TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples
Li, Jiaming, Van Vranken, Jonathan G., Pontano Vaites, Laura, Schweppe, Devin K., Huttlin, Edward L., Etienne, Chris, Nandhikonda, Premchendar, Viner, Rosa, Robitaille, Aaron M., Thompson, Andrew H., Kuhn, Karsten, Pike, Ian, Bomgarden, Ryan D., Rogers, John C., Gygi, Steven P., Paulo, Joao A.
Published in Nature methods (01.04.2020)
Published in Nature methods (01.04.2020)
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Journal Article
A Role for the Mitochondrial Pyruvate Carrier as a Repressor of the Warburg Effect and Colon Cancer Cell Growth
Schell, John C., Olson, Kristofor A., Jiang, Lei, Hawkins, Amy J., Van Vranken, Jonathan G., Xie, Jianxin, Egnatchik, Robert A., Earl, Espen G., DeBerardinis, Ralph J., Rutter, Jared
Published in Molecular cell (06.11.2014)
Published in Molecular cell (06.11.2014)
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Journal Article
A proteome-wide atlas of drug mechanism of action
Mitchell, Dylan C., Kuljanin, Miljan, Li, Jiaming, Van Vranken, Jonathan G., Bulloch, Nathan, Schweppe, Devin K., Huttlin, Edward L., Gygi, Steven P.
Published in Nature biotechnology (01.06.2023)
Published in Nature biotechnology (01.06.2023)
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Journal Article
The mitochondrial acyl carrier protein (ACP) coordinates mitochondrial fatty acid synthesis with iron sulfur cluster biogenesis
Van Vranken, Jonathan G, Jeong, Mi-Young, Wei, Peng, Chen, Yu-Chan, Gygi, Steven P, Winge, Dennis R, Rutter, Jared
Published in eLife (19.08.2016)
Published in eLife (19.08.2016)
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Journal Article
Impact of Mitochondrial Fatty Acid Synthesis on Mitochondrial Biogenesis
Nowinski, Sara M., Van Vranken, Jonathan G., Dove, Katja K., Rutter, Jared
Published in Current biology (22.10.2018)
Published in Current biology (22.10.2018)
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Journal Article
A Mitochondrial Pyruvate Carrier Required for Pyruvate Uptake in Yeast, Drosophila, and Humans
Bricker, Daniel K., Taylor, Eric B., Schell, John C., Orsak, Thomas, Boutron, Audrey, Chen, Yu-Chan, Cox, James E., Cardon, Caleb M., Van Vranken, Jonathan G., Dephoure, Noah, Redin, Claire, Boudina, Sihem, Gygi, Steven P., Brivet, Michèle, Thummel, Carl S., Rutter, Jared
Published in Science (American Association for the Advancement of Science) (06.07.2012)
Published in Science (American Association for the Advancement of Science) (06.07.2012)
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Journal Article
Assessing target engagement using proteome-wide solvent shift assays
Van Vranken, Jonathan G, Li, Jiaming, Mitchell, Dylan C, Navarrete-Perea, José, Gygi, Steven P
Published in eLife (08.12.2021)
Published in eLife (08.12.2021)
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Journal Article
Phosphate starvation signaling increases mitochondrial membrane potential through respiration-independent mechanisms
Ouyang, Yeyun, Jeong, Mi-Young, Cunningham, Corey N, Berg, Jordan A, Toshniwal, Ashish G, Hughes, Casey E, Seiler, Kristina, Van Vranken, Jonathan G, Cluntun, Ahmad A, Lam, Geanette, Winter, Jacob M, Akdogan, Emel, Dove, Katja K, Nowinski, Sara M, West, Matthew, Odorizzi, Greg, Gygi, Steven P, Dunn, Cory D, Winge, Dennis R, Rutter, Jared
Published in eLife (22.01.2024)
Published in eLife (22.01.2024)
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Journal Article
Structure of human Fe–S assembly subcomplex reveals unexpected cysteine desulfurase architecture and acyl-ACP–ISD11 interactions
Cory, Seth A., Van Vranken, Jonathan G., Brignole, Edward J., Patra, Shachin, Winge, Dennis R., Drennan, Catherine L., Rutter, Jared, Barondeau, David P.
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
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Journal Article
Protein-mediated assembly of succinate dehydrogenase and its cofactors
Van Vranken, Jonathan G., Na, Un, Winge, Dennis R., Rutter, Jared
Published in Critical reviews in biochemistry and molecular biology (01.03.2015)
Published in Critical reviews in biochemistry and molecular biology (01.03.2015)
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Journal Article
Amelioration of pathologic α-synuclein-induced Parkinson's disease by irisin
Kam, Tae-In, Park, Hyejin, Chou, Shih-Ching, Van Vranken, Jonathan G, Mittenbühler, Melanie J, Kim, Hyeonwoo, A, Mu, Choi, Yu Ree, Biswas, Devanik, Wang, Justin, Shin, Yu, Loder, Alexis, Karuppagounder, Senthilkumar S, Wrann, Christiane D, Dawson, Valina L, Spiegelman, Bruce M, Dawson, Ted M
Published in Proceedings of the National Academy of Sciences - PNAS (06.09.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (06.09.2022)
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Journal Article
ACP Acylation Is an Acetyl-CoA-Dependent Modification Required for Electron Transport Chain Assembly
Van Vranken, Jonathan G., Nowinski, Sara M., Clowers, Katie J., Jeong, Mi-Young, Ouyang, Yeyun, Berg, Jordan A., Gygi, Jeremy P., Gygi, Steven P., Winge, Dennis R., Rutter, Jared
Published in Molecular cell (16.08.2018)
Published in Molecular cell (16.08.2018)
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Journal Article
Vms1p is a release factor for the ribosome-associated quality control complex
Zurita Rendón, Olga, Fredrickson, Eric K., Howard, Conor J., Van Vranken, Jonathan, Fogarty, Sarah, Tolley, Neal D., Kalia, Raghav, Osuna, Beatriz A., Shen, Peter S., Hill, Christopher P., Frost, Adam, Rutter, Jared
Published in Nature communications (06.06.2018)
Published in Nature communications (06.06.2018)
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Journal Article
Isolation of extracellular fluids reveals novel secreted bioactive proteins from muscle and fat tissues
Mittenbühler, Melanie J., Jedrychowski, Mark P., Van Vranken, Jonathan G., Sprenger, Hans-Georg, Wilensky, Sarah, Dumesic, Phillip A., Sun, Yizhi, Tartaglia, Andrea, Bogoslavski, Dina, A, Mu, Xiao, Haopeng, Blackmore, Katherine A., Reddy, Anita, Gygi, Steven P., Chouchani, Edward T., Spiegelman, Bruce M.
Published in Cell metabolism (07.03.2023)
Published in Cell metabolism (07.03.2023)
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Journal Article
Insulin sensitization by small molecules enhancing GLUT4 translocation
Yin, Terry C, Van Vranken, Jonathan G, Srivastava, Dhiraj, Mittal, Ayushi, Buscaglia, Paul, Moore, Autumn E, Verdinez, Jissele A, Graham, Aschleigh E, Walsh, Susan A, Acevedo, Michael A, Kerns, Robert J, Artemyev, Nikolai O, Gygi, Steven P, Sebag, Julien A
Published in Cell chemical biology (17.08.2023)
Published in Cell chemical biology (17.08.2023)
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Journal Article
Large-scale characterization of drug mechanism of action using proteome-wide thermal shift assays
Van Vranken, Jonathan G, Li, Jiaming, Mintseris, Julian, Wei, Ting-Yu, Sniezek, Catherine M, Gadzuk-Shea, Meagan, Gygi, Steven P, Schweppe, Devin K
Published in eLife (11.11.2024)
Published in eLife (11.11.2024)
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