Search Results - "Jianlin, Cheng" :: K.UTB vyhledávací portál | TBU Library Retrieval Portal

3Drefine: an interactive web server for efficient protein structure refinement

3Drefine: an interactive web server for efficient protein structure refinement

by Bhattacharya, Debswapna, Nowotny, Jackson, Cao, Renzhi, Cheng, Jianlin
Published in Nucleic acids research (08.07.2016)

Get full text

Journal Article

Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13

Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13

by Hou, Jie, Wu, Tianqi, Cao, Renzhi, Cheng, Jianlin
Published in Proteins, structure, function, and bioinformatics (01.12.2019)

Get full text

Journal Article

DeepSF: deep convolutional neural network for mapping protein sequences to folds

DeepSF: deep convolutional neural network for mapping protein sequences to folds

by Hou, Jie, Adhikari, Badri, Cheng, Jianlin
Published in Bioinformatics (15.04.2018)

Get full text

Journal Article

CONFOLD2: improved contact-driven ab initio protein structure modeling

CONFOLD2: improved contact-driven ab initio protein structure modeling

by Adhikari, Badri, Cheng, Jianlin
Published in BMC bioinformatics (25.01.2018)

Get full text

Journal Article

De novo atomic protein structure modeling for cryoEM density maps using 3D transformer and HMM

De novo atomic protein structure modeling for cryoEM density maps using 3D transformer and HMM

by Giri, Nabin, Cheng, Jianlin
Published in Nature communications (29.06.2024)

Get full text

Journal Article

3Drefine: Consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization

3Drefine: Consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization

by Bhattacharya, Debswapna, Cheng, Jianlin
Published in Proteins, structure, function, and bioinformatics (01.01.2013)

Get full text

Journal Article

Predicting protein residue―residue contacts using deep networks and boosting

Predicting protein residue―residue contacts using deep networks and boosting

by EICKHOLT, Jesse, JIANLIN CHENG
Published in Bioinformatics (01.12.2012)

Get full text

Journal Article

DeepDist: real-value inter-residue distance prediction with deep residual convolutional network

DeepDist: real-value inter-residue distance prediction with deep residual convolutional network

by Wu, Tianqi, Guo, Zhiye, Hou, Jie, Cheng, Jianlin
Published in BMC bioinformatics (25.01.2021)

Get full text

Journal Article

Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data Analysis

Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data Analysis

by Chen, Chen, Hou, Jie, Tanner, John J, Cheng, Jianlin
Published in International journal of molecular sciences (20.04.2020)

Get full text

Journal Article

Prediction of inter-chain distance maps of protein complexes with 2D attention-based deep neural networks

Prediction of inter-chain distance maps of protein complexes with 2D attention-based deep neural networks

by Guo, Zhiye, Liu, Jian, Skolnick, Jeffrey, Cheng, Jianlin
Published in Nature communications (15.11.2022)

Get full text

Journal Article

DISTEMA: distance map-based estimation of single protein model accuracy with attentive 2D convolutional neural network

DISTEMA: distance map-based estimation of single protein model accuracy with attentive 2D convolutional neural network

by Chen, Xiao, Cheng, Jianlin
Published in BMC bioinformatics (19.04.2022)

Get full text

Journal Article

A Deep Learning Network Approach to ab initio Protein Secondary Structure Prediction

A Deep Learning Network Approach to ab initio Protein Secondary Structure Prediction

by Spencer, Matt, Eickholt, Jesse, Jianlin Cheng
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.01.2015)

Get full text

Journal Article

VEHiCLE: a Variationally Encoded Hi-C Loss Enhancement algorithm for improving and generating Hi-C data

VEHiCLE: a Variationally Encoded Hi-C Loss Enhancement algorithm for improving and generating Hi-C data

by Highsmith, Max, Cheng, Jianlin
Published in Scientific reports (23.04.2021)

Get full text

Journal Article

ClusterTAD: an unsupervised machine learning approach to detecting topologically associated domains of chromosomes from Hi-C data

ClusterTAD: an unsupervised machine learning approach to detecting topologically associated domains of chromosomes from Hi-C data

by Oluwadare, Oluwatosin, Cheng, Jianlin
Published in BMC bioinformatics (14.11.2017)

Get full text

Journal Article

Improving Protein Fold Recognition by Deep Learning Networks

Improving Protein Fold Recognition by Deep Learning Networks

by Jo, Taeho, Hou, Jie, Eickholt, Jesse, Cheng, Jianlin
Published in Scientific reports (04.12.2015)

Get full text

Journal Article

A machine learning information retrieval approach to protein fold recognition

A machine learning information retrieval approach to protein fold recognition

by Cheng, Jianlin, Baldi, Pierre
Published in Bioinformatics (15.06.2006)

Get full text

Journal Article

A deep auto-encoder model for gene expression prediction

A deep auto-encoder model for gene expression prediction

by Xie, Rui, Wen, Jia, Quitadamo, Andrew, Cheng, Jianlin, Shi, Xinghua
Published in BMC genomics (17.11.2017)

Get full text

Journal Article

FeOOH decorated CoP porous nanofiber for enhanced oxygen evolution activity

FeOOH decorated CoP porous nanofiber for enhanced oxygen evolution activity

by Cheng, Jianlin, Shen, Baoshou, Song, Yuyan, Liu, Jiang, Ye, Qing, Mao, Mao, Cheng, Yongliang
Published in Chemical engineering journal (Lausanne, Switzerland : 1996) (15.01.2022)

Get full text

Journal Article

Four-Dimensional Chromosome Structure Prediction

Four-Dimensional Chromosome Structure Prediction

by Highsmith, Max, Cheng, Jianlin
Published in International journal of molecular sciences (10.09.2021)

Get full text

Journal Article

Improved residue contact prediction using support vector machines and a large feature set

Improved residue contact prediction using support vector machines and a large feature set

by Cheng, Jianlin, Baldi, Pierre
Published in BMC bioinformatics (02.04.2007)

Get full text

Journal Article

1
2
3
4
5
6
7
8
9
10
11
Next
[20]