Realizing the Promise of Reverse Phase Protein Arrays for Clinical, Translational, and Basic Research: A Workshop Report
Akbani, Rehan, Becker, Karl-Friedrich, Carragher, Neil, Goldstein, Ted, de Koning, Leanne, Korf, Ulrike, Liotta, Lance, Mills, Gordon B., Nishizuka, Satoshi S., Pawlak, Michael, Petricoin, Emanuel F., Pollard, Harvey B., Serrels, Bryan, Zhu, Jingchun
Published in Molecular & cellular proteomics (01.07.2014)
Published in Molecular & cellular proteomics (01.07.2014)
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Journal Article
Integrative analysis of multi-platform reverse-phase protein array data for the pharmacodynamic assessment of response to targeted therapies
Byron, Adam, Bernhardt, Stephan, Ouine, Bérèngere, Cartier, Aurélie, Macleod, Kenneth G, Carragher, Neil O, Sibut, Vonick, Korf, Ulrike, Serrels, Bryan, de Koning, Leanne
Published in Scientific reports (15.12.2020)
Published in Scientific reports (15.12.2020)
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Journal Article
Proteomic profiling of breast cancer metabolism identifies SHMT2 and ASCT2 as prognostic factors
Bernhardt, Stephan, Bayerlová, Michaela, Vetter, Martina, Wachter, Astrid, Mitra, Devina, Hanf, Volker, Lantzsch, Tilmann, Uleer, Christoph, Peschel, Susanne, John, Jutta, Buchmann, Jörg, Weigert, Edith, Bürrig, Karl-Friedrich, Thomssen, Christoph, Korf, Ulrike, Beissbarth, Tim, Wiemann, Stefan, Kantelhardt, Eva Johanna
Published in Breast cancer research : BCR (11.10.2017)
Published in Breast cancer research : BCR (11.10.2017)
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Journal Article
Global microRNA level regulation of EGFR‐driven cell‐cycle protein network in breast cancer
Uhlmann, Stefan, Mannsperger, Heiko, Zhang, Jitao David, Horvat, Emöke‐Ágnes, Schmidt, Christian, Küblbeck, Moritz, Henjes, Frauke, Ward, Aoife, Tschulena, Ulrich, Zweig, Katharina, Korf, Ulrike, Wiemann, Stefan, Sahin, Özgür
Published in Molecular systems biology (2012)
Published in Molecular systems biology (2012)
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Journal Article
PI3K: A master regulator of brain metastasis‐promoting macrophages/microglia
Blazquez, Raquel, Wlochowitz, Darius, Wolff, Alexander, Seitz, Stefanie, Wachter, Astrid, Perera‐Bel, Julia, Bleckmann, Annalen, Beißbarth, Tim, Salinas, Gabriela, Riemenschneider, Markus J., Proescholdt, Martin, Evert, Matthias, Utpatel, Kirsten, Siam, Laila, Schatlo, Bawarjan, Balkenhol, Marko, Stadelmann, Christine, Schildhaus, Hans‐Ulrich, Korf, Ulrike, Reinz, Eileen, Wiemann, Stefan, Vollmer, Elena, Schulz, Mathias, Ritter, Uwe, Hanisch, Uwe K., Pukrop, Tobias
Published in Glia (01.11.2018)
Published in Glia (01.11.2018)
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Journal Article
Dynamic Bayesian Network Modeling of the Interplay between EGFR and Hedgehog Signaling
Fröhlich, Holger, Bahamondez, Gloria, Götschel, Frank, Korf, Ulrike
Published in PloS one (16.11.2015)
Published in PloS one (16.11.2015)
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Journal Article
Coordinated regulation of WNT/β-catenin, c-Met, and integrin signalling pathways by miR-193b controls triple negative breast cancer metastatic traits
Giacomelli, Chiara, Jung, Janine, Wachter, Astrid, Ibing, Susanne, Will, Rainer, Uhlmann, Stefan, Mannsperger, Heiko, Sahin, Özgür, Yarden, Yosef, Beißbarth, Tim, Korf, Ulrike, Körner, Cindy, Wiemann, Stefan
Published in BMC cancer (04.12.2021)
Published in BMC cancer (04.12.2021)
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Journal Article
Unbiased RNAi screen for hepcidin regulators links hepcidin suppression to proliferative Ras/RAF and nutrient-dependent mTOR signaling
Mleczko-Sanecka, Katarzyna, Roche, Franziska, Rita da Silva, Ana, Call, Debora, D'Alessio, Flavia, Ragab, Anan, Lapinski, Philip E., Ummanni, Ramesh, Korf, Ulrike, Oakes, Christopher, Damm, Georg, D'Alessandro, Lorenza A., Klingmüller, Ursula, King, Philip D., Boutros, Michael, Hentze, Matthias W., Muckenthaler, Martina U.
Published in Blood (06.03.2014)
Published in Blood (06.03.2014)
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Journal Article
TMPRSS2-ERG -specific transcriptional modulation is associated with prostate cancer biomarkers and TGF-β signaling
Brase, Jan C, Johannes, Marc, Mannsperger, Heiko, Fälth, Maria, Metzger, Jennifer, Kacprzyk, Lukasz A, Andrasiuk, Tatjana, Gade, Stephan, Meister, Michael, Sirma, Hüseyin, Sauter, Guido, Simon, Ronald, Schlomm, Thorsten, Beissbarth, Tim, Korf, Ulrike, Kuner, Ruprecht, Sültmann, Holger
Published in BMC cancer (05.12.2011)
Published in BMC cancer (05.12.2011)
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Journal Article
RPPanalyzer: Analysis of reverse-phase protein array data
Mannsperger, Heiko A., Gade, Stephan, Henjes, Frauke, Beissbarth, Tim, Korf, Ulrike
Published in Bioinformatics (01.09.2010)
Published in Bioinformatics (01.09.2010)
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Journal Article
Disentangling ERBB Signaling in Breast Cancer Subtypes-A Model-Based Analysis
Kemmer, Svenja, Berdiel-Acer, Mireia, Reinz, Eileen, Sonntag, Johanna, Tarade, Nooraldeen, Bernhardt, Stephan, Fehling-Kaschek, Mirjam, Hasmann, Max, Korf, Ulrike, Wiemann, Stefan, Timmer, Jens
Published in Cancers (12.05.2022)
Published in Cancers (12.05.2022)
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Journal Article
Evaluation of reverse phase protein array (RPPA)-based pathway-activation profiling in 84 non-small cell lung cancer (NSCLC) cell lines as platform for cancer proteomics and biomarker discovery
Ummanni, Ramesh, Mannsperger, Heiko A., Sonntag, Johanna, Oswald, Marcus, Sharma, Ashwini K., König, Rainer, Korf, Ulrike
Published in Biochimica et biophysica acta (01.05.2014)
Published in Biochimica et biophysica acta (01.05.2014)
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Journal Article
High-Throughput Profiling of Colorectal Cancer Liver Metastases Reveals Intra- and Inter-Patient Heterogeneity in the EGFR and WNT Pathways Associated with Clinical Outcome
Menck, Kerstin, Wlochowitz, Darius, Wachter, Astrid, Conradi, Lena-Christin, Wolff, Alexander, Scheel, Andreas H, Korf, Ulrike, Wiemann, Stefan, Schildhaus, Hans-Ulrich, Bohnenberger, Hanibal, Wingender, Edgar, Pukrop, Tobias, Homayounfar, Kia, Beißbarth, Tim, Bleckmann, Annalen
Published in Cancers (21.04.2022)
Published in Cancers (21.04.2022)
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Journal Article
RPPanalyzer Toolbox: An improved R package for analysis of reverse phase protein array data
von der Heyde, Silvia, Sonntag, Johanna, Kaschek, Daniel, Bender, Christian, Bues, Johannes, Wachter, Astrid, Timmer, Jens, Korf, Ulrike, Beißbarth, Tim
Published in BioTechniques (01.09.2014)
Published in BioTechniques (01.09.2014)
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Journal Article
Infrared-based protein detection arrays for quantitative proteomics
Loebke, Christian, Sueltmann, Holger, Schmidt, Christian, Henjes, Frauke, Wiemann, Stefan, Poustka, Annemarie, Korf, Ulrike
Published in Proteomics (Weinheim) (01.02.2007)
Published in Proteomics (Weinheim) (01.02.2007)
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Journal Article
Coordinated Pulses of mRNA and of Protein Translation or Degradation Produce EGF-Induced Protein Bursts
Golan-Lavi, Roni, Giacomelli, Chiara, Fuks, Garold, Zeisel, Amit, Sonntag, Johanna, Sinha, Sanchari, Köstler, Wolfgang, Wiemann, Stefan, Korf, Ulrike, Yarden, Yosef, Domany, Eytan
Published in Cell reports (Cambridge) (28.03.2017)
Published in Cell reports (Cambridge) (28.03.2017)
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Journal Article
Peroxiredoxins 3 and 4 Are Overexpressed in Prostate Cancer Tissue and Affect the Proliferation of Prostate Cancer Cells in Vitro
Ummanni, Ramesh, Barreto, Frederico, Venz, Simone, Scharf, Christian, Barett, Christine, Mannsperger, Heiko A, Brase, Jan Christoph, Kuner, Ruprecht, Schlomm, Thorsten, Sauter, Guido, Sültmann, Holger, Korf, Ulrike, Bokemeyer, Carsten, Walther, Reinhard, Brümmendorf, Tim H, Balabanov, Stefan
Published in Journal of proteome research (06.04.2012)
Published in Journal of proteome research (06.04.2012)
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Journal Article
Triplex DNA-binding proteins are associated with clinical outcomes revealed by proteomic measurements in patients with colorectal cancer
Nelson, Laura D, Bender, Christian, Mannsperger, Heiko, Buergy, Daniel, Kambakamba, Patryk, Mudduluru, Giridhar, Korf, Ulrike, Hughes, Dennis, Van Dyke, Michael W, Allgayer, Heike
Published in Molecular cancer (08.06.2012)
Published in Molecular cancer (08.06.2012)
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Journal Article
Synergism between Hedgehog-GLI and EGFR signaling in Hedgehog-responsive human medulloblastoma cells induces downregulation of canonical Hedgehog-target genes and stabilized expression of GLI1
Götschel, Frank, Berg, Daniela, Gruber, Wolfgang, Bender, Christian, Eberl, Markus, Friedel, Myriam, Sonntag, Johanna, Rüngeler, Elena, Hache, Hendrik, Wierling, Christoph, Nietfeld, Wilfried, Lehrach, Hans, Frischauf, Annemarie, Schwartz-Albiez, Reinhard, Aberger, Fritz, Korf, Ulrike
Published in PloS one (10.06.2013)
Published in PloS one (10.06.2013)
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