The mutation spectrum revealed by paired genome sequences from a lung cancer patient
Lee, William, Jiang, Zhaoshi, Liu, Jinfeng, Haverty, Peter M., Guan, Yinghui, Stinson, Jeremy, Yue, Peng, Zhang, Yan, Pant, Krishna P., Bhatt, Deepali, Ha, Connie, Johnson, Stephanie, Kennemer, Michael I., Mohan, Sankar, Nazarenko, Igor, Watanabe, Colin, Sparks, Andrew B., Shames, David S., Gentleman, Robert, de Sauvage, Frederic J., Stern, Howard, Pandita, Ajay, Ballinger, Dennis G., Drmanac, Radoje, Modrusan, Zora, Seshagiri, Somasekar, Zhang, Zemin
Published in Nature (London) (27.05.2010)
Published in Nature (London) (27.05.2010)
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Journal Article
The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients
Jiang, Zhaoshi, Jhunjhunwala, Suchit, Liu, Jinfeng, Haverty, Peter M, Kennemer, Michael I, Guan, Yinghui, Lee, William, Carnevali, Paolo, Stinson, Jeremy, Johnson, Stephanie, Diao, Jingyu, Yeung, Stacy, Jubb, Adrian, Ye, Weilan, Wu, Thomas D, Kapadia, Sharookh B, de Sauvage, Frederic J, Gentleman, Robert C, Stern, Howard M, Seshagiri, Somasekar, Pant, Krishna P, Modrusan, Zora, Ballinger, Dennis G, Zhang, Zemin
Published in Genome research (01.04.2012)
Published in Genome research (01.04.2012)
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Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells
Peters, Brock A., Kermani, Bahram G., Sparks, Andrew B., Alferov, Oleg, Hong, Peter, Alexeev, Andrei, Jiang, Yuan, Dahl, Fredrik, Tang, Y. Tom, Haas, Juergen, Robasky, Kimberly, Zaranek, Alexander Wait, Lee, Je-Hyuk, Ball, Madeleine Price, Peterson, Joseph E., Perazich, Helena, Yeung, George, Liu, Jia, Chen, Linsu, Kennemer, Michael I., Pothuraju, Kaliprasad, Konvicka, Karel, Tsoupko-Sitnikov, Mike, Pant, Krishna P., Ebert, Jessica C., Nilsen, Geoffrey B., Baccash, Jonathan, Halpern, Aaron L., Church, George M., Drmanac, Radoje
Published in Nature (London) (12.07.2012)
Published in Nature (London) (12.07.2012)
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Journal Article
Scalable detection of technically challenging variants through modified next‐generation sequencing
Rojahn, Susan, Hambuch, Tina, Adrian, Jessika, Gafni, Erik, Gileta, Alex, Hatchell, Hannah, Johnson, Britt, Kallman, Ben, Karfilis, Kate, Kautzer, Curtis, Kennemer, Michael, Kirk, Lloyd, Kvitek, Daniel, Lettes, Jessica, Macrae, Fenner, Mendez, Fernando, Paul, Joshua, Pellegrino, Maurizio, Preciado, Ronny, Risinger, Jan, Schultz, Matthew, Spurka, Lindsay, Swamy, Sajani, Truty, Rebecca, Usem, Nathan, Velenich, Andrea, Aradhya, Swaroop
Published in Molecular genetics & genomic medicine (01.12.2022)
Published in Molecular genetics & genomic medicine (01.12.2022)
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One in seven pathogenic variants can be challenging to detect by NGS: an analysis of 450,000 patients with implications for clinical sensitivity and genetic test implementation
Lincoln, Stephen E., Hambuch, Tina, Zook, Justin M., Bristow, Sara L., Hatchell, Kathryn, Truty, Rebecca, Kennemer, Michael, Shirts, Brian H., Fellowes, Andrew, Chowdhury, Shimul, Klee, Eric W., Mahamdallie, Shazia, Cleveland, Megan H., Vallone, Peter M., Ding, Yan, Seal, Sheila, DeSilva, Wasanthi, Tomson, Farol L., Huang, Catherine, Garlick, Russell K., Rahman, Nazneen, Salit, Marc, Kingsmore, Stephen F., Ferber, Matthew J., Aradhya, Swaroop, Nussbaum, Robert L.
Published in Genetics in medicine (01.09.2021)
Published in Genetics in medicine (01.09.2021)
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Journal Article
Patterns of mosaicism for sequence and copy-number variants discovered through clinical deep sequencing of disease-related genes in one million individuals
Truty, Rebecca, Rojahn, Susan, Ouyang, Karen, Kautzer, Curtis, Kennemer, Michael, Pineda-Alvarez, Daniel, Johnson, Britt, Stafford, Amanda, Basel-Salmon, Lina, Saitta, Sulagna, Slavotinek, Anne, Chandrasekharappa, Settara C., Suarez, Carlos Jose, Burnett, Leslie, Nussbaum, Robert L., Aradhya, Swaroop
Published in American journal of human genetics (06.04.2023)
Published in American journal of human genetics (06.04.2023)
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Journal Article
Resequencing of Nicotinic Acetylcholine Receptor Genes and Association of Common and Rare Variants with the Fagerström Test for Nicotine Dependence
WESSEL, Jennifer, MCDONALD, Sarah M, MICHEL, Martha, JACK, Lisa, BALLINGER, Dennis G, MCCLURE, Jennifer B, SWAN, Gary E, BERGEN, Andrew W, HINDS, David A, STOKOWSKI, Renee P, JAVITZ, Harold S, KENNEMER, Michael, KRASNOW, Ruth, DIRKS, William, HARDIN, Jill, PITTS, Steven J
Published in Neuropsychopharmacology (New York, N.Y.) (01.11.2010)
Published in Neuropsychopharmacology (New York, N.Y.) (01.11.2010)
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Journal Article
Accurate whole genome sequencing and haplotyping from10-20 human cells
Peters, Brock A., Kermani, Bahram G., Sparks, Andrew B., Alferov, Oleg, Hong, Peter, Alexeev, Andrei, Jiang, Yuan, Dahl, Fredrik, Tang, Y. Tom, Haas, Juergen, Robasky, Kimberly, Zaranek, Alexander Wait, Lee, Je-Hyuk, Ball, Madeleine Price, Peterson, Joseph E., Perazich, Helena, Yeung, George, Liu, Jia, Chen, Linsu, Kennemer, Michael I., Pothuraju, Kaliprasad, Konvicka, Karel, Tsoupko-Sitnikov, Mike, Pant, Krishna P., Ebert, Jessica C., Nilsen, Geoffrey B., Baccash, Jonathan, Halpern, Aaron L., Church, George M., Drmanac, Radoje
Published in Nature (London) (11.07.2012)
Published in Nature (London) (11.07.2012)
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Journal Article
Resequencing of Nicotinic Acetylcholine Receptor Genes and Association of Common and Rare Variants with the Fagerstroem Test for Nicotine Dependence
Wessel, Jennifer, McDonald, Sarah M, Hinds, David A, Stokowski, Renee P, Javitz, Harold S, Kennemer, Michael, Krasnow, Ruth, Dirks, William, Hardin, Jill, Pitts, Steven J, Michel, Martha, Jack, Lisa, Ballinger, Dennis G, McClure, Jennifer B, Swan, Gary E, Bergen, Andrew W
Published in Neuropsychopharmacology (New York, N.Y.) (01.11.2010)
Published in Neuropsychopharmacology (New York, N.Y.) (01.11.2010)
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Journal Article
SELECTION PROBE AMPLIFICATION
SPARKS ANDREW B, FU GLENN, BALLINGER DENNIS, PETHIYAGODA CHARIT, SHEN NAIPING, SHEEHAN JOHN, STUVE LAURA, OLLMANN AMY, MONTGOMERY JULIE, KENNEMER MICHAEL
Year of Publication 14.05.2009
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Year of Publication 14.05.2009
Patent
SELECTION PROBE AMPLIFICATION
PETHIYAGODA, CHARIT, SHEEHAN, JOHN, KENNEMER, MICHAEL, MONTGOMERY, JULIE, FU, GLENN, STUVE, LAURA, BALLINGER, DENNIS, SHEN, NAIPING, SPARKS, ANDREW, B, OLLMANN, AMY
Year of Publication 30.04.2009
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Year of Publication 30.04.2009
Patent