Integrated analysis of multimodal single-cell data
Hao, Yuhan, Hao, Stephanie, Andersen-Nissen, Erica, Mauck, William M., Zheng, Shiwei, Butler, Andrew, Lee, Maddie J., Wilk, Aaron J., Darby, Charlotte, Zager, Michael, Hoffman, Paul, Stoeckius, Marlon, Papalexi, Efthymia, Mimitou, Eleni P., Jain, Jaison, Srivastava, Avi, Stuart, Tim, Fleming, Lamar M., Yeung, Bertrand, Rogers, Angela J., McElrath, Juliana M., Blish, Catherine A., Gottardo, Raphael, Smibert, Peter, Satija, Rahul
Published in Cell (24.06.2021)
Published in Cell (24.06.2021)
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MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data
Finak, Greg, McDavid, Andrew, Yajima, Masanao, Deng, Jingyuan, Gersuk, Vivian, Shalek, Alex K, Slichter, Chloe K, Miller, Hannah W, McElrath, M Juliana, Prlic, Martin, Linsley, Peter S, Gottardo, Raphael
Published in Genome Biology (10.12.2015)
Published in Genome Biology (10.12.2015)
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mRNA vaccination boosts cross-variant neutralizing antibodies elicited by SARS-CoV-2 infection
Stamatatos, Leonidas, Czartoski, Julie, Wan, Yu-Hsin, Homad, Leah J, Rubin, Vanessa, Glantz, Hayley, Neradilek, Moni, Seydoux, Emilie, Jennewein, Madeleine F, MacCamy, Anna J, Feng, Junli, Mize, Gregory, De Rosa, Stephen C, Finzi, Andrés, Lemos, Maria P, Cohen, Kristen W, Moodie, Zoe, McElrath, M Juliana, McGuire, Andrew T
Published in Science (25.06.2021)
Published in Science (25.06.2021)
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HIV-1 Integration Landscape during Latent and Active Infection
Cohn, Lillian B., Silva, Israel T., Oliveira, Thiago Y., Rosales, Rafael A., Parrish, Erica H., Learn, Gerald H., Hahn, Beatrice H., Czartoski, Julie L., McElrath, M. Juliana, Lehmann, Clara, Klein, Florian, Caskey, Marina, Walker, Bruce D., Siliciano, Janet D., Siliciano, Robert F., Jankovic, Mila, Nussenzweig, Michel C.
Published in Cell (29.01.2015)
Published in Cell (29.01.2015)
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Efficacy Trial of a DNA/rAd5 HIV-1 Preventive Vaccine
Hammer, Scott M, Sobieszczyk, Magdalena E, Janes, Holly, Karuna, Shelly T, Mulligan, Mark J, Grove, Doug, Koblin, Beryl A, Buchbinder, Susan P, Keefer, Michael C, Tomaras, Georgia D, Frahm, Nicole, Hural, John, Anude, Chuka, Graham, Barney S, Enama, Mary E, Adams, Elizabeth, DeJesus, Edwin, Novak, Richard M, Frank, Ian, Bentley, Carter, Ramirez, Shelly, Fu, Rong, Koup, Richard A, Mascola, John R, Nabel, Gary J, Montefiori, David C, Kublin, James, McElrath, M. Juliana, Corey, Lawrence, Gilbert, Peter B
Published in The New England journal of medicine (28.11.2013)
Published in The New England journal of medicine (28.11.2013)
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Persistent serum protein signatures define an inflammatory subcategory of long COVID
Talla, Aarthi, Vasaikar, Suhas V., Szeto, Gregory Lee, Lemos, Maria P., Czartoski, Julie L., MacMillan, Hugh, Moodie, Zoe, Cohen, Kristen W., Fleming, Lamar B., Thomson, Zachary, Okada, Lauren, Becker, Lynne A., Coffey, Ernest M., De Rosa, Stephen C., Newell, Evan W., Skene, Peter J., Li, Xiaojun, Bumol, Thomas F., Juliana McElrath, M., Torgerson, Troy R.
Published in Nature communications (09.06.2023)
Published in Nature communications (09.06.2023)
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An Antibody Targeting the Fusion Machinery Neutralizes Dual-Tropic Infection and Defines a Site of Vulnerability on Epstein-Barr Virus
Snijder, Joost, Ortego, Michael S., Weidle, Connor, Stuart, Andrew B., Gray, Matthew D., McElrath, M. Juliana, Pancera, Marie, Veesler, David, McGuire, Andrew T.
Published in Immunity (Cambridge, Mass.) (17.04.2018)
Published in Immunity (Cambridge, Mass.) (17.04.2018)
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Immune-Correlates Analysis of an HIV-1 Vaccine Efficacy Trial
Haynes, Barton F, Gilbert, Peter B, McElrath, M. Juliana, Zolla-Pazner, Susan, Tomaras, Georgia D, Alam, S. Munir, Evans, David T, Montefiori, David C, Karnasuta, Chitraporn, Sutthent, Ruengpueng, Liao, Hua-Xin, DeVico, Anthony L, Lewis, George K, Williams, Constance, Pinter, Abraham, Fong, Youyi, Janes, Holly, DeCamp, Allan, Huang, Yunda, Rao, Mangala, Billings, Erik, Karasavvas, Nicos, Robb, Merlin L, Ngauy, Viseth, de Souza, Mark S, Paris, Robert, Ferrari, Guido, Bailer, Robert T, Soderberg, Kelly A, Andrews, Charla, Berman, Phillip W, Frahm, Nicole, De Rosa, Stephen C, Alpert, Michael D, Yates, Nicole L, Shen, Xiaoying, Koup, Richard A, Pitisuttithum, Punnee, Kaewkungwal, Jaranit, Nitayaphan, Sorachai, Rerks-Ngarm, Supachai, Michael, Nelson L, Kim, Jerome H
Published in The New England journal of medicine (05.04.2012)
Published in The New England journal of medicine (05.04.2012)
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Calibration of two validated SARS-CoV-2 pseudovirus neutralization assays for COVID-19 vaccine evaluation
Huang, Yunda, Borisov, Oleg, Kee, Jia Jin, Carpp, Lindsay N., Wrin, Terri, Cai, Suqin, Sarzotti-Kelsoe, Marcella, McDanal, Charlene, Eaton, Amanda, Pajon, Rolando, Hural, John, Posavad, Christine M., Gill, Katherine, Karuna, Shelly, Corey, Lawrence, McElrath, M. Juliana, Gilbert, Peter B., Petropoulos, Christos J., Montefiori, David C.
Published in Scientific reports (14.12.2021)
Published in Scientific reports (14.12.2021)
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Dissecting Polyclonal Vaccine-Induced Humoral Immunity against HIV Using Systems Serology
Chung, Amy W., Kumar, Manu P., Arnold, Kelly B., Yu, Wen Han, Schoen, Matthew K., Dunphy, Laura J., Suscovich, Todd J., Frahm, Nicole, Linde, Caitlyn, Mahan, Alison E., Hoffner, Michelle, Streeck, Hendrik, Ackerman, Margaret E., McElrath, M. Juliana, Schuitemaker, Hanneke, Pau, Maria G., Baden, Lindsey R., Kim, Jerome H., Michael, Nelson L., Barouch, Dan H., Lauffenburger, Douglas A., Alter, Galit
Published in Cell (05.11.2015)
Published in Cell (05.11.2015)
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CXCL13 is a plasma biomarker of germinal center activity
Havenar-Daughton, Colin, Lindqvist, Madelene, Heit, Antje, Wu, Jennifer E., Reiss, Samantha M., Kendric, Kayla, Bélanger, Simon, Kasturi, Sudhir Pai, Landais, Elise, Akondy, Rama S., McGuire, Helen M., Bothwell, Marcella, Vagefi, Parsia A., Scully, Eileen, Tomarasm, Georgia D., Davis, Mark M., Poignard, Pascal, Ahmed, Rafi, Walker, Bruce D., Pulendran, Bali, McElrath, M. Juliana, Kaufmann, Daniel E., Crotty, Shane
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2016)
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Vaccination establishes clonal relatives of germinal center T cells in the blood of humans
Heit, Antje, Schmitz, Frank, Gerdts, Sarah, Flach, Britta, Moore, Miranda S, Perkins, Jonathan A, Robins, Harlan S, Aderem, Alan, Spearman, Paul, Tomaras, Georgia D, De Rosa, Stephen C, McElrath, M Juliana
Published in The Journal of experimental medicine (03.07.2017)
Published in The Journal of experimental medicine (03.07.2017)
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Antibody Fc effector functions and IgG3 associate with decreased HIV-1 risk
Neidich, Scott D, Fong, Youyi, Li, Shuying S, Geraghty, Daniel E, Williamson, Brian D, Young, William Chad, Goodman, Derrick, Seaton, Kelly E, Shen, Xiaoying, Sawant, Sheetal, Zhang, Lu, deCamp, Allan C, Blette, Bryan S, Shao, Mengshu, Yates, Nicole L, Feely, Frederick, Pyo, Chul-Woo, Ferrari, Guido, Frank, Ian, Karuna, Shelly T, Swann, Edith M, Mascola, John R, Graham, Barney S, Hammer, Scott M, Sobieszczyk, Magdalena E, Corey, Lawrence, Janes, Holly E, McElrath, M Juliana, Gottardo, Raphael, Gilbert, Peter B, Tomaras, Georgia D
Published in The Journal of clinical investigation (01.11.2019)
Published in The Journal of clinical investigation (01.11.2019)
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HIV-1 vaccine-induced immunity in the test-of-concept Step Study: a case–cohort analysis
McElrath, M Juliana, MD, De Rosa, Stephen C, MD, Moodie, Zoe, PhD, Dubey, Sheri, MS, Kierstead, Lisa, PhD, Janes, Holly, PhD, Defawe, Olivier D, PhD, Carter, Donald K, BS, Hural, John, PhD, Akondy, Rama, PhD, Buchbinder, Susan P, MD, Robertson, Michael N, MD, Mehrotra, Devan V, PhD, Self, Steven G, PhD, Corey, Lawrence, MD, Shiver, John W, PhD, Casimiro, Danilo R, PhD
Published in The Lancet (British edition) (29.11.2008)
Published in The Lancet (British edition) (29.11.2008)
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Machine learning identifies molecular regulators and therapeutics for targeting SARS‐CoV2‐induced cytokine release
Chan, Marina, Vijay, Siddharth, McNevin, John, McElrath, M Juliana, Holland, Eric C, Gujral, Taranjit S
Published in Molecular systems biology (01.09.2021)
Published in Molecular systems biology (01.09.2021)
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Broad and Potent Neutralizing Antibodies Recognize the Silent Face of the HIV Envelope
Schoofs, Till, Barnes, Christopher O., Suh-Toma, Nina, Golijanin, Jovana, Schommers, Philipp, Gruell, Henning, West, Anthony P., Bach, Franziska, Lee, Yu Erica, Nogueira, Lilian, Georgiev, Ivelin S., Bailer, Robert T., Czartoski, Julie, Mascola, John R., Seaman, Michael S., McElrath, M. Juliana, Doria-Rose, Nicole A., Klein, Florian, Nussenzweig, Michel C., Bjorkman, Pamela J.
Published in Immunity (Cambridge, Mass.) (18.06.2019)
Published in Immunity (Cambridge, Mass.) (18.06.2019)
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Initial Events in Establishing Vaginal Entry and Infection by Human Immunodeficiency Virus Type-1
Hladik, Florian, Sakchalathorn, Polachai, Ballweber, Lamar, Lentz, Gretchen, Fialkow, Michael, Eschenbach, David, McElrath, M. Juliana
Published in Immunity (Cambridge, Mass.) (01.02.2007)
Published in Immunity (Cambridge, Mass.) (01.02.2007)
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