dmGWAS: dense module searching for genome-wide association studies in protein-protein interaction networks
Jia, Peilin, Zheng, Siyuan, Long, Jirong, Zheng, Wei, Zhao, Zhongming
Published in Bioinformatics (01.01.2011)
Published in Bioinformatics (01.01.2011)
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Prospective study of oral microbiome and colorectal cancer risk in low‐income and African American populations
Yang, Yaohua, Cai, Qiuyin, Shu, Xiao‐Ou, Steinwandel, Mark D., Blot, William J., Zheng, Wei, Long, Jirong
Published in International journal of cancer (15.05.2019)
Published in International journal of cancer (15.05.2019)
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Journal Article
Exome sequencing generates high quality data in non-target regions
Guo, Yan, Long, Jirong, He, Jing, Li, Chung-I, Cai, Qiuyin, Shu, Xiao-Ou, Zheng, Wei, Li, Chun
Published in BMC genomics (20.05.2012)
Published in BMC genomics (20.05.2012)
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Journal Article
The effect of strand bias in Illumina short-read sequencing data
Guo, Yan, Li, Jiang, Li, Chung-I, Long, Jirong, Samuels, David C, Shyr, Yu
Published in BMC genomics (24.11.2012)
Published in BMC genomics (24.11.2012)
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Genomic Characterization of Esophageal Squamous Cell Carcinoma Reveals Critical Genes Underlying Tumorigenesis and Poor Prognosis
Qin, Hai-De, Liao, Xiao-Yu, Chen, Yuan-Bin, Huang, Shao-Yi, Xue, Wen-Qiong, Li, Fang-Fang, Ge, Xiao-Song, Liu, De-Qing, Cai, Qiuyin, Long, Jirong, Li, Xi-Zhao, Hu, Ye-Zhu, Zhang, Shao-Dan, Zhang, Lan-Jun, Lehrman, Benjamin, Scott, Alan F., Lin, Dongxin, Zeng, Yi-Xin, Shugart, Yin Yao, Jia, Wei-Hua
Published in American journal of human genetics (07.04.2016)
Published in American journal of human genetics (07.04.2016)
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Journal Article
The Circadian Rhythm Gene Arntl2 Is a Metastasis Susceptibility Gene for Estrogen Receptor-Negative Breast Cancer
Ha, Ngoc-Han, Long, Jirong, Cai, Qiuyin, Shu, Xiao Ou, Hunter, Kent W
Published in PLoS genetics (22.09.2016)
Published in PLoS genetics (22.09.2016)
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Journal Article
Genome-wide association study identifies a new breast cancer susceptibility locus at 6q25.1
Zheng, Wei, Li, Chun, Fair, Alecia Malin, Lu, Wei, Levy, Shawn, Wen, Wanqing, Long, Jirong, Zheng, Ying, Deming, Sandra L, Cai, Qiuyin, Xiang, Yong-Bin, Shu, Xiao-Ou, Gao, Yu-Tang, Haines, Jonathan L, Gu, Kai
Published in Nature genetics (01.03.2009)
Published in Nature genetics (01.03.2009)
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Journal Article
A Common Deletion in the APOBEC3 Genes and Breast Cancer Risk
JIRONG LONG, DELAHANTY, Ryan J, ALI, Simak, SHU, Xiao-Ou, WEI ZHENG, GUOLIANG LI, GAO, Yu-Tang, WEI LU, QIUYIN CAI, XIANG, Yong-Bing, CHUN LI, JI, Bu-Tian, YING ZHENG
Published in JNCI : Journal of the National Cancer Institute (17.04.2013)
Published in JNCI : Journal of the National Cancer Institute (17.04.2013)
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Integrative genomic analyses of APOBEC-mutational signature, expression and germline deletion of APOBEC3 genes, and immunogenicity in multiple cancer types
Chen, Zhishan, Wen, Wanqing, Bao, Jiandong, Kuhs, Krystle L, Cai, Qiuyin, Long, Jirong, Shu, Xiao-Ou, Zheng, Wei, Guo, Xingyi
Published in BMC medical genomics (18.09.2019)
Published in BMC medical genomics (18.09.2019)
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Integrating muti-omics data to identify tissue-specific DNA methylation biomarkers for cancer risk
Yang, Yaohua, Chen, Yaxin, Xu, Shuai, Guo, Xingyi, Jia, Guochong, Ping, Jie, Shu, Xiang, Zhao, Tianying, Yuan, Fangcheng, Wang, Gang, Xie, Yufang, Ci, Hang, Liu, Hongmo, Qi, Yawen, Liu, Yongjun, Liu, Dan, Li, Weimin, Ye, Fei, Shu, Xiao-Ou, Zheng, Wei, Li, Li, Cai, Qiuyin, Long, Jirong
Published in Nature communications (18.07.2024)
Published in Nature communications (18.07.2024)
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Journal Article
Cigarette smoking and oral microbiota in low-income and African-American populations
Yang, Yaohua, Zheng, Wei, Cai, Qiu-Yin, Shrubsole, Martha J, Pei, Zhiheng, Brucker, Robert, Steinwandel, Mark D, Bordenstein, Seth R, Li, Zhigang, Blot, William J, Shu, Xiao-Ou, Long, Jirong
Published in Journal of epidemiology and community health (1979) (01.12.2019)
Published in Journal of epidemiology and community health (1979) (01.12.2019)
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Identification of candidate DNA methylation biomarkers related to Alzheimer’s disease risk by integrating genome and blood methylome data
Sun, Yanfa, Zhu, Jingjing, Yang, Yaohua, Zhang, Zichen, Zhong, Hua, Zeng, Guanghua, Zhou, Dan, Nowakowski, Richard S., Long, Jirong, Wu, Chong, Wu, Lang
Published in Translational psychiatry (13.12.2023)
Published in Translational psychiatry (13.12.2023)
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From tobacco smoking to cancer mutational signature: a mediation analysis strategy to explore the role of epigenetic changes
Chen, Zhishan, Wen, Wanqing, Cai, Qiuyin, Long, Jirong, Wang, Ying, Lin, Weiqiang, Shu, Xiao-Ou, Zheng, Wei, Guo, Xingyi
Published in BMC cancer (14.09.2020)
Published in BMC cancer (14.09.2020)
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Using genome and transcriptome data from African-ancestry female participants to identify putative breast cancer susceptibility genes
Ping, Jie, Jia, Guochong, Cai, Qiuyin, Guo, Xingyi, Tao, Ran, Ambrosone, Christine, Huo, Dezheng, Ambs, Stefan, Barnard, Mollie E., Chen, Yu, Garcia-Closas, Montserrat, Gu, Jian, Hu, Jennifer J., John, Esther M., Li, Christopher I., Nathanson, Katherine, Nemesure, Barbara, Olopade, Olufunmilayo I., Pal, Tuya, Press, Michael F., Sanderson, Maureen, Sandler, Dale P., Yoshimatsu, Toshio, Adejumo, Prisca O., Ahearn, Thomas, Brewster, Abenaa M., Hennis, Anselm J. M., Makumbi, Timothy, Ndom, Paul, O’Brien, Katie M., Olshan, Andrew F., Oluwasanu, Mojisola M., Reid, Sonya, Yao, Song, Butler, Ebonee N., Huang, Maosheng, Ntekim, Atara, Li, Bingshan, Troester, Melissa A., Palmer, Julie R., Haiman, Christopher A., Long, Jirong, Zheng, Wei
Published in Nature communications (02.05.2024)
Published in Nature communications (02.05.2024)
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Journal Article
Use of deep whole-genome sequencing data to identify structure risk variants in breast cancer susceptibility genes
Guo, Xingyi, Shi, Jiajun, Cai, Qiuyin, Shu, Xiao-Ou, He, Jing, Wen, Wanqing, Allen, Jamie, Pharoah, Paul, Dunning, Alison, Hunter, David J, Kraft, Peter, Easton, Douglas F, Zheng, Wei, Long, Jirong
Published in Human molecular genetics (01.03.2018)
Published in Human molecular genetics (01.03.2018)
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Incorporating European GWAS findings improve polygenic risk prediction accuracy of breast cancer among East Asians
Ji, Ying, Long, Jirong, Kweon, Sun‐Seog, Kang, Daehee, Kubo, Michiaki, Park, Boyoung, Shu, Xiao‐Ou, Zheng, Wei, Tao, Ran, Li, Bingshan
Published in Genetic epidemiology (01.07.2021)
Published in Genetic epidemiology (01.07.2021)
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