Global Mapping of Herpesvirus-Host Protein Complexes Reveals a Transcription Strategy for Late Genes
Davis, Zoe H., Verschueren, Erik, Jang, Gwendolyn M., Kleffman, Kevin, Johnson, Jeffrey R., Park, Jimin, Von Dollen, John, Maher, M. Cyrus, Johnson, Tasha, Newton, William, Jäger, Stefanie, Shales, Michael, Horner, Julie, Hernandez, Ryan D., Krogan, Nevan J., Glaunsinger, Britt A.
Published in Molecular cell (22.01.2015)
Published in Molecular cell (22.01.2015)
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Journal Article
Suppression of C9orf72 RNA repeat-induced neurotoxicity by the ALS-associated RNA-binding protein Zfp106
Celona, Barbara, Dollen, John von, Vatsavayai, Sarat C, Kashima, Risa, Johnson, Jeffrey R, Tang, Amy A, Hata, Akiko, Miller, Bruce L, Huang, Eric J, Krogan, Nevan J, Seeley, William W, Black, Brian L
Published in eLife (10.01.2017)
Published in eLife (10.01.2017)
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Journal Article
Chlamydia interfere with an interaction between the mannose-6-phosphate receptor and sorting nexins to counteract host restriction
Elwell, Cherilyn A, Czudnochowski, Nadine, von Dollen, John, Johnson, Jeffrey R, Nakagawa, Rachel, Mirrashidi, Kathleen, Krogan, Nevan J, Engel, Joanne N, Rosenberg, Oren S
Published in eLife (02.03.2017)
Published in eLife (02.03.2017)
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Journal Article
Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis
Shah, Priya S., Link, Nichole, Jang, Gwendolyn M., Sharp, Phillip P., Zhu, Tongtong, Swaney, Danielle L., Johnson, Jeffrey R., Von Dollen, John, Ramage, Holly R., Satkamp, Laura, Newton, Billy, Hüttenhain, Ruth, Petit, Marine J., Baum, Tierney, Everitt, Amanda, Laufman, Orly, Tassetto, Michel, Shales, Michael, Stevenson, Erica, Iglesias, Gabriel N., Shokat, Leila, Tripathi, Shashank, Balasubramaniam, Vinod, Webb, Laurence G., Aguirre, Sebastian, Willsey, A. Jeremy, Garcia-Sastre, Adolfo, Pollard, Katherine S., Cherry, Sara, Gamarnik, Andrea V., Marazzi, Ivan, Taunton, Jack, Fernandez-Sesma, Ana, Bellen, Hugo J., Andino, Raul, Krogan, Nevan J.
Published in Cell (13.12.2018)
Published in Cell (13.12.2018)
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Journal Article
Protein Interaction Mapping Identifies RBBP6 as a Negative Regulator of Ebola Virus Replication
Batra, Jyoti, Hultquist, Judd F., Liu, Dandan, Shtanko, Olena, Von Dollen, John, Satkamp, Laura, Jang, Gwendolyn M., Luthra, Priya, Schwarz, Toni M., Small, Gabriel I., Arnett, Eusondia, Anantpadma, Manu, Reyes, Ann, Leung, Daisy W., Kaake, Robyn, Haas, Paige, Schmidt, Carson B., Schlesinger, Larry S., LaCount, Douglas J., Davey, Robert A., Amarasinghe, Gaya K., Basler, Christopher F., Krogan, Nevan J.
Published in Cell (13.12.2018)
Published in Cell (13.12.2018)
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Journal Article
A Combined Proteomics/Genomics Approach Links Hepatitis C Virus Infection with Nonsense-Mediated mRNA Decay
Ramage, Holly R., Kumar, G. Renuka, Verschueren, Erik, Johnson, Jeffrey R., Von Dollen, John, Johnson, Tasha, Newton, Billy, Shah, Priya, Horner, Julie, Krogan, Nevan J., Ott, Melanie
Published in Molecular cell (22.01.2015)
Published in Molecular cell (22.01.2015)
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Journal Article
Global Mapping of the Inc-Human Interactome Reveals that Retromer Restricts Chlamydia Infection
Mirrashidi, Kathleen M., Elwell, Cherilyn A., Verschueren, Erik, Johnson, Jeffrey R., Frando, Andrew, Von Dollen, John, Rosenberg, Oren, Gulbahce, Natali, Jang, Gwendolyn, Johnson, Tasha, Jäger, Stefanie, Gopalakrishnan, Anusha M., Sherry, Jessica, Dunn, Joe Dan, Olive, Andrew, Penn, Bennett, Shales, Michael, Cox, Jeffery S., Starnbach, Michael N., Derre, Isabelle, Valdivia, Raphael, Krogan, Nevan J., Engel, Joanne
Published in Cell host & microbe (08.07.2015)
Published in Cell host & microbe (08.07.2015)
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Journal Article
An Mtb-Human Protein-Protein Interaction Map Identifies a Switch between Host Antiviral and Antibacterial Responses
Penn, Bennett H., Netter, Zoe, Johnson, Jeffrey R., Von Dollen, John, Jang, Gwendolyn M., Johnson, Tasha, Ohol, Yamini M., Maher, Cyrus, Bell, Samantha L., Geiger, Kristina, Golovkine, Guillaume, Du, Xiaotang, Choi, Alex, Parry, Trevor, Mohapatra, Bhopal C., Storck, Matthew D., Band, Hamid, Chen, Chen, Jäger, Stefanie, Shales, Michael, Portnoy, Dan A., Hernandez, Ryan, Coscoy, Laurent, Cox, Jeffery S., Krogan, Nevan J.
Published in Molecular cell (16.08.2018)
Published in Molecular cell (16.08.2018)
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Journal Article
A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity
Swaney, Danielle L, Ramms, Dana J, Wang, Zhiyong, Park, Jisoo, Goto, Yusuke, Soucheray, Margaret, Bhola, Neil, Kim, Kyumin, Zheng, Fan, Zeng, Yan, McGregor, Michael, Herrington, Kari A, O'Keefe, Rachel, Jin, Nan, VanLandingham, Nathan K, Foussard, Helene, Von Dollen, John, Bouhaddou, Mehdi, Jimenez-Morales, David, Obernier, Kirsten, Kreisberg, Jason F, Kim, Minkyu, Johnson, Daniel E, Jura, Natalia, Grandis, Jennifer R, Gutkind, J Silvio, Ideker, Trey, Krogan, Nevan J
Published in Science (American Association for the Advancement of Science) (01.10.2021)
Published in Science (American Association for the Advancement of Science) (01.10.2021)
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Journal Article
PEAK3/C19orf35 pseudokinase, a new NFK3 kinase family member, inhibits CrkII through dimerization
Lopez, Mitchell L., Lo, Megan, Kung, Jennifer E., Dudkiewicz, Małgorzata, Jang, Gwendolyn M., Von Dollen, John, Johnson, Jeffrey R., Krogan, Nevan J., Pawłowski, Krzysztof, Jura, Natalia
Published in Proceedings of the National Academy of Sciences - PNAS (30.07.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (30.07.2019)
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Journal Article
Multiple Routes to Oncogenesis Are Promoted by the Human Papillomavirus-Host Protein Network
Eckhardt, Manon, Zhang, Wei, Gross, Andrew M, Von Dollen, John, Johnson, Jeffrey R, Franks-Skiba, Kathleen E, Swaney, Danielle L, Johnson, Tasha L, Jang, Gwendolyn M, Shah, Priya S, Brand, Toni M, Archambault, Jacques, Kreisberg, Jason F, Grandis, Jennifer R, Ideker, Trey, Krogan, Nevan J
Published in Cancer discovery (01.11.2018)
Published in Cancer discovery (01.11.2018)
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Journal Article
Identification of antiviral roles for the exon–junction complex and nonsense-mediated decay in flaviviral infection
Li, Minghua, Johnson, Jeffrey R., Truong, Billy, Kim, Grace, Weinbren, Nathan, Dittmar, Mark, Shah, Priya S., Von Dollen, John, Newton, Billy W., Jang, Gwendolyn M., Krogan, Nevan J., Cherry, Sara, Ramage, Holly
Published in Nature microbiology (01.06.2019)
Published in Nature microbiology (01.06.2019)
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Journal Article
Spatial control of sensory adaptation modulates mechanosensing in Pseudomonas aeruginosa
Patino, Ramiro, Kühn, Marco J, Macmillan, Henriette, Inclan, Yuki F, Chavez, Ivan, Von Dollen, John, Johnson, Jeffrey R, Swaney, Danielle L, Krogan, Nevan J, Persat, Alexandre, Engel, Joanne N
Published in bioRxiv : the preprint server for biology (27.02.2024)
Published in bioRxiv : the preprint server for biology (27.02.2024)
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Journal Article
A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa
Inclan, Yuki F., Persat, Alexandre, Greninger, Alexander, Von Dollen, John, Johnson, Jeffery, Krogan, Nevan, Gitai, Zemer, Engel, Joanne N.
Published in Molecular microbiology (01.08.2016)
Published in Molecular microbiology (01.08.2016)
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Journal Article
Characterization of an A3G-VifHIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host–Pathogen Complexes
Kaake, Robyn M., Echeverria, Ignacia, Kim, Seung Joong, Von Dollen, John, Chesarino, Nicholas M., Feng, Yuqing, Yu, Clinton, Ta, Hai, Chelico, Linda, Huang, Lan, Gross, John, Sali, Andrej, Krogan, Nevan J.
Published in Molecular & cellular proteomics (2021)
Published in Molecular & cellular proteomics (2021)
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The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity
Stormo, Adrienne E D, Shavarebi, Farbod, FitzGibbon, Molly, Earley, Elizabeth M, Ahrendt, Hannah, Lum, Lotus S, Verschueren, Erik, Swaney, Danielle L, Skibinski, Gaia, Ravisankar, Abinaya, van Haren, Jeffrey, Davis, Emily J, Johnson, Jeffrey R, Von Dollen, John, Balen, Carson, Porath, Jacob, Crosio, Claudia, Mirescu, Christian, Iaccarino, Ciro, Dauer, William T, Nichols, R Jeremy, Wittmann, Torsten, Cox, Timothy C, Finkbeiner, Steve, Krogan, Nevan J, Oakes, Scott A, Hiniker, Annie
Published in The Journal of cell biology (04.04.2022)
Published in The Journal of cell biology (04.04.2022)
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Abstract 4891: Hepatitis B virus remodels host protein interaction networks to generate distinct cellular dependencies
Gordan, John D., Pitea, Adriana, Eckhardt, Manon, Jang, Gwendolyn, Turnham, Rigney E., Choi, Alex L M., Von Dollen, John, Lim, Huat C., Thayer, Elizabeth F., Kelley, R. Katie, Swaney, Danielle L., Zhang, Wei, Theis, Fabian J., Ideker, Trey, Krogan, Nevan J.
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Abstract 3297: A tyrosine kinase interactome reveals network states that guide the use of targeted therapies in cancer
Kaushik, Swati, Jang, Gwendolyn, Hu, Hsien-Ming, Shah, Khyati, Zhao, Xin, Jascur, John, Dollen, John Von, Verschueren, Erik, Johnson, Jeffrey, Krogan, Nevan, Bandyopadhyay, Sourav
Published in Cancer research (Chicago, Ill.) (01.07.2018)
Published in Cancer research (Chicago, Ill.) (01.07.2018)
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Journal Article
An Mtb-Human Protein-Protein Interaction Map Identifies a Switch Between Host Anti-Viral and Anti-Bacterial Responses
Penn, Bennett H., Netter, Zoe, Johnson, Jeffrey R., Von Dollen, John, Jang, Gwendolyn M., Johnson, Tasha, Ohol, Yamini M., Maher, Cyrus, Bell, Samantha L, Geiger, Kristina, Golovkine, Guillaume, Du, Xiaotang, Choi, Alex, Parry, Trevor, Mohapatra, Bhopal C., Storck, Matthew D., Band, Hamid, Chen, Chen, Jäger, Stefanie, Shales, Michael, Portnoy, Dan A., Hernandez, Ryan, Coscoy, Laurent, Cox, Jeffery S., Krogan, Nevan J.
Published in Molecular cell (16.08.2018)
Published in Molecular cell (16.08.2018)
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