A Synthetic Biology Framework for Programming Eukaryotic Transcription Functions
Khalil, Ahmad S., Lu, Timothy K., Bashor, Caleb J., Ramirez, Cherie L., Pyenson, Nora C., Joung, J. Keith, Collins, James J.
Published in Cell (03.08.2012)
Published in Cell (03.08.2012)
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Journal Article
Antibiotic efficacy is linked to bacterial cellular respiration
Lobritz, Michael A, Peter Belenky, Caroline B. M. Porter, Arnaud Gutierrez, Jason H. Yang, Eric G. Schwarz, Daniel J. Dwyer, Ahmad S. Khalil, James J. Collins
Published in Proceedings of the National Academy of Sciences - PNAS (07.07.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (07.07.2015)
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Journal Article
Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies
Bashor, Caleb J, Patel, Nikit, Choubey, Sandeep, Beyzavi, Ali, Kondev, Jané, Collins, James J, Khalil, Ahmad S
Published in Science (American Association for the Advancement of Science) (10.05.2019)
Published in Science (American Association for the Advancement of Science) (10.05.2019)
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Journal Article
Antibiotics induce redox-related physiological alterations as part of their lethality
Dwyer, Daniel J, Belenky, Peter A, Yang, Jason H, MacDonald, I Cody, Martell, Jeffrey D, Takahashi, Noriko, Chan, Clement T Y, Lobritz, Michael A, Braff, Dana, Schwarz, Eric G, Ye, Jonathan D, Pati, Mekhala, Vercruysse, Maarten, Ralifo, Paul S, Allison, Kyle R, Khalil, Ahmad S, Ting, Alice Y, Walker, Graham C, Collins, James J
Published in Proceedings of the National Academy of Sciences - PNAS (20.05.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (20.05.2014)
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Journal Article
Standard cross‐linking protocol versus accelerated and transepithelial cross‐linking protocols for treatment of paediatric keratoconus: a 2‐year comparative study
Iqbal, Mohammed, Elmassry, Ahmed, Saad, Hisham, AM Gad, Ahmed, Ibrahim, Ola, Hamed, Noha, Saeed, Ahmed, S. Khalil, Ahmad, Tawfik, Mohamed, Said, Amr, Amer, Ibrahim, Nooreldin, Asaad, Said, Omar, Reffat, Mohamed, Anwar, Seif, Badawi, Amani
Published in Acta ophthalmologica (Oxford, England) (01.05.2020)
Published in Acta ophthalmologica (Oxford, England) (01.05.2020)
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Journal Article
Using Targeted Chromatin Regulators to Engineer Combinatorial and Spatial Transcriptional Regulation
Keung, Albert J., Bashor, Caleb J., Kiriakov, Szilvia, Collins, James J., Khalil, Ahmad S.
Published in Cell (03.07.2014)
Published in Cell (03.07.2014)
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Journal Article
Dynamic control of Hsf1 during heat shock by a chaperone switch and phosphorylation
Zheng, Xu, Krakowiak, Joanna, Patel, Nikit, Beyzavi, Ali, Ezike, Jideofor, Khalil, Ahmad S, Pincus, David
Published in eLife (10.11.2016)
Published in eLife (10.11.2016)
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Journal Article
Screening microbially produced Δ9-tetrahydrocannabinol using a yeast biosensor workflow
Shaw, William M., Zhang, Yunfeng, Lu, Xinyu, Khalil, Ahmad S., Ladds, Graham, Luo, Xiaozhou, Ellis, Tom
Published in Nature communications (20.09.2022)
Published in Nature communications (20.09.2022)
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Journal Article
Prospective isolation of NKX2-1-expressing human lung progenitors derived from pluripotent stem cells
Hawkins, Finn, Kramer, Philipp, Jacob, Anjali, Driver, Ian, Thomas, Dylan C, McCauley, Katherine B, Skvir, Nicholas, Crane, Ana M, Kurmann, Anita A, Hollenberg, Anthony N, Nguyen, Sinead, Wong, Brandon G, Khalil, Ahmad S, Huang, Sarah Xl, Guttentag, Susan, Rock, Jason R, Shannon, John M, Davis, Brian R, Kotton, Darrell N
Published in The Journal of clinical investigation (01.06.2017)
Published in The Journal of clinical investigation (01.06.2017)
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Journal Article
Chromatin regulation at the frontier of synthetic biology
Keung, Albert J., Joung, J. Keith, Khalil, Ahmad S., Collins, James J.
Published in Nature reviews. Genetics (01.03.2015)
Published in Nature reviews. Genetics (01.03.2015)
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Journal Article
Effects of antibiotic interaction on antimicrobial resistance development in wastewater
Sutradhar, Indorica, Ching, Carly, Desai, Darash, Heins, Zachary, Khalil, Ahmad S., Zaman, Muhammad H.
Published in Scientific reports (13.05.2023)
Published in Scientific reports (13.05.2023)
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Journal Article
Hsf1 and Hsp70 constitute a two-component feedback loop that regulates the yeast heat shock response
Krakowiak, Joanna, Zheng, Xu, Patel, Nikit, Feder, Zoë A, Anandhakumar, Jayamani, Valerius, Kendra, Gross, David S, Khalil, Ahmad S, Pincus, David
Published in eLife (02.02.2018)
Published in eLife (02.02.2018)
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Journal Article
Anti-CRISPR Anopheles mosquitoes inhibit gene drive spread under challenging behavioural conditions in large cages
D’Amato, Rocco, Taxiarchi, Chrysanthi, Galardini, Marco, Trusso, Alessandro, Minuz, Roxana L., Grilli, Silvia, Somerville, Alastair G. T., Shittu, Dammy, Khalil, Ahmad S., Galizi, Roberto, Crisanti, Andrea, Simoni, Alekos, Müller, Ruth
Published in Nature communications (01.02.2024)
Published in Nature communications (01.02.2024)
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Journal Article
Environmental fluctuations reshape an unexpected diversity-disturbance relationship in a microbial community
Mancuso, Christopher P, Lee, Hyunseok, Abreu, Clare I, Gore, Jeff, Khalil, Ahmad S
Published in eLife (03.09.2021)
Published in eLife (03.09.2021)
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Journal Article
Enhancing nutritional niche and host defenses by modifying the gut microbiome
Sun, Qing, Vega, Nic M, Cervantes, Bernardo, Mancuso, Christopher P, Mao, Ning, Taylor, Megan N, Collins, James J, Khalil, Ahmad S, Gore, Jeff, Lu, Timothy K
Published in Molecular systems biology (01.11.2022)
Published in Molecular systems biology (01.11.2022)
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Journal Article
A Genetic Tool to Track Protein Aggregates and Control Prion Inheritance
Newby, Gregory A., Kiriakov, Szilvia, Hallacli, Erinc, Kayatekin, Can, Tsvetkov, Peter, Mancuso, Christopher P., Bonner, J. Maeve, Hesse, William R., Chakrabortee, Sohini, Manogaran, Anita L., Liebman, Susan W., Lindquist, Susan, Khalil, Ahmad S.
Published in Cell (02.11.2017)
Published in Cell (02.11.2017)
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Journal Article
Modeling the impact of drug interactions on therapeutic selectivity
Weinstein, Zohar B., Kuru, Nurdan, Kiriakov, Szilvia, Palmer, Adam C., Khalil, Ahmad S., Clemons, Paul A., Zaman, Muhammad H., Roth, Frederick P., Cokol, Murat
Published in Nature communications (27.08.2018)
Published in Nature communications (27.08.2018)
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