A stepwise framework for the normalization of array CGH data
Khojasteh, Mehrnoush, Lam, Wan L, Ward, Rabab K, MacAulay, Calum
Published in BMC bioinformatics (18.11.2005)
Published in BMC bioinformatics (18.11.2005)
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Journal Article
Abstract 4030: Case classification with tumor antigen presenting and TGF-β signaling biomarkers to predict anti-PD-1 outcome in GI tract tumors using automated quantitative fluorescence multiplex IHC
Wang, Xiangxue, Moh, Shizen, Hubbard, Antony, Muñoz-Rodríguez, José L., Khojasteh, Mehrnoush, Martin, Jim, Zhu, Qingfeng, Anders, Robert, Diaz, Luis, Pestic-Dragovich, Lidija, Tang, Lei, Zhang, Wenjun
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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Journal Article
Abstract P1-02-17: Artificial intelligence-based whole slide scoring of nuclear breast cancer IHC markers Ki67, ER, and PR matches performance of manual clinical scoring
Kapadia, Monesh, Khojasteh, Mehrnoush, Kouzova, Margarita, Jones, Carol, Xu, Xiao-Meng, Olson, Matthew T., Gladden, Sarah, Sapanara, Nancy, Singh, Shalini, Chen, Chen Chun, Bai, Isaac, Ranger-Moore, Jim, Inge, Landon J., Kurkure, Uday, Bhattacharya, Ipshita, Zhao, Margaret, Zuiderveld, Karel, Chintakindi, Chandana, Lopez, Bryan, Guetter, Christoph
Published in Cancer research (Chicago, Ill.) (15.02.2022)
Published in Cancer research (Chicago, Ill.) (15.02.2022)
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Journal Article
Integrating copy number polymorphisms into array CGH analysis using a robust HMM
Shah, Sohrab P., Xuan, Xiang, DeLeeuw, Ron J., Khojasteh, Mehrnoush, Lam, Wan L., Ng, Raymond, Murphy, Kevin P.
Published in Bioinformatics (15.07.2006)
Published in Bioinformatics (15.07.2006)
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Journal Article
Abstract 5117: An automated 5-plex fluorescent immunohistochemistry enabled characterization of PD-L1 expression and tumor infiltrating immune cells in lung and bladder cancer specimens
Zhang, Wenjun, Hubbard, Antony, Racolta, Adriana, Cummins, Nick, Khojasteh, Mehrnoush, Zhang, Liping, Garsha, Karl, Bredno, Joerg, Harshman, Dustin, Bhaumik, Srabani, Jones, Tobin, Kowanetz, Marcin, Mariathasan, Sanjeev, McCaffery, Ian, Smith, Dustin, Williams, J Andrew, Pestic-Dragovich, Lidija, Morrison, Larry, Tang, Lei
Published in Cancer research (Chicago, Ill.) (15.07.2016)
Published in Cancer research (Chicago, Ill.) (15.07.2016)
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Journal Article
Quantitative image analysis of PD-L1, CD8, CD3, CD68 and FoxP3 protein expression in lung and bladder cancer specimens by fully automated multiplex fluorescence immunohistochemistry
Zhang, Wenjun, Khojasteh, Mehrnoush, Cummins, Nick, Hubbard, Antony, Hurley, John, Zhang, Liping, Elgabry, Ehab, Bredno, Joerg, Harshman, Dustin, Day, William, Kowanetz, Marcin, Mariathasan, Sanjeev, Smith, Dustin, Williams, J. Andrew, Pestic-Dragovich, Lidija, Morrison, Larry E., Tang, Lei
Published in Journal of clinical oncology (20.05.2016)
Published in Journal of clinical oncology (20.05.2016)
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Journal Article
Automated imaging and analysis of hematopoietic CFU assays of mouse bone marrow
Khojasteh, Mehrnoush, Walasek, Marta A, Wognum, Albertus W, Szilvassy, Stephen J, Egeler, Oliver, Woodside, Steven, Poon, Steven, Thomas, Terry, Eaves, Allen
Published in Experimental hematology (01.09.2015)
Published in Experimental hematology (01.09.2015)
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Journal Article
Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group
Amgad, Mohamed, Stovgaard, Elisabeth Specht, Balslev, Eva, Thagaard, Jeppe, Chen, Weijie, Dudgeon, Sarah, Sharma, Ashish, Kerner, Jennifer K, Denkert, Carsten, Yuan, Yinyin, AbdulJabbar, Khalid, Wienert, Stephan, Savas, Peter, Voorwerk, Leonie, Beck, Andrew H, Madabhushi, Anant, Hartman, Johan, Sebastian, Manu M, Horlings, Hugo M, Hudeček, Jan, Ciompi, Francesco, Moore, David A, Singh, Rajendra, Roblin, Elvire, Balancin, Marcelo Luiz, Mathieu, Marie-Christine, Lennerz, Jochen K, Kirtani, Pawan, Chen, I-Chun, Braybrooke, Jeremy P, Pruneri, Giancarlo, Demaria, Sandra, Adams, Sylvia, Schnitt, Stuart J, Lakhani, Sunil R, Rojo, Federico, Comerma, Laura, Badve, Sunil S, Khojasteh, Mehrnoush, Symmans, W Fraser, Sotiriou, Christos, Gonzalez-Ericsson, Paula, Pogue-Geile, Katherine L, Kim, Rim S, Rimm, David L, Viale, Giuseppe, Hewitt, Stephen M, Bartlett, John M S, Penault-Llorca, Frédérique, Goel, Shom, Lien, Huang-Chun, Loibl, Sibylle, Kos, Zuzana, Loi, Sherene, Hanna, Matthew G, Michiels, Stefan, Kok, Marleen, Nielsen, Torsten O, Lazar, Alexander J, Bago-Horvath, Zsuzsanna, Kooreman, Loes F S, van der Laak, Jeroen A W M, Saltz, Joel, Gallas, Brandon D, Kurkure, Uday, Barnes, Michael, Salgado, Roberto, Cooper, Lee A D
Published in NPJ breast cancer (12.05.2020)
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Published in NPJ breast cancer (12.05.2020)
Journal Article
A framework for quantitative assessment of Ki67 distribution in preneoplastic bronchial epithelial lesions
Khojasteh, Mehrnoush, Buys, Timon P H, LeRiche, Jean, Lam, Stephen, Guillaud, Martial, MacAulay, Calum
Published in Analytical and quantitative cytology and histology (01.06.2012)
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Published in Analytical and quantitative cytology and histology (01.06.2012)
Journal Article
Quantification of membrane IHC stains through multi-spectral imaging
Khojasteh, M., Ward, R., MacAulay, C.
Published in 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI) (01.05.2012)
Published in 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI) (01.05.2012)
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Conference Proceeding
Abstract A18: Spatial dynamics of cellular proliferation in preneoplastic lesions: Comparison between bronchial, oral, and cervical epithelium
Guillaud, Martial D., van Niekerk, Dirk, Khojasteh, Mehrnoush, Carraro, Anita, Korbelik, Jagoda, Frung, Priscilla, Kamalov, Rassim, Rosin, Miriam P., Follen, Michele, Lam, Stephen, MacAulay, Calum
Published in Cancer prevention research (Philadelphia, Pa.) (07.01.2010)
Published in Cancer prevention research (Philadelphia, Pa.) (07.01.2010)
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Journal Article
Systems and methods for computing the contributions of autofluorescence in multichannel image
Wang, Xingwei, Ravkin, Ilya, Khojasteh, Mehrnoush, Bredno, Joerg, Shiffman, Smadar
Year of Publication 26.03.2024
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Year of Publication 26.03.2024
Patent
Methods and systems for predicting response to PD-1 axis directed therapeutics
Diaz, Luis, Wang, Xiangxue, Pestic-Dragovich, Lidija, Zhang, Wenjun, Anders, Robert, Khojasteh, Mehrnoush, Martin, Jim F, Tang, Lei
Year of Publication 10.09.2024
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Year of Publication 10.09.2024
Patent
SYSTEMS AND METHODS FOR COMPUTING THE CONTRIBUTIONS OF AUTOFLUORESCENCE IN MULTICHANNEL IMAGE
Wang, Xingwei, Ravkin, Ilya, Khojasteh, Mehrnoush, Bredno, Joerg, Shiffman, Smadar
Year of Publication 23.12.2021
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Year of Publication 23.12.2021
Patent
SYSTEMS AND METHODS FOR COMPUTING THE CONTRIBUTIONS OF AUTOFLUORESCENCE IN MULTICHANNEL IMAGES
RAVKIN, Ilya, BREDNO, Joerg, WANG, Xingwei, KHOJASTEH, Mehrnoush, SHIFFMAN, Smadar
Year of Publication 22.12.2021
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Year of Publication 22.12.2021
Patent
ACTIVE LEARNING SYSTEM FOR DIGITAL PATHOLOGY
MURARI, Nidhin, FELLOWS, Hadley, LARSEN, Justine, SHEIKHZADEH, Fahime, MARTIN, Jim F, KHOJASTEH, Mehrnoush
Year of Publication 21.06.2023
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Year of Publication 21.06.2023
Patent
ACTIVE LEARNING SYSTEM FOR DIGITAL PATHOLOGY
Fellows, Hadley, Sheikhzadeh, Fahime, Khojasteh, Mehrnoush, Martin, Jim F, Larsen, Justine, Murari, Nidhin
Year of Publication 01.06.2023
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Year of Publication 01.06.2023
Patent