
Published in BMC infectious diseases (09.09.2004)
Published in BMC infectious diseases (09.09.2004)
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Journal Article
Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression
Gong, Zhiyuan, Lam, Siew Hong, Wu, Yi Lian, Vega, Vinsensius B, Miller, Lance D, Spitsbergen, Jan, Tong, Yan, Zhan, Huiqing, Govindarajan, Kunde R, Lee, Serene, Mathavan, Sinnakarupan, Krishna Murthy, Karuturi R, Buhler, Donald R, Liu, Edison T
Published in Nature biotechnology (01.01.2006)
Published in Nature biotechnology (01.01.2006)
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Transfer learning‐trained convolutional neural networks identify novel MRI biomarkers of Alzheimer's disease progression
Li, Yi, Haber, Annat, Preuss, Christoph, John, Cai, Uyar, Asli, Yang, Hongtian Stanley, Logsdon, Benjamin A., Philip, Vivek, Karuturi, R. Krishna Murthy, Carter, Gregory W.
Published in Alzheimer's & dementia : diagnosis, assessment & disease monitoring (2021)
Published in Alzheimer's & dementia : diagnosis, assessment & disease monitoring (2021)
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Bioinformatics Core Survey Highlights the Challenges Facing Data Analysis Facilities
Dragon, Julie A, Gates, Chris, Sui, Shannan Ho, Hutchinson, John N, Karuturi, R Krishna Murthy, Kucukural, Alper, Polson, Shawn, Riva, Alberto, Settles, Matthew Lee, Thimmapuram, Jyothi, Levine, Stuart S
Published in Journal of biomolecular techniques (01.07.2020)
Published in Journal of biomolecular techniques (01.07.2020)
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Journal Article
Identification of cell cycle-regulated genes in fission yeast
Peng, Xu, Karuturi, R Krishna Murthy, Miller, Lance D, Lin, Kui, Jia, Yonghui, Kondu, Pinar, Wang, Long, Wong, Lim-Soon, Liu, Edison T, Balasubramanian, Mohan K, Liu, Jianhua
Published in Molecular biology of the cell (01.03.2005)
Published in Molecular biology of the cell (01.03.2005)
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