The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans
Tully, Benjamin J., Graham, Elaina D., Heidelberg, John F.
Published in Scientific data (16.01.2018)
Published in Scientific data (16.01.2018)
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Activity of abundant and rare bacteria in a coastal ocean
Campbell, Barbara J, Yu, Liying, Heidelberg, John F, Kirchman, David L
Published in Proceedings of the National Academy of Sciences - PNAS (02.08.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (02.08.2011)
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Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments
Tully, Benjamin J, Heidelberg, John F
Published in Applied and environmental microbiology (15.07.2016)
Published in Applied and environmental microbiology (15.07.2016)
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Identification of a Conserved Bacterial Protein Secretion System in Vibrio cholerae Using the Dictyostelium Host Model System
Pukatzki, Stefan, Ma, Amy T., Sturtevant, Derek, Krastins, Bryan, Sarracino, David, Nelson, William C., Heidelberg, John F., Mekalanos, John J.
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2006)
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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific
Rusch, Douglas B, Halpern, Aaron L, Sutton, Granger, Heidelberg, Karla B, Williamson, Shannon, Yooseph, Shibu, Wu, Dongying, Eisen, Jonathan A, Hoffman, Jeff M, Remington, Karin, Beeson, Karen, Tran, Bao, Smith, Hamilton, Baden-Tillson, Holly, Stewart, Clare, Thorpe, Joyce, Freeman, Jason, Andrews-Pfannkoch, Cynthia, Venter, Joseph E, Li, Kelvin, Kravitz, Saul, Heidelberg, John F, Utterback, Terry, Rogers, Yu-Hui, Falcón, Luisa I, Souza, Valeria, Bonilla-Rosso, Germán, Eguiarte, Luis E, Karl, David M, Sathyendranath, Shubha, Platt, Trevor, Bermingham, Eldredge, Gallardo, Victor, Tamayo-Castillo, Giselle, Ferrari, Michael R, Strausberg, Robert L, Nealson, Kenneth, Friedman, Robert, Frazier, Marvin, Venter, J Craig
Published in PLoS biology (01.03.2007)
Published in PLoS biology (01.03.2007)
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Mariprofundus ferrooxydans PV-1 the first genome of a marine Fe(II) oxidizing Zetaproteobacterium
Singer, Esther, Emerson, David, Webb, Eric A, Barco, Roman A, Kuenen, J Gijs, Nelson, William C, Chan, Clara S, Comolli, Luis R, Ferriera, Steve, Johnson, Justin, Heidelberg, John F, Edwards, Katrina J
Published in PloS one (23.09.2011)
Published in PloS one (23.09.2011)
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290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology
Tully, Benjamin J, Sachdeva, Rohan, Graham, Elaina D, Heidelberg, John F
Published in PeerJ (San Francisco, CA) (10.07.2017)
Published in PeerJ (San Francisco, CA) (10.07.2017)
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Metagenomic analysis of a complex marine planktonic thaumarchaeal community from the Gulf of Maine
Tully, Benjamin J., Nelson, William C., Heidelberg, John F.
Published in Environmental microbiology (01.01.2012)
Published in Environmental microbiology (01.01.2012)
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Vertical distribution of picoeukaryotic diversity in the Sargasso Sea
Not, Fabrice, Gausling, Rudolf, Azam, Farooq, Heidelberg, John F, Worden, Alexandra Z
Published in Environmental microbiology (01.05.2007)
Published in Environmental microbiology (01.05.2007)
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Environmental Genome Shotgun Sequencing of the Sargasso Sea
Venter, J. Craig, Remington, Karin, Heidelberg, John F., Halpern, Aaron L., Rusch, Doug, Eisen, Jonathan A., Wu, Dongying, Paulsen, Ian, Nelson, Karen E., Nelson, William, Fouts, Derrick E., Levy, Samuel, Knap, Anthony H., Lomas, Michael W., Nealson, Ken, White, Owen, Peterson, Jeremy, Hoffman, Jeff, Parsons, Rachel, Baden-Tillson, Holly, Pfannkoch, Cynthia, Rogers, Yu-Hui, Smith, Hamilton O.
Published in Science (American Association for the Advancement of Science) (02.04.2004)
Published in Science (American Association for the Advancement of Science) (02.04.2004)
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Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle
Walworth, Nathan, Pfreundt, Ulrike, Nelson, William C, Mincer, Tracy, Heidelberg, John F, Fu, Feixue, Waterbury, John B, Glavina del Rio, Tijana, Goodwin, Lynne, Kyrpides, Nikos C, Land, Miriam L, Woyke, Tanja, Hutchins, David A, Hess, Wolfgang R, Webb, Eric A
Published in Proceedings of the National Academy of Sciences - PNAS (07.04.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (07.04.2015)
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The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough
Heidelberg, John F, Seshadri, Rekha, Haveman, Shelley A, Hemme, Christopher L, Paulsen, Ian T, Kolonay, James F, Eisen, Jonathan A, Ward, Naomi, Methe, Barbara, Brinkac, Lauren M, Daugherty, Sean C, Deboy, Robert T, Dodson, Robert J, Durkin, A Scott, Madupu, Ramana, Nelson, William C, Sullivan, Steven A, Fouts, Derrick, Haft, Daniel H, Selengut, Jeremy, Peterson, Jeremy D, Davidsen, Tanja M, Zafar, Nikhat, Zhou, Liwei, Radune, Diana, Dimitrov, George, Hance, Mark, Tran, Kevin, Khouri, Hoda, Gill, John, Utterback, Terry R, Feldblyum, Tamara V, Wall, Judy D, Voordouw, Gerrit, Fraser, Claire M
Published in Nature biotechnology (01.05.2004)
Published in Nature biotechnology (01.05.2004)
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Genome Sequence of Synechococcus CC9311: Insights into Adaptation to a Coastal Environment
Palenik, Brian, Ren, Qinghu, Dupont, Chris L., Myers, Garry S., Heidelberg, John F., Badger, Jonathan H., Madupu, Ramana, Nelson, William C., Brinkac, Lauren M., Dodson, Robert J., Durkin, A. Scott, Daugherty, Sean C., Sullivan, Stephen A., Khouri, Hoda, Mohamoud, Yasmin, Halpin, Rebecca, Paulsen, Ian T.
Published in Proceedings of the National Academy of Sciences - PNAS (05.09.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (05.09.2006)
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Comparative Genomic Analysis of Vibrio cholerae: Genes That Correlate with Cholera Endemic and Pandemic Disease
Dziejman, Michelle, Balon, Emmy, Boyd, Dana, Fraser, Clare M., Heidelberg, John F., Mekalanos, John J.
Published in Proceedings of the National Academy of Sciences - PNAS (05.02.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (05.02.2002)
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Analysis of Insertion Sequences in Thermophilic Cyanobacteria: Exploring the Mechanisms of Establishing, Maintaining, and Withstanding High Insertion Sequence Abundance
NELSON, William C, WOLLERMAN, Lori, BHAYA, Devaki, HEIDELBERG, John F
Published in Applied and Environmental Microbiology (01.08.2011)
Published in Applied and Environmental Microbiology (01.08.2011)
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