BALANCER: bandwidth allocation and cache partitioning for multicore processors
Navarro-Torres, Agustín, Alastruey-Benedé, Jesús, Ibáñez, Pablo, Viñals-Yúfera, Víctor
Published in The Journal of supercomputing (01.06.2023)
Published in The Journal of supercomputing (01.06.2023)
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Journal Article
Expanding the Limits of Computer-Assisted Sperm Analysis through the Development of Open Software
Yániz, Jesús, Alquézar-Baeta, Carlos, Yagüe-Martínez, Jorge, Alastruey-Benedé, Jesús, Palacín, Inmaculada, Boryshpolets, Sergii, Kholodnyy, Vitaliy, Gadêlha, Hermes, Pérez-Pe, Rosaura
Published in Biology (Basel, Switzerland) (01.08.2020)
Published in Biology (Basel, Switzerland) (01.08.2020)
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Journal Article
GenArchBench: A genomics benchmark suite for arm HPC processors
López-Villellas, Lorién, Langarita-Benítez, Rubén, Badouh, Asaf, Soria-Pardos, Víctor, Aguado-Puig, Quim, López-Paradís, Guillem, Doblas, Max, Setoain, Javier, Kim, Chulho, Ono, Makoto, Armejach, Adrià, Marco-Sola, Santiago, Alastruey-Benedé, Jesús, Ibáñez, Pablo, Moretó, Miquel
Published in Future generation computer systems (01.08.2024)
Published in Future generation computer systems (01.08.2024)
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Journal Article
Berti: an Accurate Local-Delta Data Prefetcher
Navarro-Torres, Agustin, Panda, Biswabandan, Alastruey-Benede, Jesus, Ibanez, Pablo, Vinals-Yufera, Victor, Ros, Alberto
Published in 2022 55th IEEE/ACM International Symposium on Microarchitecture (MICRO) (01.10.2022)
Published in 2022 55th IEEE/ACM International Symposium on Microarchitecture (MICRO) (01.10.2022)
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Conference Proceeding
Accelerating Sequence Alignments Based on FM-Index Using the Intel KNL Processor
Herruzo, Jose M., Gonzalez-Navarro, Sonia, Ibanez-Marin, Pablo, Vinals-Yufera, Victor, Alastruey-Benede, Jesus, Plata, Oscar
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2020)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2020)
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Journal Article
A fault-tolerant last level cache for CMPs operating at ultra-low voltage
Ferrerón, Alexandra, Alastruey-Benedé, Jesús, Suárez Gracia, Darío, Monreal Arnal, Teresa, Ibáñez Marín, Pablo, Viñals Yúfera, Víctor
Published in Journal of parallel and distributed computing (01.03.2019)
Published in Journal of parallel and distributed computing (01.03.2019)
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Journal Article
Publication
Accelerating Sparse Arithmetic in the Context of Newton’s Method for Small Molecules with Bond Constraints
Mikkelsen, Carl Christian Kjelgaard, Alastruey-Benedé, Jesús, Ibáñez-Marín, Pablo, Risueño, Pablo García
Published in Parallel Processing and Applied Mathematics (2016)
Published in Parallel Processing and Applied Mathematics (2016)
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Book Chapter
Conference Proceeding
Accurate and efficient constrained molecular dynamics of polymers using Newton's method and special purpose code
López-Villellas, Lorién, Kjelgaard Mikkelsen, Carl Christian, Galano-Frutos, Juan José, Marco-Sola, Santiago, Alastruey-Benedé, Jesús, Ibáñez, Pablo, Moretó, Miquel, Sancho, Javier, García-Risueño, Pablo
Published in Computer physics communications (01.07.2023)
Published in Computer physics communications (01.07.2023)
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Journal Article
Boosting Backward Search Throughput for FM-Index Using a Compressed Encoding
Herruzo, Jose M., Gonzalez-Navarro, Sonia, Ibanez, Pablo, Vinals, Victor, Alastruey-Benede, Jesus, Plata, Oscar
Published in 2019 Data Compression Conference (DCC) (01.03.2019)
Published in 2019 Data Compression Conference (DCC) (01.03.2019)
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Conference Proceeding
Block Disabling Characterization and Improvements in CMPs Operating at Ultra-low Voltages
Ferreron, Alexandra, Suarez-Gracia, Dario, Alastruey-Benede, Jesus, Monreal, Teresa, Vinals, Victor
Published in 2014 IEEE 26th International Symposium on Computer Architecture and High Performance Computing (01.10.2014)
Published in 2014 IEEE 26th International Symposium on Computer Architecture and High Performance Computing (01.10.2014)
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Conference Proceeding
Accurate and efficient constrained molecular dynamics of polymers through Newton's method and special purpose code
López-Villellas, Lorién, Carl Christian Kjelgaard Mikkelsen, Galano-Frutos, Juan José, Marco-Sola, Santiago, Alastruey-Benedé, Jesús, Ibáñez, Pablo, Moretó, Miquel, Sancho, Javier, García-Risueño, Pablo
Published in bioRxiv (28.09.2022)
Published in bioRxiv (28.09.2022)
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Paper
Compressed Sparse FM-Index: Fast Sequence Alignment Using Large K-Steps
Langarita, Ruben, Armejach, Adria, Setoain, Javier, Ibanez-Marin, Pablo, Alastruey-Benede, Jesus, Moreto, Miquel
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.01.2022)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.01.2022)
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Journal Article
Concertina: Squeezing in Cache Content to Operate at Near-Threshold Voltage
Ferreron, Alexandra, Suarez-Gracia, Dario, Alastruey-Benede, Jesus, Monreal-Arnal, Teresa, Ibanez, Pablo
Published in IEEE transactions on computers (01.03.2016)
Published in IEEE transactions on computers (01.03.2016)
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Journal Article
Publication
Synchronization Strategies on Many-Core SMT Systems
Navarro-Torres, Agustin, Alastruey-Benede, Jesus, Ibanez-Marin, Pablo, Carpen-Amarie, Maria
Published in 2021 IEEE 33rd International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD) (01.10.2021)
Published in 2021 IEEE 33rd International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD) (01.10.2021)
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Conference Proceeding
RISC-V for Genome Data Analysis: Opportunities and Challenges
Lopez-Villellas, Lorien, Pineda-Sanchez, Esteve, Badouh, Asaf, Marco-Sola, Santiago, Ibanez, Pablo, Alastruey-Benede, Jesus, Moreto, Miquel
Published in 2023 38th Conference on Design of Circuits and Integrated Systems (DCIS) (15.11.2023)
Published in 2023 38th Conference on Design of Circuits and Integrated Systems (DCIS) (15.11.2023)
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Conference Proceeding