Gene content, phage cycle regulation model and prophage inactivation disclosed by prophage genomics in the Helicobacter pylori Genome Project
Vale, Filipa F., Roberts, Richard J., Kobayashi, Ichizo, Camargo, M. Constanza, Rabkin, Charles S.
Published in Gut microbes (31.12.2024)
Published in Gut microbes (31.12.2024)
Get full text
Journal Article
Evolution of cagA oncogene of Helicobacter pylori through recombination
Furuta, Yoshikazu, Yahara, Koji, Hatakeyama, Masanori, Kobayashi, Ichizo
Published in PloS one (11.08.2011)
Published in PloS one (11.08.2011)
Get full text
Journal Article
Chromosome painting in silico in a bacterial species reveals fine population structure
Yahara, Koji, Furuta, Yoshikazu, Oshima, Kenshiro, Yoshida, Masaru, Azuma, Takeshi, Hattori, Masahira, Uchiyama, Ikuo, Kobayashi, Ichizo
Published in Molecular biology and evolution (01.06.2013)
Published in Molecular biology and evolution (01.06.2013)
Get full text
Journal Article
Methylome diversification through changes in DNA methyltransferase sequence specificity
Furuta, Yoshikazu, Namba-Fukuyo, Hiroe, Shibata, Tomoko F, Nishiyama, Tomoaki, Shigenobu, Shuji, Suzuki, Yutaka, Sugano, Sumio, Hasebe, Mitsuyasu, Kobayashi, Ichizo
Published in PLoS genetics (01.04.2014)
Published in PLoS genetics (01.04.2014)
Get full text
Journal Article
Domain movement within a gene: a novel evolutionary mechanism for protein diversification
Furuta, Yoshikazu, Kawai, Mikihiko, Uchiyama, Ikuo, Kobayashi, Ichizo
Published in PloS one (14.04.2011)
Published in PloS one (14.04.2011)
Get full text
Journal Article
Networking and Specificity-Changing DNA Methyltransferases in Helicobacter pylori
Yano, Hirokazu, Alam, Md. Zobaidul, Rimbara, Emiko, Shibata, Tomoko F., Fukuyo, Masaki, Furuta, Yoshikazu, Nishiyama, Tomoaki, Shigenobu, Shuji, Hasebe, Mitsuyasu, Toyoda, Atsushi, Suzuki, Yutaka, Sugano, Sumio, Shibayama, Keigo, Kobayashi, Ichizo
Published in Frontiers in microbiology (17.07.2020)
Published in Frontiers in microbiology (17.07.2020)
Get full text
Journal Article
Evolution in an oncogenic bacterial species with extreme genome plasticity: Helicobacter pylori East Asian genomes
Kawai, Mikihiko, Furuta, Yoshikazu, Yahara, Koji, Tsuru, Takeshi, Oshima, Kenshiro, Handa, Naofumi, Takahashi, Noriko, Yoshida, Masaru, Azuma, Takeshi, Hattori, Masahira, Uchiyama, Ikuo, Kobayashi, Ichizo
Published in BMC microbiology (16.05.2011)
Published in BMC microbiology (16.05.2011)
Get full text
Journal Article
Elderly onset age is associated with low efficacy of first anti-tumor necrosis factor treatment in patients with inflammatory bowel disease
Amano, Takahiro, Shinzaki, Shinichiro, Asakura, Akiko, Tashiro, Taku, Tani, Mizuki, Otake, Yuriko, Yoshihara, Takeo, Iwatani, Shuko, Yamada, Takuya, Sakakibara, Yuko, Osugi, Naoto, Ishii, Shuji, Egawa, Satoshi, Araki, Manabu, Arimoto, Yuki, Nakahara, Masanori, Murayama, Yoko, Kobayashi, Ichizo, Kinoshita, Kazuo, Ogawa, Hiroyuki, Hiyama, Satoshi, Shibukawa, Narihiro, Komori, Masato, Okuda, Yorihide, Kizu, Takashi, Yoshii, Shunsuke, Tsujii, Yoshiki, Hayashi, Yoshito, Inoue, Takahiro, Iijima, Hideki, Takehara, Tetsuo
Published in Scientific reports (29.03.2022)
Published in Scientific reports (29.03.2022)
Get full text
Journal Article
A Novel Approach to Helicobacter pylori Pan-Genome Analysis for Identification of Genomic Islands
Uchiyama, Ikuo, Albritton, Jacob, Fukuyo, Masaki, Kojima, Kenji K, Yahara, Koji, Kobayashi, Ichizo
Published in PloS one (09.08.2016)
Published in PloS one (09.08.2016)
Get full text
Journal Article
Molecular determinants responsible for recognition of the single-stranded DNA regulatory sequence, χ, by RecBCD enzyme
Handa, Naofumi, Yang, Liang, Dillingham, Mark S., Kobayashi, Ichizo, Wigley, Dale B., Kowalczykowski, Stephen C.
Published in Proceedings of the National Academy of Sciences - PNAS (05.06.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (05.06.2012)
Get full text
Journal Article
Alterations in rRNA-mRNA interaction during plastid evolution
Lim, Kyungtaek, Kobayashi, Ichizo, Nakai, Kenta
Published in Molecular biology and evolution (01.07.2014)
Published in Molecular biology and evolution (01.07.2014)
Get full text
Journal Article
Microevolution of Virulence-Related Genes in Helicobacter pylori Familial Infection
Furuta, Yoshikazu, Konno, Mutsuko, Osaki, Takako, Yonezawa, Hideo, Ishige, Taichiro, Imai, Misaki, Shiwa, Yuh, Shibata-Hatta, Mari, Kanesaki, Yu, Yoshikawa, Hirofumi, Kamiya, Shigeru, Kobayashi, Ichizo
Published in PloS one (15.05.2015)
Published in PloS one (15.05.2015)
Get full text
Journal Article
Birth and death of genes linked to chromosomal inversion
Furuta, Yoshikazu, Kawai, Mikihiko, Yahara, Koji, Takahashi, Noriko, Handa, Naofumi, Tsuru, Takeshi, Oshima, Kenshiro, Yoshida, Masaru, Azuma, Takeshi, Hattori, Masahira, Uchiyama, Ikuo, Kobayashi, Ichizo
Published in Proceedings of the National Academy of Sciences - PNAS (25.01.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (25.01.2011)
Get full text
Journal Article