Individualized VDJ recombination predisposes the available Ig sequence space
Slabodkin, Andrei, Chernigovskaya, Maria, Mikocziova, Ivana, Akbar, Rahmad, Scheffer, Lonneke, Pavlović, Milena, Bashour, Habib, Snapkov, Igor, Mehta, Brij Bhushan, Weber, Cédric R, Gutierrez-Marcos, Jose, Sollid, Ludvig M, Haff, Ingrid Hobæk, Sandve, Geir Kjetil, Robert, Philippe A, Greiff, Victor
Published in Genome research (01.12.2021)
Published in Genome research (01.12.2021)
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Journal Article
Differential expression profile of gluten-specific T cells identified by single-cell RNA-seq
Yao, Ying, Wyrozzemski, Lukasz, Lundin, Knut E. A, Sandve, Geir Kjetil, Qiao, Shuo-Wang
Published in PloS one (07.10.2021)
Published in PloS one (07.10.2021)
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Journal Article
Effects of prenatal exposure to (es)citalopram and maternal depression during pregnancy on DNA methylation and child neurodevelopment
Olstad, Emilie Willoch, Nordeng, Hedvig Marie Egeland, Sandve, Geir Kjetil, Lyle, Robert, Gervin, Kristina
Published in Translational psychiatry (05.05.2023)
Published in Translational psychiatry (05.05.2023)
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Journal Article
In silico proof of principle of machine learning-based antibody design at unconstrained scale
Akbar, Rahmad, Robert, Philippe A, Weber, Cédric R, Widrich, Michael, Frank, Robert, Pavlović, Milena, Scheffer, Lonneke, Chernigovskaya, Maria, Snapkov, Igor, Slabodkin, Andrei, Mehta, Brij Bhushan, Miho, Enkelejda, Lund-Johansen, Fridtjof, Andersen, Jan Terje, Hochreiter, Sepp, Hobæk Haff, Ingrid, Klambauer, Günter, Sandve, Geir Kjetil, Greiff, Victor
Published in mAbs (2022)
Published in mAbs (2022)
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Journal Article
Identification of gluten T cell epitopes driving celiac disease
Chlubnová, Markéta, Christophersen, Asbjørn O, Sandve, Geir Kjetil F, Lundin, Knut E A, Jahnsen, Jørgen, Dahal-Koirala, Shiva, Sollid, Ludvig M
Published in Science advances (27.01.2023)
Published in Science advances (27.01.2023)
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Journal Article
Ten simple rules for reproducible computational research
Sandve, Geir Kjetil, Nekrutenko, Anton, Taylor, James, Hovig, Eivind
Published in PLoS computational biology (01.10.2013)
Published in PLoS computational biology (01.10.2013)
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Journal Article
ClusTrack: feature extraction and similarity measures for clustering of genome-wide data sets
Rydbeck, Halfdan, Sandve, Geir Kjetil, Ferkingstad, Egil, Simovski, Boris, Rye, Morten, Hovig, Eivind
Published in PloS one (16.04.2015)
Published in PloS one (16.04.2015)
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Journal Article
Machine learning-driven development of a disease risk score for COVID-19 hospitalization and mortality: a Swedish and Norwegian register-based study
Shakibfar, Saeed, Zhao, Jing, Li, Huiqi, Nordeng, Hedvig, Lupattelli, Angela, Pavlovic, Milena, Sandve, Geir Kjetil, Nyberg, Fredrik, Wettermark, Björn, Hajiebrahimi, Mohammadhossein, Andersen, Morten, Sessa, Maurizio
Published in Frontiers in public health (2023)
Published in Frontiers in public health (2023)
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Journal Article
Biopsy Proteome Score Performs Well as an Effect Measure in a Gluten Challenge Trial of Celiac Disease
Johansen, Anette, Sandve, Geir Kjetil F., Maxwell, Joseph R., Smithson, Glennda, Sollid, Ludvig M., Stamnaes, Jorunn
Published in Clinical gastroenterology and hepatology (30.08.2024)
Published in Clinical gastroenterology and hepatology (30.08.2024)
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Journal Article
Adjustment of spurious correlations in co-expression measurements from RNA-Sequencing data
Hsieh, Ping-Han, Lopes-Ramos, Camila Miranda, Zucknick, Manuela, Sandve, Geir Kjetil, Glass, Kimberly, Kuijjer, Marieke Lydia
Published in Bioinformatics (Oxford, England) (03.10.2023)
Published in Bioinformatics (Oxford, England) (03.10.2023)
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Journal Article
c-Myb Binding Sites in Haematopoietic Chromatin Landscapes
Bengtsen, Mads, Klepper, Kjetil, Gundersen, Sveinung, Cuervo, Ignacio, Drabløs, Finn, Hovig, Eivind, Sandve, Geir Kjetil, Gabrielsen, Odd Stokke, Eskeland, Ragnhild
Published in PloS one (24.07.2015)
Published in PloS one (24.07.2015)
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Journal Article
Ten simple rules for quick and dirty scientific programming
Balaban, Gabriel, Grytten, Ivar, Rand, Knut Dagestad, Scheffer, Lonneke, Sandve, Geir Kjetil
Published in PLoS computational biology (11.03.2021)
Published in PLoS computational biology (11.03.2021)
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Journal Article
hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks
Kalyanasundaram, Sumana, Lefol, Yohan, Gundersen, Sveinung, Rognes, Torbjørn, Alsøe, Lene, Nilsen, Hilde Loge, Hovig, Eivind, Sandve, Geir Kjetil, Domanska, Diana
Published in PloS one (19.07.2023)
Published in PloS one (19.07.2023)
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Journal Article
Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis
Domanska, Diana, Kanduri, Chakravarthi, Simovski, Boris, Sandve, Geir Kjetil
Published in BMC bioinformatics (14.12.2018)
Published in BMC bioinformatics (14.12.2018)
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Journal Article