BBKNN: fast batch alignment of single cell transcriptomes
Polański, Krzysztof, Young, Matthew D, Miao, Zhichao, Meyer, Kerstin B, Teichmann, Sarah A, Park, Jong-Eun
Published in Bioinformatics (01.02.2020)
Published in Bioinformatics (01.02.2020)
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Developmental cell programs are co-opted in inflammatory skin disease
Reynolds, Gary, Vegh, Peter, Fletcher, James, Poyner, Elizabeth F M, Stephenson, Emily, Goh, Issac, Botting, Rachel A, Huang, Ni, Olabi, Bayanne, Dubois, Anna, Dixon, David, Green, Kile, Maunder, Daniel, Engelbert, Justin, Efremova, Mirjana, Polański, Krzysztof, Jardine, Laura, Jones, Claire, Ness, Thomas, Horsfall, Dave, McGrath, Jim, Carey, Christopher, Popescu, Dorin-Mirel, Webb, Simone, Wang, Xiao-Nong, Sayer, Ben, Park, Jong-Eun, Negri, Victor A, Belokhvostova, Daria, Lynch, Magnus D, McDonald, David, Filby, Andrew, Hagai, Tzachi, Meyer, Kerstin B, Husain, Akhtar, Coxhead, Jonathan, Vento-Tormo, Roser, Behjati, Sam, Lisgo, Steven, Villani, Alexandra-Chloé, Bacardit, Jaume, Jones, Philip H, O'Toole, Edel A, Ogg, Graham S, Rajan, Neil, Reynolds, Nick J, Teichmann, Sarah A, Watt, Fiona M, Haniffa, Muzlifah
Published in Science (American Association for the Advancement of Science) (22.01.2021)
Published in Science (American Association for the Advancement of Science) (22.01.2021)
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Prenatal development of human immunity
Park, Jong-Eun, Jardine, Laura, Gottgens, Berthold, Teichmann, Sarah A, Haniffa, Muzlifah
Published in Science (American Association for the Advancement of Science) (08.05.2020)
Published in Science (American Association for the Advancement of Science) (08.05.2020)
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Single-cell reconstruction of the early maternal–fetal interface in humans
Vento-Tormo, Roser, Efremova, Mirjana, Botting, Rachel A., Turco, Margherita Y., Vento-Tormo, Miquel, Meyer, Kerstin B., Park, Jong-Eun, Stephenson, Emily, Polański, Krzysztof, Goncalves, Angela, Gardner, Lucy, Holmqvist, Staffan, Henriksson, Johan, Zou, Angela, Sharkey, Andrew M., Millar, Ben, Innes, Barbara, Wood, Laura, Wilbrey-Clark, Anna, Payne, Rebecca P., Ivarsson, Martin A., Lisgo, Steve, Filby, Andrew, Rowitch, David H., Bulmer, Judith N., Wright, Gavin J., Stubbington, Michael J. T., Haniffa, Muzlifah, Moffett, Ashley, Teichmann, Sarah A.
Published in Nature (London) (01.11.2018)
Published in Nature (London) (01.11.2018)
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Journal Article
Regulation of Poly(A) Tail and Translation during the Somatic Cell Cycle
Park, Jong-Eun, Yi, Hyerim, Kim, Yoosik, Chang, Hyeshik, Kim, V. Narry
Published in Molecular cell (05.05.2016)
Published in Molecular cell (05.05.2016)
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Immunology in the Era of Single-Cell Technologies
Efremova, Mirjana, Vento-Tormo, Roser, Park, Jong-Eun, Teichmann, Sarah A, James, Kylie R
Published in Annual review of immunology (26.04.2020)
Published in Annual review of immunology (26.04.2020)
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Journal Article
Dicer recognizes the 5′ end of RNA for efficient and accurate processing
Park, Jong-Eun, Heo, Inha, Tian, Yuan, Simanshu, Dhirendra K., Chang, Hyeshik, Jee, David, Patel, Dinshaw J., Kim, V. Narry
Published in Nature (London) (14.07.2011)
Published in Nature (London) (14.07.2011)
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Reconstitution of a functional human thymus by postnatal stromal progenitor cells and natural whole-organ scaffolds
Campinoti, Sara, Gjinovci, Asllan, Ragazzini, Roberta, Zanieri, Luca, Ariza-McNaughton, Linda, Catucci, Marco, Boeing, Stefan, Park, Jong-Eun, Hutchinson, John C., Muñoz-Ruiz, Miguel, Manti, Pierluigi G., Vozza, Gianluca, Villa, Carlo E., Phylactopoulos, Demetra-Ellie, Maurer, Constance, Testa, Giuseppe, Stauss, Hans J., Teichmann, Sarah A., Sebire, Neil J., Hayday, Adrian C., Bonnet, Dominique, Bonfanti, Paola
Published in Nature communications (11.12.2020)
Published in Nature communications (11.12.2020)
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Single-Cell Transcriptomics of Parkinson’s Disease Human In Vitro Models Reveals Dopamine Neuron-Specific Stress Responses
Fernandes, Hugo J.R., Patikas, Nikolaos, Foskolou, Stefanie, Field, Sarah F., Park, Jong-Eun, Byrne, Meg L., Bassett, Andrew R., Metzakopian, Emmanouil
Published in Cell reports (Cambridge) (13.10.2020)
Published in Cell reports (Cambridge) (13.10.2020)
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Mono-Uridylation of Pre-MicroRNA as a Key Step in the Biogenesis of Group II let-7 MicroRNAs
Heo, Inha, Ha, Minju, Lim, Jaechul, Yoon, Mi-Jeong, Park, Jong-Eun, Kwon, S. Chul, Chang, Hyeshik, Kim, V. Narry
Published in Cell (26.10.2012)
Published in Cell (26.10.2012)
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Acoustofluidic lysis of cancer cells and Raman spectrum profiling
Nam, Hyeono, Park, Jong-Eun, Waheed, Waqas, Alazzam, Anas, Sung, Hyung Jin, Jeon, Jessie S
Published in Lab on a chip (13.09.2023)
Published in Lab on a chip (13.09.2023)
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Integrated scRNA-Seq Identifies Human Postnatal Thymus Seeding Progenitors and Regulatory Dynamics of Differentiating Immature Thymocytes
Lavaert, Marieke, Liang, Kai Ling, Vandamme, Niels, Park, Jong-Eun, Roels, Juliette, Kowalczyk, Monica S., Li, Bo, Ashenberg, Orr, Tabaka, Marcin, Dionne, Danielle, Tickle, Timothy L., Slyper, Michal, Rozenblatt-Rosen, Orit, Vandekerckhove, Bart, Leclercq, Georges, Regev, Aviv, Van Vlierberghe, Pieter, Guilliams, Martin, Teichmann, Sarah A., Saeys, Yvan, Taghon, Tom
Published in Immunity (Cambridge, Mass.) (16.06.2020)
Published in Immunity (Cambridge, Mass.) (16.06.2020)
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Journal Article
scLENS: data-driven signal detection for unbiased scRNA-seq data analysis
Kim, Hyun, Chang, Won, Chae, Seok Joo, Park, Jong-Eun, Seo, Minseok, Kim, Jae Kyoung
Published in Nature communications (27.04.2024)
Published in Nature communications (27.04.2024)
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Salivary gland organoid culture maintains distinct glandular properties of murine and human major salivary glands
Yoon, Yeo-Jun, Kim, Donghyun, Tak, Kwon Yong, Hwang, Seungyeon, Kim, Jisun, Sim, Nam Suk, Cho, Jae-Min, Choi, Dojin, Ji, Youngmi, Hur, Junho K., Kim, Hyunki, Park, Jong-Eun, Lim, Jae-Yol
Published in Nature communications (07.06.2022)
Published in Nature communications (07.06.2022)
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Recycling silver nanoparticle debris from laser ablation of silver nanowire in liquid media toward minimum material waste
Hwang, June Sik, Park, Jong-Eun, Kim, Gun Woo, Nam, Hyeono, Yu, Sangseok, Jeon, Jessie S., Kim, Sanha, Lee, Huseung, Yang, Minyang
Published in Scientific reports (26.01.2021)
Published in Scientific reports (26.01.2021)
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Robust temporal map of human in vitro myelopoiesis using single-cell genomics
Alsinet, Clara, Primo, Maria Nascimento, Lorenzi, Valentina, Bello, Erica, Kelava, Iva, Jones, Carla P., Vilarrasa-Blasi, Roser, Sancho-Serra, Carmen, Knights, Andrew J., Park, Jong-Eun, Wyspianska, Beata S., Trynka, Gosia, Tough, David F., Bassett, Andrew, Gaffney, Daniel J., Alvarez-Errico, Damiana, Vento-Tormo, Roser
Published in Nature communications (24.05.2022)
Published in Nature communications (24.05.2022)
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Inflammatory response in dairy cows caused by heat stress and biological mechanisms for maintaining homeostasis
Kim, Hana, Jo, Jang-Hoon, Lee, Hong-Gu, Park, Woncheoul, Lee, Hak-Kyo, Park, Jong-Eun, Shin, Donghyun
Published in PloS one (25.03.2024)
Published in PloS one (25.03.2024)
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Acetylcholinesterase and butyrylcholinesterase inhibitory activities of khellactone coumarin derivatives isolated from Peucedanum japonicum Thurnberg
Heo, Jeong Hyun, Eom, Bo Hyun, Ryu, Hyung Won, Kang, Myung-Gyun, Park, Jong Eun, Kim, Doo-Young, Kim, Jung-Hee, Park, Daeui, Oh, Sei-Ryang, Kim, Hoon
Published in Scientific reports (10.12.2020)
Published in Scientific reports (10.12.2020)
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Journal Article
A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer
Tian, Yuan, Simanshu, Dhirendra K., Ma, Jin-Biao, Park, Jong-Eun, Heo, Inha, Kim, V. Narry, Patel, Dinshaw J.
Published in Molecular cell (20.02.2014)
Published in Molecular cell (20.02.2014)
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