Co-activation of super-enhancer-driven CCAT1 by TP63 and SOX2 promotes squamous cancer progression
Jiang, Yuan, Jiang, Yan-Yi, Xie, Jian-Jun, Mayakonda, Anand, Hazawa, Masaharu, Chen, Li, Xiao, Jin-Fen, Li, Chun-Quan, Huang, Mo-Li, Ding, Ling-Wen, Sun, Qiao-Yang, Xu, Liang, Kanojia, Deepika, Jeitany, Maya, Deng, Jian-Wen, Liao, Lian-Di, Soukiasian, Harmik J., Berman, Benjamin P., Hao, Jia-Jie, Xu, Li-Yan, Li, En-Min, Wang, Ming-Rong, Bi, Xin-Gang, Lin, De-Chen, Koeffler, H. Phillip
Published in Nature communications (06.09.2018)
Published in Nature communications (06.09.2018)
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Identification of distinct mutational patterns and new driver genes in oesophageal squamous cell carcinomas and adenocarcinomas
Lin, De-Chen, Dinh, Huy Q, Xie, Jian-Jun, Mayakonda, Anand, Silva, Tiago Chedraoui, Jiang, Yan-Yi, Ding, Ling-Wen, He, Jian-Zhong, Xu, Xiu-E, Hao, Jia-Jie, Wang, Ming-Rong, Li, Chunquan, Xu, Li-Yan, Li, En-Min, Berman, Benjamin P, Phillip Koeffler, H
Published in Gut (01.10.2018)
Published in Gut (01.10.2018)
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Super-Enhancers Promote Transcriptional Dysregulation in Nasopharyngeal Carcinoma
Yuan, Jiang, Jiang, Yan-Yi, Mayakonda, Anand, Huang, Moli, Ding, Ling-Wen, Lin, Han, Yu, Fenggang, Lu, Yanan, Loh, Thomas Kwok Seng, Chow, Marilynn, Savage, Samantha, Tyner, Jeffrey W, Lin, De-Chen, Koeffler, H Phillip
Published in Cancer research (Chicago, Ill.) (01.12.2017)
Published in Cancer research (Chicago, Ill.) (01.12.2017)
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Interplay and cooperation between SREBF1 and master transcription factors regulate lipid metabolism and tumor-promoting pathways in squamous cancer
Li, Li-Yan, Yang, Qian, Jiang, Yan-Yi, Yang, Wei, Jiang, Yuan, Li, Xiang, Hazawa, Masaharu, Zhou, Bo, Huang, Guo-Wei, Xu, Xiu-E, Gery, Sigal, Zhang, Ying, Ding, Ling-Wen, Ho, Allen S., Zumsteg, Zachary S., Wang, Ming-Rong, Fullwood, Melissa J., Freedland, Stephen J., Meltzer, Stephen J., Xu, Li-Yan, Li, En-Min, Koeffler, H. Phillip, Lin, De-Chen
Published in Nature communications (16.07.2021)
Published in Nature communications (16.07.2021)
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Genomic and molecular characterization of esophageal squamous cell carcinoma
Lin, De-Chen, Hao, Jia-Jie, Nagata, Yasunobu, Xu, Liang, Shang, Li, Meng, Xuan, Sato, Yusuke, Okuno, Yusuke, Varela, Ana Maria, Ding, Ling-Wen, Garg, Manoj, Liu, Li-Zhen, Yang, Henry, Yin, Dong, Shi, Zhi-Zhou, Jiang, Yan-Yi, Gu, Wen-Yue, Gong, Ting, Zhang, Yu, Xu, Xin, Kalid, Ori, Shacham, Sharon, Ogawa, Seishi, Wang, Ming-Rong, Koeffler, H Phillip
Published in Nature genetics (01.05.2014)
Published in Nature genetics (01.05.2014)
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Spatial intratumoral heterogeneity and temporal clonal evolution in esophageal squamous cell carcinoma
Hao, Jia-Jie, Lin, De-Chen, Dinh, Huy Q, Mayakonda, Anand, Jiang, Yan-Yi, Chang, Chen, Jiang, Ye, Lu, Chen-Chen, Shi, Zhi-Zhou, Xu, Xin, Zhang, Yu, Cai, Yan, Wang, Jin-Wu, Zhan, Qi-Min, Wei, Wen-Qiang, Berman, Benjamin P, Wang, Ming-Rong, Koeffler, H Phillip
Published in Nature genetics (01.12.2016)
Published in Nature genetics (01.12.2016)
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A pan-cancer analysis of CpG Island gene regulation reveals extensive plasticity within Polycomb target genes
Zheng, Yueyuan, Huang, Guowei, Silva, Tiago C., Yang, Qian, Jiang, Yan-Yi, Koeffler, H. Phillip, Lin, De-Chen, Berman, Benjamin P.
Published in Nature communications (30.04.2021)
Published in Nature communications (30.04.2021)
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ROCK‐dependent phosphorylation of NUP62 regulates p63 nuclear transport and squamous cell carcinoma proliferation
Hazawa, Masaharu, Lin, De‐Chen, Kobayashi, Akiko, Jiang, Yan‐Yi, Xu, Liang, Dewi, Firli Rahmah Primula, Mohamed, Mahmoud Shaaban, Hartono, Nakada, Mitsutoshi, Meguro‐Horike, Makiko, Horike, Shin‐ichi, Koeffler, H Phillip, Wong, Richard W
Published in EMBO reports (01.01.2018)
Published in EMBO reports (01.01.2018)
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Bromodomain and extraterminal proteins foster the core transcriptional regulatory programs and confer vulnerability in liposarcoma
Chen, Ye, Xu, Liang, Mayakonda, Anand, Huang, Mo-Li, Kanojia, Deepika, Tan, Tuan Zea, Dakle, Pushkar, Lin, Ruby Yu-Tong, Ke, Xin-Yu, Said, Jonathan W., Chen, Jianxiang, Gery, Sigal, Ding, Ling-Wen, Jiang, Yan-Yi, Pang, Angela, Puhaindran, Mark Edward, Goh, Boon Cher, Koeffler, H. Phillip
Published in Nature communications (22.03.2019)
Published in Nature communications (22.03.2019)
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Disease-specific alteration of karyopherin-α subtype establishes feed-forward oncogenic signaling in head and neck squamous cell carcinoma
Hazawa, Masaharu, Sakai, Kie, Kobayashi, Akiko, Yoshino, Hironori, Iga, Yoshihiro, Iwashima, Yuki, Lim, Kee Sing, Chih-Cheng Voon, Dominic, Jiang, Yan-Yi, Horike, Shin-ichi, Lin, De-Chen, Wong, Richard W.
Published in Oncogene (01.03.2020)
Published in Oncogene (01.03.2020)
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Lineage-specific epigenomic and genomic activation of oncogene HNF4A promotes gastrointestinal adenocarcinomas
Pan, Jian, Silva, Tiago C, Gull, Nicole, Yang, Qian, Plummer, Jasmine T, Chen, Stephanie, Daigo, Kenji, Hamakubo, Takao, Gery, Sigal, Ding, Ling-Wen, Jiang, Yan-Yi, Hu, Shaoyan, Xu, Li-Yan, Li, En-Min, Ding, Yanbing, Klempner, Samuel J, Gayther, Simon A, Berman, Benjamin P, Koeffler, H Phillip, Lin, De-Chen
Published in Cancer research (Chicago, Ill.) (01.07.2020)
Published in Cancer research (Chicago, Ill.) (01.07.2020)
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Non-malignant epithelial cells preferentially proliferate from nasopharyngeal carcinoma biopsy cultured under conditionally reprogrammed conditions
Yu, Fenggang, Lu, Yanan, Tao, Lin, Jiang, Yan-Yi, Lin, De-Chen, Wang, Lingzhi, Petersson, Fredrik, Yoshiyama, Hironori, Koeffler, Phillip H., Goh, Boon-Cher, Loh, Kwok Seng
Published in Scientific reports (12.12.2017)
Published in Scientific reports (12.12.2017)
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Reciprocal inhibition between TP63 and STAT1 regulates anti-tumor immune response through interferon-γ signaling in squamous cancer
Jiang, Yuan, Zheng, Yueyuan, Zhang, Yuan-Wei, Kong, Shuai, Dong, Jinxiu, Wang, Fei, Ziman, Benjamin, Gery, Sigal, Hao, Jia-Jie, Zhou, Dan, Zhou, Jianian, Ho, Allen S., Sinha, Uttam K., Chen, Jian, Zhang, Shuo, Yin, Chuntong, Wei, Dan-Dan, Hazawa, Masaharu, Pan, Huaguang, Lu, Zhihao, Wei, Wen-Qiang, Wang, Ming-Rong, Koeffler, H. Phillip, Lin, De-Chen, Jiang, Yan-Yi
Published in Nature communications (20.03.2024)
Published in Nature communications (20.03.2024)
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The c‐MYC–BMI1 axis is essential for SETDB1‐mediated breast tumourigenesis
Xiao, Jin‐Fen, Sun, Qiao‐Yang, Ding, Ling‐Wen, Chien, Wenwen, Liu, Xin‐Yu, Mayakonda, Anand, Jiang, Yan‐Yi, Loh, Xin‐Yi, Ran, Xue‐Bin, Doan, Ngan B, Castor, Brandon, Chia, David, Said, Jonathan W, Tan, Kar Tong, Yang, Henry, Fu, Xin‐Yuan, Lin, De‐Chen, Koeffler, H Phillip
Published in The Journal of pathology (01.09.2018)
Published in The Journal of pathology (01.09.2018)
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Sequestosome 1 protects esophageal squamous carcinoma cells from apoptosis via stabilizing SKP2 under serum starvation condition
Shi, Chao, Pan, Bei-Qing, Shi, Feng, Xie, Zhi-Hui, Jiang, Yan-Yi, Shang, Li, Zhang, Yu, Xu, Xin, Cai, Yan, Hao, Jia-Jie, Wang, Ming-Rong
Published in Oncogene (01.06.2018)
Published in Oncogene (01.06.2018)
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Mutational Landscape of Pediatric Acute Lymphoblastic Leukemia
Ding, Ling-Wen, Sun, Qiao-Yang, Tan, Kar-Tong, Chien, Wenwen, Mayakonda, Anand, Yeoh, Allen Eng Juh, Kawamata, Norihiko, Nagata, Yasunobu, Xiao, Jin-Fen, Loh, Xin-Yi, Lin, De-Chen, Garg, Manoj, Jiang, Yan-Yi, Xu, Liang, Lim, Su-Lin, Liu, Li-Zhen, Madan, Vikas, Sanada, Masashi, Fernández, Lucia Torres, Hema Preethi, S S, Lill, Michael, Kantarjian, Hagop M, Kornblau, Steven M, Miyano, Satoru, Liang, Der-Cherng, Ogawa, Seishi, Shih, Lee-Yung, Yang, Henry, Koeffler, H Phillip
Published in Cancer research (Chicago, Ill.) (15.01.2017)
Published in Cancer research (Chicago, Ill.) (15.01.2017)
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Perioperative immunotherapy for esophageal squamous cell carcinoma
Wei, Dan D, Fang, Jin M, Wang, Huan Z, Chen, Jian, Kong, Shuai, Jiang, Yan-Yi, Jiang, Yuan
Published in Frontiers in immunology (19.02.2024)
Published in Frontiers in immunology (19.02.2024)
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Super-enhancer-mediated core regulatory circuitry in human cancer
Jiang, Yuan, Jiang, Yan-Yi, Lin, De-Chen
Published in Computational and structural biotechnology journal (01.01.2021)
Published in Computational and structural biotechnology journal (01.01.2021)
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Publisher Correction: A pan-cancer analysis of CpG Island gene regulation reveals extensive plasticity within Polycomb target genes
Zheng, Yueyuan, Huang, Guowei, Silva, Tiago C., Yang, Qian, Jiang, Yan-Yi, Koeffler, H. Phillip, Lin, De-Chen, Berman, Benjamin P.
Published in Nature communications (28.06.2021)
Published in Nature communications (28.06.2021)
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Calreticulin promotes migration and invasion of esophageal cancer cells by upregulating neuropilin-1 expression via STAT5A
Shi, Feng, Shang, Li, Pan, Bei-Qing, Wang, Xiao-Min, Jiang, Yan-Yi, Hao, Jia-Jie, Zhang, Yu, Cai, Yan, Xu, Xin, Zhan, Qi-Min, Wang, Ming-Rong
Published in Clinical cancer research (01.12.2014)
Published in Clinical cancer research (01.12.2014)
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