SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins
Dana, Jose M, Gutmanas, Aleksandras, Tyagi, Nidhi, Qi, Guoying, O’Donovan, Claire, Martin, Maria, Velankar, Sameer
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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PDBe: improved findability of macromolecular structure data in the PDB
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Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
Mir, Saqib, Alhroub, Younes, Anyango, Stephen, Armstrong, David R, Berrisford, John M, Clark, Alice R, Conroy, Matthew J, Dana, Jose M, Deshpande, Mandar, Gupta, Deepti, Gutmanas, Aleksandras, Haslam, Pauline, Mak, Lora, Mukhopadhyay, Abhik, Nadzirin, Nurul, Paysan-Lafosse, Typhaine, Sehnal, David, Sen, Sanchayita, Smart, Oliver S, Varadi, Mihaly, Kleywegt, Gerard J, Velankar, Sameer
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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PDBe: Protein Data Bank in Europe
Gutmanas, Aleksandras, Alhroub, Younes, Battle, Gary M, Berrisford, John M, Bochet, Estelle, Conroy, Matthew J, Dana, Jose M, Fernandez Montecelo, Manuel A, van Ginkel, Glen, Gore, Swanand P, Haslam, Pauline, Hatherley, Rowan, Hendrickx, Pieter M S, Hirshberg, Miriam, Lagerstedt, Ingvar, Mir, Saqib, Mukhopadhyay, Abhik, Oldfield, Thomas J, Patwardhan, Ardan, Rinaldi, Luana, Sahni, Gaurav, Sanz-García, Eduardo, Sen, Sanchayita, Slowley, Robert A, Velankar, Sameer, Wainwright, Michael E, Kleywegt, Gerard J
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
Mir, Saqib, Alhroub, Younes, Anyango, Stephen, Armstrong, David R, Berrisford, John M, Clark, Alice R, Conroy, Matthew J, Dana, Jose M, Deshpande, Mandar, Gupta, Deepti, Gutmanas, Aleksandras, Haslam, Pauline, Mak, Lora, Mukhopadhyay, Abhik, Nadzirin, Nurul, Paysan-Lafosse, Typhaine, Sehnal, David, Sen, Sanchayita, Smart, Oliver S, Varadi, Mihaly, Kleywegt, Gerard J, Velankar, Sameer
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains
Lewis, Tony E, Sillitoe, Ian, Andreeva, Antonina, Blundell, Tom L, Buchan, Daniel W A, Chothia, Cyrus, Cuff, Alison, Dana, Jose M, Filippis, Ioannis, Gough, Julian, Hunter, Sarah, Jones, David T, Kelley, Lawrence A, Kleywegt, Gerard J, Minneci, Federico, Mitchell, Alex, Murzin, Alexey G, Ochoa-Montaño, Bernardo, Rackham, Owen J L, Smith, James, Sternberg, Michael J E, Velankar, Sameer, Yeats, Corin, Orengo, Christine
Published in Nucleic acids research (01.01.2013)
Published in Nucleic acids research (01.01.2013)
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PSICQUIC and PSISCORE: accessing and scoring molecular interactions
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Published in Nature methods (01.07.2011)
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SIFTS: Structure Integration with Function, Taxonomy and Sequences resource
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PDBeCIF: an open-source mmCIF/CIF parsing and processing package
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Published in BMC bioinformatics (23.07.2021)
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Genome3D: exploiting structure to help users understand their sequences
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Published in Nucleic acids research (28.01.2015)
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PDBe: Protein Data Bank in Europe
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Published in Nucleic acids research (01.01.2011)
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Protein Data Bank: the single global archive for 3D macromolecular structure data
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PDBe-KB: a community-driven resource for structural and functional annotations
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Published in Nucleic acids research (08.01.2020)
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PDBe: improved accessibility of macromolecular structure data from PDB and EMDB
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The complex portal--an encyclopaedia of macromolecular complexes
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Protein Data Bank: the single global archive for 3D macromolecular structure data
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Sabater-Abad, Javier, Matellanes-Palacios, María, Bou-Boluda, Laia, Campos-Dana, Juan José, Alemany-Monraval, Pilar, Millán-Parrilla, Fernando
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