Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experiment
Hughes, Jim R, Roberts, Nigel, McGowan, Simon, Hay, Deborah, Giannoulatou, Eleni, Lynch, Magnus, De Gobbi, Marco, Taylor, Stephen, Gibbons, Richard, Higgs, Douglas R
Published in Nature genetics (01.02.2014)
Published in Nature genetics (01.02.2014)
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Journal Article
Identification of LZTFL1 as a candidate effector gene at a COVID-19 risk locus
Downes, Damien J, Cross, Amy R, Hua, Peng, Roberts, Nigel, Schwessinger, Ron, Cutler, Antony J, Munis, Altar M, Brown, Jill, Mielczarek, Olga, de Andrea, Carlos E, Melero, Ignacio, Gill, Deborah R, Hyde, Stephen C, Knight, Julian C, Todd, John A, Sansom, Stephen N, Issa, Fadi, Davies, James O J, Hughes, Jim R
Published in Nature genetics (01.11.2021)
Published in Nature genetics (01.11.2021)
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Journal Article
Multiplexed analysis of chromosome conformation at vastly improved sensitivity
Davies, James O J, Telenius, Jelena M, McGowan, Simon J, Roberts, Nigel A, Taylor, Stephen, Higgs, Douglas R, Hughes, Jim R
Published in Nature methods (01.01.2016)
Published in Nature methods (01.01.2016)
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Journal Article
Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo
Hanssen, Lars L P, Kassouf, Mira T, Oudelaar, A Marieke, Biggs, Daniel, Preece, Chris, Downes, Damien J, Gosden, Matthew, Sharpe, Jacqueline A, Sloane-Stanley, Jacqueline A, Hughes, Jim R, Davies, Benjamin, Higgs, Douglas R
Published in Nature cell biology (01.08.2017)
Published in Nature cell biology (01.08.2017)
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Journal Article
Unlinking an lncRNA from Its Associated cis Element
Paralkar, Vikram R., Taborda, Cristian C., Huang, Peng, Yao, Yu, Kossenkov, Andrew V., Prasad, Rishi, Luan, Jing, Davies, James O.J., Hughes, Jim R., Hardison, Ross C., Blobel, Gerd A., Weiss, Mitchell J.
Published in Molecular cell (07.04.2016)
Published in Molecular cell (07.04.2016)
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Journal Article
Chromatin interaction maps identify Wnt responsive cis-regulatory elements coordinating Paupar-Pax6 expression in neuronal cells
Pavlaki, Ioanna, Shapiro, Michael, Pisignano, Giuseppina, Jones, Stephanie M E, Telenius, Jelena, Muñoz-Descalzo, Silvia, Williams, Robert J, Hughes, Jim R, Vance, Keith W
Published in PLoS genetics (01.06.2022)
Published in PLoS genetics (01.06.2022)
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Journal Article
ATRX plays a key role in maintaining silencing at interstitial heterochromatic loci and imprinted genes
Voon, Hsiao P.J, Hughes, Jim R., Rode, Christina, De La Rosa-Velázquez, Inti A., Jenuwein, Thomas, Feil, Robert, Higgs, Douglas R., Gibbons, Richard J.
Published in Cell reports (Cambridge) (21.04.2015)
Published in Cell reports (Cambridge) (21.04.2015)
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Journal Article
DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation
Godfrey, Laura, Crump, Nicholas T, Thorne, Ross, Lau, I-Jun, Repapi, Emmanouela, Dimou, Dimitra, Smith, Alastair L, Harman, Joe R, Telenius, Jelena M, Oudelaar, A Marieke, Downes, Damien J, Vyas, Paresh, Hughes, Jim R, Milne, Thomas A
Published in Nature communications (26.06.2019)
Published in Nature communications (26.06.2019)
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Journal Article
Dynamics of the 4D genome during in vivo lineage specification and differentiation
Oudelaar, A Marieke, Beagrie, Robert A, Gosden, Matthew, de Ornellas, Sara, Georgiades, Emily, Kerry, Jon, Hidalgo, Daniel, Carrelha, Joana, Shivalingam, Arun, El-Sagheer, Afaf H, Telenius, Jelena M, Brown, Tom, Buckle, Veronica J, Socolovsky, Merav, Higgs, Douglas R, Hughes, Jim R
Published in Nature communications (01.06.2020)
Published in Nature communications (01.06.2020)
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Journal Article
Loss of Extreme Long-Range Enhancers in Human Neural Crest Drives a Craniofacial Disorder
Long, Hannah K., Osterwalder, Marco, Welsh, Ian C., Hansen, Karissa, Davies, James O.J., Liu, Yiran E., Koska, Mervenaz, Adams, Alexander T., Aho, Robert, Arora, Neha, Ikeda, Kazuya, Williams, Ruth M., Sauka-Spengler, Tatjana, Porteus, Matthew H., Mohun, Tim, Dickel, Diane E., Swigut, Tomek, Hughes, Jim R., Higgs, Douglas R., Visel, Axel, Selleri, Licia, Wysocka, Joanna
Published in Cell stem cell (05.11.2020)
Published in Cell stem cell (05.11.2020)
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Journal Article
Comparative analysis of three-dimensional chromosomal architecture identifies a novel fetal hemoglobin regulatory element
Huang, Peng, Keller, Cheryl A, Giardine, Belinda, Grevet, Jeremy D, Davies, James O J, Hughes, Jim R, Kurita, Ryo, Nakamura, Yukio, Hardison, Ross C, Blobel, Gerd A
Published in Genes & development (15.08.2017)
Published in Genes & development (15.08.2017)
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