Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field
Trachsel, Samuel, Kaeppler, Shawn M, Brown, Kathleen M, Lynch, Jonathan P
Published in Plant and soil (01.04.2011)
Published in Plant and soil (01.04.2011)
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Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays
Sekhon, Rajandeep S, Briskine, Roman, Hirsch, Candice N, Myers, Chad L, Springer, Nathan M, Buell, C Robin, de Leon, Natalia, Kaeppler, Shawn M
Published in PloS one (23.04.2013)
Published in PloS one (23.04.2013)
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Comparative population genomics of maize domestication and improvement
HUFFORD, Matthew B, XUN XU, JINSHENG LAI, MORRELL, Peter L, SHANNON, Laura M, CHI SONG, SPRINGER, Nathan M, SWANSON-WAGNER, Ruth A, TIFFIN, Peter, JUN WANG, GENGYUN ZHANG, DOEBLEY, John, VAN HEERWAARDEN, Joost, MCMULLEN, Michael D, WARE, Doreen, BUCKLER, Edward S, SHUANG YANG, ROSS-IBARRA, Jeffrey, PYHÄJÄRVI, Tanja, CHIA, Jer-Ming, CARTWRIGHT, Reed A, ELSHIRE, Robert J, GLAUBITZ, Jeffrey C, GUILL, Kate E, KAEPPLER, Shawn M
Published in Nature genetics (01.07.2012)
Published in Nature genetics (01.07.2012)
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An Expanded Maize Gene Expression Atlas based on RNA Sequencing and its Use to Explore Root Development
Stelpflug, Scott C., Sekhon, Rajandeep S., Vaillancourt, Brieanne, Hirsch, Candice N., Buell, C. Robin, Leon, Natalia, Kaeppler, Shawn M.
Published in The plant genome (01.03.2016)
Published in The plant genome (01.03.2016)
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Journal Article
Effects of endosperm type and storage length of whole-plant corn silage on nitrogen fraction, fermentation products, zein profile, and starch digestibility
Varela, José, Ferraretto, Luiz F, Kaeppler, Shawn M, de León, Natalia
Published in Journal of dairy science (01.12.2023)
Published in Journal of dairy science (01.12.2023)
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Journal Article
Genome-wide association analysis of stalk biomass and anatomical traits in maize
Mazaheri, Mona, Heckwolf, Marlies, Vaillancourt, Brieanne, Gage, Joseph L, Burdo, Brett, Heckwolf, Sven, Barry, Kerrie, Lipzen, Anna, Ribeiro, Camila Bastos, Kono, Thomas J Y, Kaeppler, Heidi F, Spalding, Edgar P, Hirsch, Candice N, Robin Buell, C, de Leon, Natalia, Kaeppler, Shawn M
Published in BMC plant biology (31.01.2019)
Published in BMC plant biology (31.01.2019)
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A robust, high‐throughput method for computing maize ear, cob, and kernel attributes automatically from images
Miller, Nathan D., Haase, Nicholas J., Lee, Jonghyun, Kaeppler, Shawn M., Leon, Natalia, Spalding, Edgar P.
Published in The Plant journal : for cell and molecular biology (01.01.2017)
Published in The Plant journal : for cell and molecular biology (01.01.2017)
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Journal Article
Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams
Karlen, Steven D., Fasahati, Peyman, Mazaheri, Mona, Serate, Jose, Smith, Rebecca A., Sirobhushanam, Sirisha, Chen, Mingjie, Tymokhin, Vitaliy I., Cass, Cynthia L., Liu, Sarah, Padmakshan, Dharshana, Xie, Dan, Zhang, Yaoping, McGee, Mick A., Russell, Jason D., Coon, Joshua J., Kaeppler, Heidi F., Leon, Natalia, Maravelias, Christos T., Runge, Troy M., Kaeppler, Shawn M., Sedbrook, John C., Ralph, John
Published in ChemSusChem (21.04.2020)
Published in ChemSusChem (21.04.2020)
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Journal Article
Genetic Perturbation of the Maize Methylome
Li, Qing, Eichten, Steven R., Hermanson, Peter J., Zaunbrecher, Virginia M., Song, Jawon, Wendt, Jennifer, Rosenbaum, Heidi, Madzima, Thelma F., Sloan, Amy E., Huang, Ji, Burgess, Daniel L., Richmond, Todd A., McGinnis, Karen M., Meeley, Robert B., Danilevskaya, Olga N., Vaughn, Matthew W., Kaeppler, Shawn M., Jeddeloh, Jeffrey A., Springer, Nathan M.
Published in The Plant cell (01.12.2014)
Published in The Plant cell (01.12.2014)
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Leveraging data from the Genomes-to-Fields Initiative to investigate genotype-by-environment interactions in maize in North America
Lopez-Cruz, Marco, Aguate, Fernando M., Washburn, Jacob D., de Leon, Natalia, Kaeppler, Shawn M., Lima, Dayane Cristina, Tan, Ruijuan, Thompson, Addie, De La Bretonne, Laurence Willard, de los Campos, Gustavo
Published in Nature communications (30.10.2023)
Published in Nature communications (30.10.2023)
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Journal Article
Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes
Salvo, Stella A G D, Hirsch, Candice N, Buell, C Robin, Kaeppler, Shawn M, Kaeppler, Heidi F
Published in PloS one (30.10.2014)
Published in PloS one (30.10.2014)
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Journal Article
Marker density and read depth for genotyping populations using genotyping-by-sequencing
Beissinger, Timothy M, Hirsch, Candice N, Sekhon, Rajandeep S, Foerster, Jillian M, Johnson, James M, Muttoni, German, Vaillancourt, Brieanne, Buell, C Robin, Kaeppler, Shawn M, de Leon, Natalia
Published in Genetics (Austin) (01.04.2013)
Published in Genetics (Austin) (01.04.2013)
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Journal Article
Chromosome-level genome assembly of a regenerable maize inbred line A188
Lin, Guifang, He, Cheng, Zheng, Jun, Koo, Dal-Hoe, Le, Ha, Zheng, Huakun, Tamang, Tej Man, Lin, Jinguang, Liu, Yan, Zhao, Mingxia, Hao, Yangfan, McFraland, Frank, Wang, Bo, Qin, Yang, Tang, Haibao, McCarty, Donald R, Wei, Hairong, Cho, Myeong-Je, Park, Sunghun, Kaeppler, Heidi, Kaeppler, Shawn M, Liu, Yunjun, Springer, Nathan, Schnable, Patrick S, Wang, Guoying, White, Frank F, Liu, Sanzhen
Published in Genome Biology (09.06.2021)
Published in Genome Biology (09.06.2021)
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Journal Article
Genotype-by-environment interactions affecting heterosis in maize
Li, Zhi, Coffey, Lisa, Garfin, Jacob, Miller, Nathan D, White, Michael R, Spalding, Edgar P, de Leon, Natalia, Kaeppler, Shawn M, Schnable, Patrick S, Springer, Nathan M, Hirsch, Candice N
Published in PloS one (17.01.2018)
Published in PloS one (17.01.2018)
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Journal Article
Genetic Architecture of Maize Stalk Strength
Peiffer, Jason A, Flint-Garcia, Sherry A, De Leon, Natalia, McMullen, Michael D, Kaeppler, Shawn M, Buckler, Edward S, De Smet, Ive
Published in PloS one (20.06.2013)
Published in PloS one (20.06.2013)
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