Reconstructing the genome of the most recent common ancestor of flowering plants
Murat, Florent, Armero, Alix, Pont, Caroline, Klopp, Christophe, Salse, Jérôme
Published in Nature genetics (01.04.2017)
Published in Nature genetics (01.04.2017)
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Journal Article
Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets
Asma, Zened, Sylvie, Combes, Laurent, Cauquil, Jérôme, Mariette, Christophe, Klopp, Olivier, Bouchez, Annabelle, Troegeler-Meynadier, Francis, Enjalbert
Published in FEMS microbiology ecology (01.02.2013)
Published in FEMS microbiology ecology (01.02.2013)
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Journal Article
Genetics of nodulation in Aeschynomene evenia uncovers mechanisms of the rhizobium–legume symbiosis
Quilbé, Johan, Lamy, Léo, Brottier, Laurent, Leleux, Philippe, Fardoux, Joël, Rivallan, Ronan, Benichou, Thomas, Guyonnet, Rémi, Becana, Manuel, Villar, Irene, Garsmeur, Olivier, Hufnagel, Bárbara, Delteil, Amandine, Gully, Djamel, Chaintreuil, Clémence, Pervent, Marjorie, Cartieaux, Fabienne, Bourge, Mickaël, Valentin, Nicolas, Martin, Guillaume, Fontaine, Loïc, Droc, Gaëtan, Dereeper, Alexis, Farmer, Andrew, Libourel, Cyril, Nouwen, Nico, Gressent, Frédéric, Mournet, Pierre, D’Hont, Angélique, Giraud, Eric, Klopp, Christophe, Arrighi, Jean-François
Published in Nature communications (05.02.2021)
Published in Nature communications (05.02.2021)
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Journal Article
Biological rhythms in the deep-sea hydrothermal mussel Bathymodiolus azoricus
Mat, Audrey M., Sarrazin, Jozée, Markov, Gabriel V., Apremont, Vincent, Dubreuil, Christine, Eché, Camille, Fabioux, Caroline, Klopp, Christophe, Sarradin, Pierre-Marie, Tanguy, Arnaud, Huvet, Arnaud, Matabos, Marjolaine
Published in Nature communications (10.07.2020)
Published in Nature communications (10.07.2020)
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Journal Article
Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation
Pan, Qiaowei, Feron, Romain, Yano, Ayaka, Guyomard, René, Jouanno, Elodie, Vigouroux, Estelle, Wen, Ming, Busnel, Jean-Mickaël, Bobe, Julien, Concordet, Jean-Paul, Parrinello, Hugues, Journot, Laurent, Klopp, Christophe, Lluch, Jérôme, Roques, Céline, Postlethwait, John, Schartl, Manfred, Herpin, Amaury, Guiguen, Yann
Published in PLoS genetics (22.08.2019)
Published in PLoS genetics (22.08.2019)
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Journal Article
Analysis of large 16S rRNA Illumina data sets: Impact of singleton read filtering on microbial community description
Auer, Lucas, Mariadassou, Mahendra, O'Donohue, Michael, Klopp, Christophe, Hernandez‐Raquet, Guillermina
Published in Molecular ecology resources (01.11.2017)
Published in Molecular ecology resources (01.11.2017)
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Journal Article
Gonad transcriptome analysis of pearl oyster Pinctada margaritifera: identification of potential sex differentiation and sex determining genes
Teaniniuraitemoana, Vaihiti, Huvet, Arnaud, Levy, Peva, Klopp, Christophe, Lhuillier, Emeline, Gaertner-Mazouni, Nabila, Gueguen, Yannick, Le Moullac, Gilles
Published in BMC genomics (18.06.2014)
Published in BMC genomics (18.06.2014)
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Journal Article
Whole genome sequencing reveals signals of adaptive admixture in Creole cattle
Ben-Jemaa, Slim, Adam, Gabriele, Boussaha, Mekki, Bardou, Philippe, Klopp, Christophe, Mandonnet, Nathalie, Naves, Michel
Published in Scientific reports (27.07.2023)
Published in Scientific reports (27.07.2023)
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Journal Article
Contrasting Gene Decay in Subterranean Vertebrates: Insights from Cavefishes and Fossorial Mammals
Policarpo, Maxime, Fumey, Julien, Lafargeas, Philippe, Naquin, Delphine, Thermes, Claude, Naville, Magali, Dechaud, Corentin, Volff, Jean-Nicolas, Cabau, Cedric, Klopp, Christophe, Møller, Peter Rask, Bernatchez, Louis, García-Machado, Erik, Rétaux, Sylvie, Casane, Didier
Published in Molecular biology and evolution (23.01.2021)
Published in Molecular biology and evolution (23.01.2021)
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Journal Article
Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its secondary metabolism potential
Choque, Elodie, Klopp, Christophe, Valiere, Sophie, Raynal, José, Mathieu, Florence
Published in BMC genomics (15.03.2018)
Published in BMC genomics (15.03.2018)
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Journal Article
The genome of the ant Tetramorium bicarinatum reveals a tandem organization of venom peptides genes allowing the prediction of their regulatory and evolutionary profiles
Touchard, Axel, Barassé, Valentine, Malgouyre, Jean-Michel, Treilhou, Michel, Klopp, Christophe, Bonnafé, Elsa
Published in BMC genomics (20.01.2024)
Published in BMC genomics (20.01.2024)
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Journal Article
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Jehl, Frédéric, Muret, Kévin, Bernard, Maria, Boutin, Morgane, Lagoutte, Laetitia, Désert, Colette, Dehais, Patrice, Esquerré, Diane, Acloque, Hervé, Giuffra, Elisabetta, Djebali, Sarah, Foissac, Sylvain, Derrien, Thomas, Pitel, Frédérique, Zerjal, Tatiana, Klopp, Christophe, Lagarrigue, Sandrine
Published in Scientific reports (24.11.2020)
Published in Scientific reports (24.11.2020)
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Journal Article
Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens
Feron, Romain, Zahm, Margot, Cabau, Cédric, Klopp, Christophe, Roques, Céline, Bouchez, Olivier, Eché, Camille, Valière, Sophie, Donnadieu, Cécile, Haffray, Pierrick, Bestin, Anastasia, Morvezen, Romain, Acloque, Hervé, Euclide, Peter T., Wen, Ming, Jouano, Elodie, Schartl, Manfred, Postlethwait, John H., Schraidt, Claire, Christie, Mark R., Larson, Wesley A., Herpin, Amaury, Guiguen, Yann
Published in Molecular ecology resources (01.03.2020)
Published in Molecular ecology resources (01.03.2020)
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Journal Article
A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes
Kuhl, Heiner, Tan, Wen Hui, Klopp, Christophe, Kleiner, Wibke, Koyun, Baturalp, Ciorpac, Mitica, Feron, Romain, Knytl, Martin, Kloas, Werner, Schartl, Manfred, Winkler, Christoph, Stöck, Matthias
Published in Nature communications (05.06.2024)
Published in Nature communications (05.06.2024)
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Journal Article
Soluble CD14 produced by bovine mammary epithelial cells modulates their response to full length LPS
Védrine, Mégane, Gilbert, Florence B, Maman, Sarah, Klopp, Christophe, Gitton, Christophe, Rainard, Pascal, Germon, Pierre
Published in Veterinary research (Paris) (12.06.2024)
Published in Veterinary research (Paris) (12.06.2024)
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Journal Article
Design and characterization of a 52K SNP chip for goats
Tosser-Klopp, Gwenola, Bardou, Philippe, Bouchez, Olivier, Cabau, Cédric, Crooijmans, Richard, Dong, Yang, Donnadieu-Tonon, Cécile, Eggen, André, Heuven, Henri C M, Jamli, Saadiah, Jiken, Abdullah Johari, Klopp, Christophe, Lawley, Cynthia T, McEwan, John, Martin, Patrice, Moreno, Carole R, Mulsant, Philippe, Nabihoudine, Ibouniyamine, Pailhoux, Eric, Palhière, Isabelle, Rupp, Rachel, Sarry, Julien, Sayre, Brian L, Tircazes, Aurélie, Jun Wang, Wang, Wen, Zhang, Wenguang
Published in PloS one (22.01.2014)
Published in PloS one (22.01.2014)
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Journal Article
High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
Bartholomé, Jérôme, Mandrou, Eric, Mabiala, André, Jenkins, Jerry, Nabihoudine, Ibouniyamine, Klopp, Christophe, Schmutz, Jeremy, Plomion, Christophe, Gion, Jean‐Marc
Published in The New phytologist (01.06.2015)
Published in The New phytologist (01.06.2015)
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Journal Article
The rise and fall of the ancient northern pike master sex-determining gene
Pan, Qiaowei, Feron, Romain, Jouanno, Elodie, Darras, Hugo, Herpin, Amaury, Koop, Ben, Rondeau, Eric, Goetz, Frederick W, Larson, Wesley A, Bernatchez, Louis, Tringali, Mike, Curran, Stephen S, Saillant, Eric, Denys, Gael Pj, von Hippel, Frank A, Chen, Songlin, López, J Andrés, Verreycken, Hugo, Ocalewicz, Konrad, Guyomard, Rene, Eche, Camille, Lluch, Jerome, Roques, Celine, Hu, Hongxia, Tabor, Roger, DeHaan, Patrick, Nichols, Krista M, Journot, Laurent, Parrinello, Hugues, Klopp, Christophe, Interesova, Elena A, Trifonov, Vladimir, Schartl, Manfred, Postlethwait, John, Guiguen, Yann
Published in eLife (28.01.2021)
Published in eLife (28.01.2021)
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Journal Article
Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues
Degalez, Fabien, Charles, Mathieu, Foissac, Sylvain, Zhou, Haijuan, Guan, Dailu, Fang, Lingzhao, Klopp, Christophe, Allain, Coralie, Lagoutte, Laetitia, Lecerf, Frédéric, Acloque, Hervé, Giuffra, Elisabetta, Pitel, Frédérique, Lagarrigue, Sandrine
Published in Scientific reports (19.03.2024)
Published in Scientific reports (19.03.2024)
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Journal Article